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2024-06-10 10:43:14

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome

Number of genes found: 53

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Lactobacillus acidophilus NCFM, NCFM
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA LBA1428 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1415121 408 - 0.294118
NA LBA1581 thioredoxinRecName: Full=Thioredoxin; chromosome CDS1575842 321 - 0.345794
NA LBA1126 peptidyl-prolyl cis-trans isomeraseRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS1104283 600 + 0.345
NA LBA1473 alfa-l-rhamnosidaseSubName: Full=Alfa-l-rhamnosidase; chromosome CDS1457911 2790 - 0.307527
NA LBA0286 prepilin peptidaseSubName: Full=Prepilin peptidase; chromosome CDS286426 690 - 0.255072
NA LBA0279 heat-shock proteinRecName: Full=33 kDa chaperonin; AltName: Full=Heat shock protein 33 homolog; Short=HSP33; chromosome CDS271652 891 + 0.354658
NA LBA1816 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1830493 354 - 0.341808
NA LBA1754 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1788174 297 - 0.37037
NA LBA1047 thiol peroxidase tpxSubName: Full=Thiol peroxidase tpx; EC=1.11.1.-; chromosome CDS1033493 495 - 0.327273
NA LBA1677 conserved domainSubName: Full=Conserved domain; chromosome CDS1698030 684 + 0.350877
NA LBA0405 cochaperoninRecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; chromosome CDS379398 285 + 0.382456
NA LBA0846 trigger factor cell divisionRecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; chromosome CDS828777 1329 + 0.376223
NA LBA0450 ssrA-binding proteinRecName: Full=SsrA-binding protein; chromosome CDS433168 456 + 0.342105
NA LBA1391 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1371416 669 + 0.349776
NA LBA0406 chaperoninRecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; chromosome CDS379705 1629 + 0.411909
NA LBA1564 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS1557517 882 - 0.379819
NA LBA0327 replication proteinSubName: Full=Replication protein; chromosome CDS310053 1101 - 0.318801
NA LBA1652 mucus binding protein precursor; MubSubName: Full=Mucus binding protein; Mub; chromosome CDS1671826 3525 - 0.37078
NA LBA1512 PrtP precursorSubName: Full=PrtP; chromosome CDS1503345 4884 - 0.345414
NA LBA0388 putative glycoprotein endopeptidaseSubName: Full=Putative glycoprotein endopeptidase; chromosome CDS360457 735 + 0.321088
NA LBA0186 pyrrolidone carboxyl peptidaseRecName: Full=Pyrrolidone-carboxylate peptidase; EC=3.4.19.3; AltName: Full=5-oxoprolyl-peptidase; AltName: Full=Pyroglutamyl-peptidase I; Short=PGP-I; Short=Pyrase; chromosome CDS179395 603 + 0.376451
NA LBA1755 ABC transporter ATP-binding proteinSubName: Full=ABC transporter ATP-binding protein; chromosome CDS1788451 231 - 0.333333
NA LBA0161 anaerobic NTP reductase or activator proteinRecName: Full=Anaerobic ribonucleoside-triphosphate reductase-activating protein; EC=1.97.1.-; chromosome CDS155065 714 + 0.352941
NA LBA0439 thioredoxin reductaseRecName: Full=Ferredoxin--NADP reductase; Short=FNR; Short=Fd-NADP(+) reductase; EC=1.18.1.2; chromosome CDS412281 885 - 0.324294
NA LBA0205 heat shock low molecular weightSubName: Full=Heat shock low molecular weight; chromosome CDS201593 426 - 0.36385
NA LBA1901 putative thioredoxinSubName: Full=Putative thioredoxin; chromosome CDS1910008 312 - 0.25641
NA LBA0390 endopeptidaseRecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; chromosome CDS361744 1050 + 0.373333
NA LBA1793 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1813840 1317 - 0.327259
NA LBA0422 thioredoxin reductaseRecName: Full=Thioredoxin; chromosome CDS399539 312 + 0.323718
clpC LBA0283 ATPaseSubName: Full=ATPase; chromosome CDS276367 2478 + 0.361178
clpE LBA1910 ATP-dependent proteaseSubName: Full=ATP-dependent protease; chromosome CDS1919092 2130 - 0.374648
clpE LBA0638 ATP-dependent Clp protease, ATP-binding subunitSubName: Full=ATP-dependent Clp protease, ATP-binding subunit; chromosome CDS623872 2187 - 0.356653
clpP LBA0694 ATP-dependent Clp protease PRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS687349 588 - 0.362245
clpX LBA0847 ATP-dependent proteaseRecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; chromosome CDS830232 1263 + 0.338876
dnaJ LBA1246 heat shock proteinRecName: Full=Chaperone protein DnaJ; chromosome CDS1223717 1155 - 0.398268
dnaK LBA1247 heat shock proteinRecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; chromosome CDS1224955 1845 - 0.388076
ftsH LBA0278 cell division proteinRecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; chromosome CDS269439 2157 + 0.395457
grpE LBA1248 cochaperonin, Hsp70 cofactorRecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; chromosome CDS1226815 585 - 0.348718
hslU LBA0985 ATP dependant protease, ATP binding unit, heatshock proteinRecName: Full=ATP-dependent protease ATPase subunit HslU; AltName: Full=Unfoldase HslU; chromosome CDS959626 1401 + 0.358315
hslV LBA0984 ATP-dependent heat shock proteaseSubName: Full=ATP-dependent heat shock protease; chromosome CDS959090 525 + 0.390476
htpX LBA0096 putative heat shock proteaseRecName: Full=Protease HtpX homolog; EC=3.4.24.-; chromosome CDS96007 897 - 0.400223
htrA LBA0083 putative heat shock related serine proteaseSubName: Full=Putative heat shock related serine protease; EC=3.4.21.-; chromosome CDS85570 1272 + 0.384434
mecA LBA0642 negative regulator genetic competenceSubName: Full=Negative regulator genetic competence; chromosome CDS629300 741 + 0.345479
msrA LBA1374 peptide methionine sulfoxide reductaseRecName: Full=Peptide methionine sulfoxide reductase MsrB; EC=1.8.4.12; AltName: Full=Peptide-methionine (R)-S-oxide reductase; chromosome CDS1350001 438 - 0.438356
msrA LBA1208 peptide methionine sulfoxide reductaseRecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; chromosome CDS1183432 570 + 0.378947
pepO LBA0165 neutral endopeptidaseSubName: Full=Neutral endopeptidase; EC=3.4.-.-; chromosome CDS159007 1953 + 0.366103
pepO LBA1275 neutral endopeptidaseSubName: Full=Neutral endopeptidase; EC=3.4.-.-; chromosome CDS1253006 1944 - 0.36677
prtM LBA1588 PrtM precursorRecName: Full=Foldase protein PrsA; EC=5.2.1.8; Flags: Precursor; chromosome CDS1579825 903 + 0.366556
radA LBA0346 DNA repair proteinRecName: Full=DNA repair protein radA; chromosome CDS326612 1377 + 0.356572
repB LBA0483 putative replication initiator proteinSubName: Full=Putative replication initiator protein; chromosome CDS475046 1083 + 0.311173
repB LBA0027 putative replication initiator proteinSubName: Full=Putative replication initiator protein; chromosome CDS24511 942 + 0.322718
trxB LBA0679 thioredoxin reductaseRecName: Full=Thioredoxin reductase; EC=1.8.1.9; chromosome CDS665984 927 + 0.376483
trxR LBA1898 thioredoxin reductaseRecName: Full=Thioredoxin reductase; EC=1.8.1.9; chromosome CDS1908271 933 - 0.370847