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2024-06-02 16:22:04

Gene list

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COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome

Number of genes found: 122

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Idiomarina loihiensis L2TR, L2TR
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA IL0537 Possible regulatory protein containing AAA-type ATPase domainSubName: Full=Possible regulatory protein containing AAA-type ATPase domain; chromosome CDS566156 1614 + 0.437423
NA IL0913 Organic radical activating enzymeRecName: Full=7-carboxy-7-deazaguanine synthase; Short=CDG synthase; EC=4.3.99.3; AltName: Full=Queuosine biosynthesis protein QueE; chromosome CDS965040 702 - 0.501424
NA IL1804 Glutaredoxin-related proteinRecName: Full=Glutaredoxin; chromosome CDS1938311 339 - 0.477876
NA IL1464 Thioredoxin related proteinSubName: Full=Thioredoxin related protein; chromosome CDS1576209 450 - 0.493333
NA IL0193 Collagenase family proteaseSubName: Full=Collagenase family protease; chromosome CDS209906 873 + 0.500573
NA IL2576 Peroxiredoxin, AhpC/Tsa familySubName: Full=Peroxiredoxin, AhpC/Tsa family; chromosome CDS2767756 546 - 0.474359
NA IL2069 Thioredoxin related proteinSubName: Full=Thioredoxin related protein; chromosome CDS2205304 339 - 0.486726
NA IL0719 Glutathione S-transferase related proteinSubName: Full=Glutathione S-transferase related protein; chromosome CDS776916 639 - 0.464789
NA IL0623 Glutathione S-transferase related proteinSubName: Full=Glutathione S-transferase related protein; chromosome CDS680232 666 - 0.495495
NA IL1001 Periplasmic parvulin-like peptidyl-prolyl isomeraseSubName: Full=Periplasmic parvulin-like peptidyl-prolyl isomerase; chromosome CDS1066086 1869 - 0.441413
NA IL1722 DnaJ-related proteinSubName: Full=DnaJ-related protein; chromosome CDS1854074 603 - 0.427861
NA IL0080 OsmC-like organic hydroperoxide reductaseSubName: Full=OsmC-like organic hydroperoxide reductase; chromosome CDS86848 420 - 0.488095
NA IL0212 Thioredoxin related proteinSubName: Full=Thioredoxin related protein; chromosome CDS232383 525 - 0.525714
NA IL1525 Two domain methionine sulfoxide reductase (MsrA/SelR)SubName: Full=Two domain methionine sulfoxide reductase (MsrA/SelR); chromosome CDS1638571 1113 + 0.469901
NA IL1098 TPR-containg proteinSubName: Full=TPR-containg protein; chromosome CDS1181970 1209 - 0.46981
NA IL0187 Radical enzyme activating proteinSubName: Full=Radical enzyme activating protein; chromosome CDS202584 474 + 0.514768
NA IL1831 Inactive metal-dependent protease-like proteinSubName: Full=Inactive metal-dependent protease-like protein; chromosome CDS1963355 684 - 0.495614
NA IL2342 Peroxiredoxin, AhpC/Tsa familySubName: Full=Peroxiredoxin, AhpC/Tsa family; chromosome CDS2512878 630 + 0.473016
NA IL0498 Predicted aspartyl proteaseSubName: Full=Predicted aspartyl protease; chromosome CDS523629 423 - 0.465721
NA IL0991 Zn-dependent peptidase, insulinase familySubName: Full=Zn-dependent peptidase, insulinase family; chromosome CDS1048737 2724 + 0.455213
NA IL1264 SelR-like methionine sulfoxide reductaseSubName: Full=SelR-like methionine sulfoxide reductase; chromosome CDS1354424 402 + 0.452736
NA IL2586 Glutathione S-transferase related proteinSubName: Full=Glutathione S-transferase related protein; chromosome CDS2780082 573 - 0.450262
NA IL0248 hypothetical proteinRecName: Full=Fe/S biogenesis protein NfuA; chromosome CDS262065 579 + 0.488774
NA IL1970 Probable O-sialoglycoprotein endopeptidaseRecName: Full=tRNA N6-adenosine threonylcarbamoyltransferase; EC=2.6.99.4; AltName: Full=N6-L-threonylcarbamoyladenine synthase; Short=t(6)A synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaD; chromosome CDS2102114 1035 - 0.501449
NA IL0984 Predicted Zn-dependent protease related to HtpXSubName: Full=Predicted Zn-dependent protease related to HtpX; chromosome CDS1040661 837 - 0.498208
NA IL0181 Collagenase family proteaseSubName: Full=Collagenase family protease; chromosome CDS194081 1299 - 0.498845
NA IL2496 Predicted protein-S-isoprenylcysteine methyltransferaseSubName: Full=Uncharacterized protein; chromosome CDS2674996 462 + 0.467532
NA IL0243 Prolyl 4-hydroxylase alpha subunit homolog, 2OG-Fe(II) oxygenase familySubName: Full=Prolyl 4-hydroxylase alpha subunit homolog, 2OG-Fe(II) oxygenase family; chromosome CDS258414 618 - 0.5
NA IL0211 Protein-disulfide isomeraseSubName: Full=Protein-disulfide isomerase; chromosome CDS231622 732 - 0.441257
NA IL1984 Uncharacterized conserved proteinRecName: Full=Probable Fe(2+)-trafficking protein; chromosome CDS2116158 273 + 0.450549
NA IL2478 Peroxiredoxin, AhpC/Tsa familySubName: Full=Peroxiredoxin, AhpC/Tsa family; chromosome CDS2654650 492 + 0.495935
NA IL2314 OsmC-like predicted redox proteinSubName: Full=OsmC-like predicted redox protein; chromosome CDS2479532 432 - 0.497685
NA IL0689 Glutaredoxin family proteinSubName: Full=Glutaredoxin family protein; chromosome CDS744240 384 - 0.429688
NA IL2238 Predicted molecular chaperoneRecName: Full=Anhydro-N-acetylmuramic acid kinase; EC=2.7.1.170; AltName: Full=AnhMurNAc kinase; chromosome CDS2394020 1110 + 0.492793
NA IL0146 Membrane protease, stomatin/prohibitin familySubName: Full=Membrane protease, stomatin/prohibitin family; chromosome CDS156051 915 + 0.454645
NA IL0161 Secreted subtilisin-like peptidaseSubName: Full=Secreted subtilisin-like peptidase; chromosome CDS169042 2535 + 0.476923
NA IL0192 Collagenase family proteaseSubName: Full=Collagenase family protease; chromosome CDS208908 993 + 0.510574
NA IL0831 Predicted glutathione S-transferaseSubName: Full=Predicted glutathione S-transferase; chromosome CDS887577 963 - 0.462098
NA IL0672 Probable arginyl-tRNA:protein arginylyltransferaseRecName: Full=Putative arginyl-tRNA--protein transferase; Short=Arginyltransferase; Short=R-transferase; EC=2.3.2.8; chromosome CDS727255 729 + 0.449931
NA IL1994 Thioredoxin domain-containing proteinSubName: Full=Thioredoxin domain-containing protein; chromosome CDS2129032 852 + 0.450704
NA IL2345 Uncharacterized conserved secreted proteinSubName: Full=Uncharacterized conserved secreted protein; chromosome CDS2517601 504 - 0.46627
NA IL0213 Thiol:disulfide interchange proteinSubName: Full=Thiol:disulfide interchange protein; chromosome CDS232897 2085 - 0.516067
NA IL1283 Thioredoxin related proteinSubName: Full=Thioredoxin related protein; chromosome CDS1379368 240 + 0.466667
NA IL0162 Secreted subtilisin-like peptidaseSubName: Full=Secreted subtilisin-like peptidase; chromosome CDS171664 1851 - 0.524581
NA IL1229 Membrane associated glutaredoxinSubName: Full=Membrane associated glutaredoxin; chromosome CDS1324796 747 + 0.471218
NA IL0583 Oar-like outer membrane protein protein, OmpA familySubName: Full=Oar-like outer membrane protein protein, OmpA family; chromosome CDS620693 3198 + 0.465291
aat IL0671 Leu/Phe-tRNA-protein transferaseRecName: Full=Leucyl/phenylalanyl-tRNA--protein transferase; EC=2.3.2.6; AltName: Full=L/F-transferase; AltName: Full=Leucyltransferase; AltName: Full=Phenyalanyltransferase; chromosome CDS726545 711 + 0.466948
ahpC IL1803 Peroxiredoxin, AhpC/Tsa familySubName: Full=Peroxiredoxin, AhpC/Tsa family; chromosome CDS1937546 606 - 0.452145
bcp IL1461 Peroxiredoxin, bacterioferritin comigratory proteinSubName: Full=Peroxiredoxin, bacterioferritin comigratory protein; chromosome CDS1573048 471 + 0.428875
ccmA IL1106 ABC-type transport system involved in cytochrome c biogenesis, ATPase componentRecName: Full=Cytochrome c biogenesis ATP-binding export protein CcmA; EC=3.6.3.41; AltName: Full=Heme exporter protein A; chromosome CDS1188237 657 - 0.506849
ccmB IL1105 ABC-type transport system involved in cytochrome c biogenesis, permease componentRecName: Full=Heme exporter protein B; chromosome CDS1187557 684 - 0.502924
ccmC IL1104 ABC-type transport system involved in cytochrome c biogenesis, permease componentSubName: Full=ABC-type transport system involved in cytochrome c biogenesis, permease component; chromosome CDS1186818 738 - 0.48103
ccmE IL1102 Cytochrome c-type biogenesis protein CcmERecName: Full=Cytochrome c-type biogenesis protein CcmE; AltName: Full=Cytochrome c maturation protein E; AltName: Full=Heme chaperone CcmE; chromosome CDS1186122 483 - 0.465839
ccmF IL1101 Cytochrome c biogenesis factorSubName: Full=Cytochrome c biogenesis factor; chromosome CDS1184170 1956 - 0.505112
ccmH IL1099 Cytochrome c-type biogenesis protein CcmHSubName: Full=Cytochrome c-type biogenesis protein CcmH; chromosome CDS1183171 462 - 0.454545
ccoN IL1297 Cbb3-type cytochrome oxidase, subunit 1SubName: Full=Cbb3-type cytochrome oxidase, subunit 1; chromosome CDS1395658 1437 + 0.464161
clpA IL0674 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperonesSubName: Full=ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones; chromosome CDS728281 2271 - 0.470718
clpB IL1181 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperonesSubName: Full=ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones; chromosome CDS1269520 2574 - 0.473582
clpP IL1005 Protease subunit of ATP-dependent Clp proteaseRecName: Full=ATP-dependent Clp protease proteolytic subunit; EC=3.4.21.92; AltName: Full=Endopeptidase Clp; chromosome CDS1072432 621 - 0.463768
clpX IL1004 ATP-dependent protease Clp, ATPase subunitRecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX; chromosome CDS1071132 1272 - 0.446541
comM IL0215 Competence related ATPase with chaperone activitySubName: Full=Competence related ATPase with chaperone activity; chromosome CDS235592 1548 + 0.501938
coxG IL0258 Cytochrome c oxidase assembly proteinSubName: Full=Cytochrome c oxidase assembly protein; chromosome CDS271505 570 - 0.473684
ctaA IL0254 Uncharacterized protein required for cytochrome oxidase assemblySubName: Full=Uncharacterized protein required for cytochrome oxidase assembly; chromosome CDS268114 990 - 0.487879
cyoE IL0253 PolyprenyltransferaseRecName: Full=Protoheme IX farnesyltransferase; EC=2.5.1.-; AltName: Full=Heme B farnesyltransferase; AltName: Full=Heme O synthase; chromosome CDS267204 897 - 0.507246
degQ IL0411 Periplasmic trypsin-like serine proteaseSubName: Full=Periplasmic trypsin-like serine protease; chromosome CDS426230 1356 - 0.487463
degS IL0410 Periplasmic trypsin-like serine proteaseSubName: Full=Periplasmic trypsin-like serine protease; chromosome CDS425117 1050 - 0.466667
djlA IL2226 DnaJ-domain containing proteinSubName: Full=DnaJ-domain containing protein; chromosome CDS2379897 831 - 0.493381
dnaJ IL0985 DnaJ molecular chaperoneRecName: Full=Chaperone protein DnaJ; chromosome CDS1041547 1155 - 0.483983
dnaK IL0986 Molecular chaperone (HSP70)RecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName: Full=Heat shock 70 kDa protein; AltName: Full=Heat shock protein 70; chromosome CDS1042804 1929 - 0.470192
dsbA IL2571 Probable disulfide isomeraseRecName: Full=Thiol:disulfide interchange protein; chromosome CDS2762636 615 - 0.456911
dsbB IL1822 Disulfide bond formation proteinRecName: Full=Disulfide bond formation protein B; AltName: Full=Disulfide oxidoreductase; chromosome CDS1956272 546 + 0.485348
dsbC IL0825 Protein-disulfide isomeraseSubName: Full=Protein-disulfide isomerase; chromosome CDS881542 732 - 0.484973
dsbD IL2283 Thiol:disulfide interchange protein, membrane-associated protein disulphide isomeraseRecName: Full=Thiol:disulfide interchange protein DsbD; EC=1.8.1.8; AltName: Full=Protein-disulfide reductase; Short=Disulfide reductase; Flags: Precursor; chromosome CDS2446074 1707 + 0.480961
dsbE IL1100 Probable disulfide isomeraseSubName: Full=Probable disulfide isomerase; chromosome CDS1183629 549 - 0.48816
fkpA IL2309 FKBP-type peptidyl-prolyl cis-trans isomeraseRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS2475651 741 - 0.445344
flgA IL1150 Flagellar basal body P-ring biosynthesis proteinSubName: Full=Flagellar basal body P-ring biosynthesis protein; chromosome CDS1230076 723 + 0.455048
flgJ IL1139 Flagellum-specific muramidaseSubName: Full=Flagellum-specific muramidase; chromosome CDS1220474 978 - 0.519427
fliJ IL1196 Flagellar biosynthesis chaperoneSubName: Full=Flagellar biosynthesis chaperone; chromosome CDS1284190 444 - 0.459459
fliS IL1133 Flagellin-specific chaperone FliSSubName: Full=Flagellin-specific chaperone FliS; chromosome CDS1213041 423 - 0.446809
glnD IL0847 UTP:GlnB (protein PII) uridylyltransferaseRecName: Full=Bifunctional uridylyltransferase/uridylyl-removing enzyme; Short=UTase/UR; AltName: Full=Bifunctional [protein-PII] modification enzyme; AltName: Full=Bifunctional nitrogen sensor protein; Includes: RecName: Full=[Protein-PII] uridylyltransferase; Short=PII uridylyltransferase; Short=UTase; EC=2.7.7.59; Includes: RecName: Full=[Protein-PII]-UMP uridylyl-removing enzyme; Short=UR; EC=3.1.4.-; chromosome CDS903553 2640 + 0.475
glnE IL1959 Glutamine synthetase adenylyltransferaseRecName: Full=Glutamate-ammonia-ligase adenylyltransferase; EC=2.7.7.42; AltName: Full=Glutamine-synthetase adenylyltransferase; Short=ATase; AltName: Full=[Glutamate--ammonia-ligase] adenylyltransferase; chromosome CDS2087038 2847 - 0.48156
groL IL2280 Chaperonin GroEL (HSP60 family)RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60; chromosome CDS2443598 1647 - 0.490589
groS IL2281 Co-chaperonin GroES (HSP10)RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10; chromosome CDS2445302 291 - 0.463918
grpE IL0987 Molecular chaperone GrpE (heat shock protein)RecName: Full=Protein GrpE; AltName: Full=HSP-70 cofactor; chromosome CDS1044838 666 - 0.477477
grxA IL1366 GlutaredoxinSubName: Full=Glutaredoxin; chromosome CDS1468213 267 + 0.434457
gst IL0046 Glutathione S-transferaseSubName: Full=Glutathione S-transferase; chromosome CDS50016 639 - 0.489828
hflB IL0975 Membrane ATP-dependent Zn proteasesRecName: Full=ATP-dependent zinc metalloprotease FtsH; EC=3.4.24.-; chromosome CDS1029748 1947 - 0.475603
hflC IL0336 Membrane protease, stomatin/prohibitin familyRecName: Full=Protein HflC; chromosome CDS345658 894 + 0.449664
hflK IL0335 Membrane protease, stomatin/prohibitin familySubName: Full=Membrane protease, stomatin/prohibitin family; chromosome CDS344504 1155 + 0.474459
hslO IL2029 Redox-responsive chaperonin Hsp33SubName: Full=Redox-responsive chaperonin Hsp33; chromosome CDS2171692 825 + 0.486061
hslU IL2457 ATP-dependent protease HslVU (ClpYQ), ATPase subunitRecName: Full=ATP-dependent protease ATPase subunit HslU; AltName: Full=Unfoldase HslU; chromosome CDS2630090 1353 - 0.478197
hslV IL2458 ATP-dependent protease HslVU (ClpYQ), peptidase subunitRecName: Full=ATP-dependent protease subunit HslV; EC=3.4.25.2; chromosome CDS2631444 558 - 0.503584
htpG IL1846 Molecular chaperone, HSP90 familyRecName: Full=Chaperone protein HtpG; AltName: Full=Heat shock protein HtpG; AltName: Full=High temperature protein G; chromosome CDS1977145 1914 - 0.463427
htpX IL1320 Zn-dependent protease with chaperone functionRecName: Full=Protease HtpX; EC=3.4.24.-; AltName: Full=Heat shock protein HtpX; chromosome CDS1421123 864 - 0.476852
ibpA IL2544 Molecular chaperone (small heat shock protein)SubName: Full=Molecular chaperone (Small heat shock protein); chromosome CDS2727518 474 + 0.481013
lon IL1003 ATP-dependent Lon proteaseRecName: Full=Lon protease; EC=3.4.21.53; AltName: Full=ATP-dependent protease La; chromosome CDS1068686 2325 - 0.458925
lonB IL1288 ATP-dependent serine protease LASubName: Full=ATP-dependent serine protease LA; chromosome CDS1384319 1917 - 0.472613
msrA IL2039 Peptide methionine sulfoxide reductaseRecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; EC=1.8.4.11; AltName: Full=Peptide-methionine (S)-S-oxide reductase; chromosome CDS2181778 546 + 0.468864
osmC IL2550 Organic hydroperoxide reductaseSubName: Full=Organic hydroperoxide reductase; chromosome CDS2734382 423 - 0.470449
pcm IL0748 Protein-L-isoaspartatecarboxylmethyltransferaseRecName: Full=Protein-L-isoaspartate O-methyltransferase; EC=2.1.1.77; AltName: Full=L-isoaspartyl protein carboxyl methyltransferase; AltName: Full=Protein L-isoaspartyl methyltransferase; AltName: Full=Protein-beta-aspartate methyltransferase; Short=PIMT; chromosome CDS808325 642 - 0.501558
pepO IL0461 Secreted zinc metalloproteinaseSubName: Full=Secreted zinc metalloproteinase; chromosome CDS478661 2070 + 0.460386
ppiA IL1866 Peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin familyRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS1994903 591 + 0.433164
ppiB IL1032 Peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin familyRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS1107726 498 - 0.443775
ppiC IL2411 Parvulin-like peptidyl-prolyl isomeraseSubName: Full=Parvulin-like peptidyl-prolyl isomerase; chromosome CDS2585574 279 + 0.473118
ptr IL2336 Secreted Zn-dependent peptidase, insulinase familySubName: Full=Secreted Zn-dependent peptidase, insulinase family; chromosome CDS2501798 2874 + 0.456855
pulO IL0450 Type II pili prepilin peptidase PilD/XcpARecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS465413 861 - 0.511034
sirA IL0009 Predicted redox protein, regulator of disulfide bond formationRecName: Full=Sulfurtransferase TusA homolog; EC=2.8.1.-; chromosome CDS10684 240 - 0.458333
slpA IL1126 FKBP-type peptidyl-prolyl cis-trans isomerasesRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS1205790 441 - 0.480726
slyD IL0821 FKBP-type peptidyl-prolyl cis-trans isomerasesRecName: Full=Peptidyl-prolyl cis-trans isomerase; EC=5.2.1.8; chromosome CDS876595 483 + 0.488613
smpB IL0898 TmRNA-binding proteinRecName: Full=SsrA-binding protein; chromosome CDS954848 480 + 0.477083
sms IL1874 ATP-dependent serine proteaseRecName: Full=DNA repair protein radA; chromosome CDS2003607 1365 - 0.525275
sohB IL1038 Periplasmic serine protease, ClpP familySubName: Full=Periplasmic serine protease, ClpP family; chromosome CDS1114386 999 - 0.418418
sppA IL1329 Periplasmic serine protease, ClpP familyRecName: Full=Protease 4; EC=3.4.21.-; AltName: Full=Endopeptidase IV; AltName: Full=Protease IV; AltName: Full=Signal peptide peptidase; chromosome CDS1429654 1851 + 0.450567
sspA IL0419 Glutathione S-transferase related proteinSubName: Full=Glutathione S-transferase related protein; chromosome CDS433284 624 + 0.445513
sufB_1 IL0154 Cysteine desulfurase activator SufBSubName: Full=Cysteine desulfurase activator SufB; chromosome CDS162762 1437 - 0.488518
sufB_2 IL0152 Cysteine desulfurase activator SufBSubName: Full=Cysteine desulfurase activator SufB; chromosome CDS160753 1251 - 0.508393
sufC IL0153 Cysteine desulfurase activator ATPaseSubName: Full=Cysteine desulfurase activator ATPase; chromosome CDS162000 759 - 0.471673
surA IL2230 Periplasmic parvulin-like peptidyl-prolyl isomerase (two homologous domains)RecName: Full=Chaperone SurA; AltName: Full=Peptidyl-prolyl cis-trans isomerase SurA; Short=PPIase SurA; EC=5.2.1.8; AltName: Full=Rotamase SurA; Flags: Precursor; chromosome CDS2384830 1299 + 0.464973
tig IL1006 Trigger factorRecName: Full=Trigger factor; Short=TF; EC=5.2.1.8; AltName: Full=PPIase; chromosome CDS1073152 1302 - 0.439324
trxA IL2362 ThioredoxinRecName: Full=Thioredoxin; chromosome CDS2533440 327 - 0.412844
trxB IL0670 Thioredoxin reductaseRecName: Full=Thioredoxin reductase; EC=1.8.1.9; chromosome CDS725576 960 + 0.501042
trxC IL0066 Thioredoxin related proteinSubName: Full=Thioredoxin related protein; chromosome CDS68880 429 + 0.438228