Gene list
Applied filters:
COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome
Number of genes found: 82
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Staphylococcus epidermidis RP62A phage SP-beta | |||||||||
---|---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SERP0611 | serine protease, putative | RecName: Full=Serine protease HtrA-like; EC=3.4.21.-; | chromosome | CDS | 604736 | 1758 | + | 0.324232 |
NA | SERP2422 | lipoprotein, putative | RecName: Full=Uncharacterized lipoprotein SERP2422; Flags: Precursor; | chromosome | CDS | 2481410 | 786 | - | 0.287532 |
NA | SERP0540 | peptidyl-prolyl cis-trans isomerase, cyclophilin-type | RecName: Full=Putative peptidyl-prolyl cis-trans isomerase; Short=PPIase; EC=5.2.1.8; AltName: Full=Rotamase; | chromosome | CDS | 523564 | 594 | + | 0.360269 |
NA | SERP1141 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1178304 | 711 | - | 0.299578 |
NA | SERP1376 | protein export protein PrsA, putative | RecName: Full=Foldase protein PrsA; EC=5.2.1.8; Flags: Precursor; | chromosome | CDS | 1432032 | 978 | + | 0.283231 |
NA | SERP2515 | rhodanese-like domain protein | SubName: Full=Rhodanese-like domain protein; | chromosome | CDS | 2570266 | 1065 | + | 0.323005 |
NA | SERP1499 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1566662 | 225 | - | 0.368889 |
NA | SERP1738 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1777677 | 666 | - | 0.304805 |
NA | SERP1047 | pyridine nucleotide-disulfide oxidoreductase family protein | SubName: Full=Pyridine nucleotide-disulfide oxidoreductase family protein; | chromosome | CDS | 1093085 | 987 | - | 0.323202 |
NA | SERP0671 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 667143 | 237 | - | 0.248945 |
NA | SERP0340 | ABC transporter, ATP-binding protein, MsbA family | SubName: Full=ABC transporter, ATP-binding protein, MsbA family; | chromosome | CDS | 341329 | 1635 | + | 0.321101 |
NA | SERP1481 | aminotransferase, putative | SubName: Full=Aminotransferase, putative; | chromosome | CDS | 1543045 | 1290 | + | 0.322481 |
NA | SERP2111 | thioredoxin, putative | SubName: Full=Thioredoxin, putative; | chromosome | CDS | 2134903 | 327 | - | 0.30581 |
NA | SERP2434 | rhodanese-like domain protein | SubName: Full=Rhodanese-like domain protein; | chromosome | CDS | 2490968 | 1071 | + | 0.311858 |
NA | SERP1007 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1021218 | 261 | - | 0.302682 |
NA | SERP0483 | thioredoxin, putative | SubName: Full=Thioredoxin, putative; | chromosome | CDS | 478402 | 324 | - | 0.320988 |
NA | SERP1292 | serine protease HtrA, putative | SubName: Full=Serine protease HtrA, putative; | chromosome | CDS | 1337253 | 1239 | + | 0.341404 |
NA | SERP1176 | peptidase, U32 family | SubName: Full=Peptidase, U32 family; | chromosome | CDS | 1210189 | 1269 | - | 0.345154 |
NA | SERP1008 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1021490 | 195 | - | 0.312821 |
NA | SERP1277 | thiol peroxidase, putative | RecName: Full=Probable thiol peroxidase; EC=1.11.1.-; | chromosome | CDS | 1321604 | 495 | - | 0.311111 |
NA | SERP1663 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1701381 | 663 | - | 0.321267 |
NA | SERP1508 | thioredoxin, putative | SubName: Full=Thioredoxin, putative; | chromosome | CDS | 1572067 | 249 | - | 0.317269 |
NA | SERP2218 | ADP-ribosylglycohydrolase, putative | SubName: Full=ADP-ribosylglycohydrolase, putative; | chromosome | CDS | 2255022 | 987 | - | 0.345491 |
NA | SERP1661 | metalloendopeptidase, putative, glycoprotease family | RecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; | chromosome | CDS | 1699928 | 1023 | - | 0.335288 |
NA | SERP0371 | exsD protein | RecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG synthase; EC=4.3.99.3; AltName: Full=Queuosine biosynthesis protein QueE; | chromosome | CDS | 368937 | 639 | - | 0.341158 |
NA | SERP0488 | thioredoxin, putative | SubName: Full=Thioredoxin, putative; | chromosome | CDS | 480414 | 297 | + | 0.272727 |
NA | SERP1304 | thioredoxin, putative | SubName: Full=Thioredoxin, putative; | chromosome | CDS | 1354546 | 312 | - | 0.275641 |
NA | SERP0341 | ABC transporter, ATP-binding protein, MsbA family | SubName: Full=ABC transporter, ATP-binding protein, MsbA family; | chromosome | CDS | 342960 | 1695 | + | 0.305605 |
NA | SERP1235 | hemX protein | SubName: Full=HemX protein; | chromosome | CDS | 1270261 | 813 | - | 0.247232 |
NA | SERP0916 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 924878 | 468 | + | 0.288462 |
NA | SERP1627 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1653965 | 1380 | + | 0.342029 |
NA | SERP0578 | negative regulator of competence MecA, putative | RecName: Full=Adapter protein MecA; | chromosome | CDS | 572719 | 723 | + | 0.305671 |
NA | SERP2272 | peptide methionine sulfoxide reductase, putative | RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; | chromosome | CDS | 2304937 | 480 | - | 0.358333 |
NA | SERP1226 | type III leader peptidase family protein | SubName: Full=Type III leader peptidase family protein; | chromosome | CDS | 1259069 | 711 | - | 0.264416 |
NA | SERP0522 | NifU domain protein | SubName: Full=NifU domain protein; | chromosome | CDS | 507623 | 243 | - | 0.403292 |
NA | SERP0480 | OsmC/Ohr family protein | RecName: Full=Organic hydroperoxide resistance protein-like 1; | chromosome | CDS | 476297 | 423 | - | 0.371158 |
NA | SERP0066 | conserved hypothetical protein | RecName: Full=UPF0355 protein SERP0066; | chromosome | CDS | 54197 | 408 | - | 0.333333 |
NA | SERP1286 | OsmC/Ohr family protein | SubName: Full=OsmC/Ohr family protein; | chromosome | CDS | 1330053 | 441 | + | 0.319728 |
NA | SERP1540 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1594097 | 561 | + | 0.393939 |
NA | SERP1999 | glutaredoxin, putative | SubName: Full=Glutaredoxin, putative; | chromosome | CDS | 2017873 | 597 | - | 0.324958 |
NA | SERP1177 | peptidase, U32 family | SubName: Full=Peptidase, U32 family; | chromosome | CDS | 1211475 | 924 | - | 0.325758 |
NA | SERP2384 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2433780 | 1107 | + | 0.361337 |
NA | SERP2265 | organic hydroperoxide resistance protein, putative | RecName: Full=Organic hydroperoxide resistance protein-like 2; | chromosome | CDS | 2300398 | 429 | + | 0.368298 |
NA | SERP0150 | cell division protein FtsH, putative | RecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; | chromosome | CDS | 140672 | 2103 | + | 0.358535 |
agrB | SERP1490 | accessory gene regulator protein B | RecName: Full=Accessory gene regulator protein B; EC=3.4.-.-; | chromosome | CDS | 1558381 | 585 | + | 0.282051 |
ahpC | SERP0060 | alkyl hydroperoxide reductase, C subunit | RecName: Full=Alkyl hydroperoxide reductase subunit C; EC=1.11.1.15; AltName: Full=Peroxiredoxin; AltName: Full=Thioredoxin peroxidase; | chromosome | CDS | 47868 | 570 | - | 0.375439 |
ahpF | SERP0059 | alkyl hydroperoxide reductase, F subunit | RecName: Full=Alkyl hydroperoxide reductase subunit F; EC=1.8.1.-; | chromosome | CDS | 46330 | 1524 | - | 0.379921 |
bcp | SERP1400 | bacterioferritin comigratory protein | SubName: Full=Bacterioferritin comigratory protein; | chromosome | CDS | 1464425 | 459 | - | 0.283224 |
clpB | SERP0564 | ATP-dependent Clp protease, ATP-binding subunit ClpB | RecName: Full=Chaperone protein ClpB; | chromosome | CDS | 555678 | 2610 | + | 0.341379 |
clpC | SERP0165 | ATP-dependent Clp protease, ATP-binding subunit ClpC | RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC; | chromosome | CDS | 169002 | 2454 | + | 0.351671 |
clpP | SERP0436 | ATP-dependent Clp protease, proteolytic subunit ClpP | RecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; | chromosome | CDS | 441191 | 585 | + | 0.347009 |
clpX | SERP1238 | ATP-dependent Clp protease, ATP-binding subunit ClpX | RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; | chromosome | CDS | 1273310 | 1263 | - | 0.3365 |
ctaA | SERP0705 | cytochrome oxidase assembly protein | RecName: Full=Heme A synthase; Short=HAS; EC=1.3.-.-; AltName: Full=Cytochrome aa3-controlling protein; | chromosome | CDS | 702756 | 909 | - | 0.328933 |
ctaB | SERP0706 | protoheme IX farnesyltransferase | RecName: Full=Protoheme IX farnesyltransferase; EC=2.5.1.-; AltName: Full=Heme B farnesyltransferase; AltName: Full=Heme O synthase; | chromosome | CDS | 703965 | 912 | + | 0.343202 |
dnaJ | SERP1147 | dnaJ protein | RecName: Full=Chaperone protein DnaJ; | chromosome | CDS | 1183210 | 1122 | - | 0.358289 |
dnaK | SERP1148 | dnaK protein | RecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; | chromosome | CDS | 1184476 | 1830 | - | 0.353552 |
gpxA-1 | SERP0872 | glutathione peroxidase | RecName: Full=Glutathione peroxidase; | chromosome | CDS | 886540 | 477 | - | 0.324948 |
gpxA-2 | SERP2194 | glutathione peroxidase | RecName: Full=Glutathione peroxidase homolog BsaA; EC=1.-.-.-; | chromosome | CDS | 2227609 | 477 | - | 0.280922 |
groEL | SERP1484 | chaperonin, 60 kDa | RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; | chromosome | CDS | 1552090 | 1620 | - | 0.377778 |
groES | SERP1485 | chaperonin, 10 kDa | RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; | chromosome | CDS | 1553765 | 285 | - | 0.347368 |
grpE | SERP1149 | heat shock protein GrpE | RecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; | chromosome | CDS | 1186361 | 633 | - | 0.306477 |
hslO | SERP0151 | chaperonin, 33 kDa | RecName: Full=33 kDa chaperonin; AltName: Full=Heat shock protein 33 homolog; Short=HSP33; | chromosome | CDS | 143029 | 882 | + | 0.378685 |
hslU | SERP0820 | heat shock protein HslVU, ATPase subunit HslU | RecName: Full=ATP-dependent protease ATPase subunit HslU; AltName: Full=Unfoldase HslU; | chromosome | CDS | 824921 | 1404 | + | 0.340456 |
hslV | SERP0819 | heat shock protein HslVU, ATPase subunit HslV | RecName: Full=ATP-dependent protease subunit HslV; EC=3.4.25.2; | chromosome | CDS | 824310 | 543 | + | 0.38674 |
msrA-1 | SERP0931 | peptide methionine sulfoxide reductase | RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; | chromosome | CDS | 948493 | 516 | - | 0.327519 |
msrA-2 | SERP1000 | peptide methionine sulfoxide reductase | RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; | chromosome | CDS | 1015508 | 525 | - | 0.369524 |
msrB | SERP0999 | methionine-R-sulfoxide reductase | RecName: Full=Peptide methionine sulfoxide reductase MsrB; EC=1.8.4.12; AltName: Full=Peptide-methionine (R)-S-oxide reductase; | chromosome | CDS | 1015083 | 429 | - | 0.321678 |
nrdG | SERP2182 | anaerobic ribonucleoside-triphosphate reductase activating protein | RecName: Full=Anaerobic ribonucleoside-triphosphate reductase-activating protein; EC=1.97.1.-; | chromosome | CDS | 2215128 | 537 | - | 0.333333 |
pcp | SERP2317 | pyrrolidone-carboxylate peptidase | SubName: Full=Pyrrolidone-carboxylate peptidase; EC=3.4.19.3; | chromosome | CDS | 2355905 | 639 | + | 0.359937 |
pflA | SERP2365 | pyruvate formate-lyase-activating enzyme | RecName: Full=Pyruvate formate-lyase-activating enzyme; Short=PFL-activating enzyme; EC=1.97.1.4; | chromosome | CDS | 2411378 | 756 | - | 0.349206 |
radA | SERP0166 | DNA repair protein RadA | RecName: Full=DNA repair protein radA; | chromosome | CDS | 171946 | 1374 | + | 0.375546 |
smpB | SERP0451 | SsrA-binding protein | RecName: Full=SsrA-binding protein; | chromosome | CDS | 457127 | 471 | + | 0.352442 |
sufB | SERP0500 | FeS assembly protein SufB | RecName: Full=UPF0051 protein SERP0500; | chromosome | CDS | 489683 | 1398 | + | 0.344778 |
sufC | SERP0496 | FeS assembly ATPase SufC | SubName: Full=FeS assembly ATPase SufC; | chromosome | CDS | 485551 | 762 | + | 0.345144 |
sufD | SERP0497 | FeS assembly protein SufD | SubName: Full=FeS assembly protein SufD; | chromosome | CDS | 486407 | 1308 | + | 0.34633 |
tig | SERP1239 | trigger factor | RecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; | chromosome | CDS | 1274859 | 1302 | - | 0.333333 |
trxA | SERP0728 | thioredoxin | RecName: Full=Thioredoxin; Short=Trx; | chromosome | CDS | 727476 | 315 | + | 0.339683 |
trxB | SERP0432 | thioredoxin-disulfide reductase | RecName: Full=Thioredoxin reductase; Short=TRXR; EC=1.8.1.9; | chromosome | CDS | 436779 | 933 | + | 0.376206 |
ureD | SERP1875 | urease accessory protein UreD | RecName: Full=Urease accessory protein UreD; | chromosome | CDS | 1899070 | 837 | + | 0.32497 |
ureE | SERP1872 | urease accessory protein UreE | RecName: Full=Urease accessory protein UreE; | chromosome | CDS | 1897309 | 453 | + | 0.322296 |
ureF | SERP1873 | urease accessory protein UreF | RecName: Full=Urease accessory protein UreF; | chromosome | CDS | 1897754 | 690 | + | 0.333333 |
ureG | SERP1874 | urease accessory protein UreG | RecName: Full=Urease accessory protein UreG; | chromosome | CDS | 1898456 | 615 | + | 0.354472 |