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2024-06-01 15:18:56

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome

Number of genes found: 46

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Treponema pallidum subsp. pallidum str. Nichols, Nichols
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
TP0016 ATP-dependent protease LA (lon-1)SubName: Full=ATP-dependent protease LA (Lon-1); SubName: Full=S16 family endopeptidase La; EC=3.4.21.53; chromosome CDS15743 2574 + 0.50272
TP0030 heat shock protein (groEL)RecName: Full=60 kDa chaperonin; AltName: Full=Common antigen; Short=CA; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; AltName: Full=TP4 antigen; Short=TP-4; AltName: Full=TPN60; chromosome CDS38307 1635 + 0.501529
TP0071 ATP-dependent Clp protease subunit B (clpB)RecName: Full=Chaperone protein ClpB; chromosome CDS75906 2637 - 0.498673
TP0072 conserved hypothetical proteinSubName: Full=Glutaredoxin-related protein; SubName: Full=Uncharacterized protein; chromosome CDS78746 273 + 0.487179
TP0098 heat-shock protein, putativeSubName: Full=Heat-shock protein, putative; chromosome CDS106719 651 - 0.602151
TP0100 thioredoxin, putativeSubName: Full=Thioredoxin, putative; SubName: Full=TlpA family thioredoxin-disulfide reductase; EC=1.8.1.9; chromosome CDS108323 603 + 0.548922
TP0101 cytochrome c biogenesis protein (ccdA)SubName: Full=Cytochrome c biogenesis protein (CcdA); SubName: Full=DsbD family disulfide bond dehydrogenase D; chromosome CDS108918 795 + 0.553459
TP0113 Lambda CII stability-governing protein (hflK)RecName: Full=Protein HflK; chromosome CDS129892 987 + 0.466059
TP0114 Lambda CII stability-governing protein (hflC)RecName: Full=Protein HflC; chromosome CDS130883 996 + 0.495984
TP0184 small protein (smpB)RecName: Full=SsrA-binding protein; chromosome CDS200523 405 - 0.567901
TP0215 grpE protein (grpE)RecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; chromosome CDS217969 663 + 0.576169
TP0216 heat shock protein 70 (dnaK)RecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; chromosome CDS218747 1908 + 0.515723
TP0330 cell division protein, putativeSubName: Full=AAA family ATPase; SubName: Full=Cell division protein, putative; chromosome CDS351986 1797 - 0.458542
TP0349 peptidyl-prolyl cis-trans isomerase, FKBP-type (slyD)RecName: Full=FKBP-type peptidyl-prolyl cis-trans isomerase SlyD; Short=PPIase; EC=5.2.1.8; AltName: Full=Metallochaperone SlyD; chromosome CDS373895 531 - 0.576271
TP0506 trigger factor (tig)RecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; chromosome CDS541131 1329 + 0.542513
TP0507 ATP-dependent Clp protease proteolytic component (clpP-1)RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 1; chromosome CDS542452 612 + 0.529412
TP0508 ATP-dependent Clp protease subunit X (clpX)RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; chromosome CDS543050 1248 + 0.485577
TP0509 alkyl hydroperoxide reductase (ahpC)SubName: Full=Alkyl hydroperoxide reductase (AhpC); SubName: Full=Peroxiredoxin; EC=1.11.1.15; chromosome CDS544394 567 + 0.513228
TP0524 ATP-dependent protease LA (lon-2)RecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; chromosome CDS564652 2646 - 0.520408
TP0546 periplasmic serine protease, putativeSubName: Full=Periplasmic serine protease, putative; SubName: Full=S1B subfamily peptidase; chromosome CDS588693 2001 - 0.551724
TP0549 ATPase (clpC)SubName: Full=ATPase (ClpC); SubName: Full=S14 family endopeptidase ClpA; EC=3.4.21.92; chromosome CDS593081 2445 + 0.552556
TP0563 T. pallidum predicted coding region TP0563SubName: Full=Uncharacterized protein; chromosome CDS610639 414 + 0.557971
TP0611 ABC transporter, ATP-binding proteinSubName: Full=ABC superfamily ATP binding cassette transporter, ABC protein; SubName: Full=ABC transporter, ATP-binding protein; chromosome CDS663469 780 + 0.547436
TP0612 conserved hypothetical proteinSubName: Full=ABC superfamily ATP binding cassette transporter, membrane protein; SubName: Full=Uncharacterized protein; chromosome CDS664329 1440 + 0.520833
TP0613 conserved hypothetical proteinSubName: Full=ABC superfamily ATP binding cassette transporter, membrane protein; SubName: Full=Uncharacterized protein; chromosome CDS665795 1149 + 0.528285
TP0633 protein-methionine-S-oxide reductase (msrA)RecName: Full=Peptide methionine sulfoxide reductase MsrB/MsrA; Includes: RecName: Full=Peptide methionine sulfoxide reductase MsrB; EC=1.8.4.12; AltName: Full=Peptide-methionine (R)-S-oxide reductase; Includes: RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase; chromosome CDS691387 876 + 0.531963
TP0680 o-sialoglycoprotein endopeptidase (gcp)RecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; chromosome CDS743909 1059 - 0.528801
TP0765 cell division protein (ftsH)RecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; chromosome CDS828372 1830 - 0.529508
TP0773 periplasmic serine protease DO (htrA-1)SubName: Full=Periplasmic serine protease DO (HtrA-1); SubName: Full=S1 family peptidase Do; chromosome CDS840597 1197 - 0.557226
TP0801 ATP-dependent Clp protease subunit A (clpA)SubName: Full=ATP-dependent Clp protease subunit A (ClpA); SubName: Full=S14 family endopeptidase ClpA; EC=3.4.21.92; chromosome CDS868364 2430 - 0.488477
TP0814 thioredoxin reductase (trxB)RecName: Full=Thioredoxin reductase; Short=TRXR; EC=1.8.1.9; chromosome CDS882687 924 + 0.531385
TP0841 periplasmic serine protease DO (htrA-2)SubName: Full=Periplasmic serine protease DO (HtrA-2); SubName: Full=S1 family peptidase Do; chromosome CDS913175 1458 - 0.528121
TP0843 heat shock protein, putativeSubName: Full=Heat shock protein, putative; SubName: Full=Uncharacterized protein; chromosome CDS915835 825 - 0.546667
TP0847 T. pallidum predicted coding region TP0847RecName: Full=Uncharacterized protein TP_0847; chromosome CDS918756 336 - 0.502976
TP0862 peptidyl-prolyl cis-trans isomerase, FKBP-type, 22 kDa (fklB)RecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS939418 795 - 0.540881
TP0876 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS952990 666 + 0.524024
TP0919 thioredoxin (trx)RecName: Full=Thioredoxin; Short=Trx; chromosome CDS996173 318 - 0.490566
TP0943 flagellar protein (fliS)SubName: Full=Flagellar protein (FliS); SubName: Full=Flagellar protein FliS; chromosome CDS1025190 447 - 0.512304
TP0947 peptidyl-prolyl cis-trans isomerase, cyclophilin-binding (cyp)RecName: Full=Probable peptidyl-prolyl cis-trans isomerase; Short=PPIase; EC=5.2.1.8; AltName: Full=Rotamase; chromosome CDS1028549 648 - 0.524691
TP0959 T. pallidum predicted coding region TP0959RecName: Full=Uncharacterized protein TP_0959; chromosome CDS1041101 390 - 0.54359
TP0984 heat shock protein 90 (htpG)RecName: Full=Chaperone protein HtpG; AltName: Full=Heat shock protein HtpG; AltName: Full=High temperature protein G; chromosome CDS1066639 1920 - 0.482812
TP0997 protease IV (sppA)SubName: Full=Protease IV (SppA); chromosome CDS1082643 1797 - 0.510295
TP1013 chaperonin (groES)RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; chromosome CDS1104180 267 + 0.479401
TP1016 basic membrane protein (tpn39b)RecName: Full=Basic membrane protein; Flags: Precursor; chromosome CDS1106779 1086 - 0.494475
TP1022 DNA repair protein (sms)RecName: Full=DNA repair protein RadA homolog; AltName: Full=DNA repair protein Sms homolog; chromosome CDS1115044 1368 - 0.497807
TP1041 ATP-dependent Clp protease proteolytic component (clpP-2)RecName: Full=ATP-dependent Clp protease proteolytic subunit 2; EC=3.4.21.92; AltName: Full=Endopeptidase Clp 2; chromosome CDS1137219 714 - 0.47479