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COG category: NOT ANALYZED
Genomic element: chromosome

Number of genes found: 54

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# Tropheryma whipplei str. Twist, twist

>TWTRNA42 tRNA-Phe
GGCTCTGTAGCTCAGTTGGTAGAGCGTTCGACTGAAAATCGAAAGGTCAC
CGGATCGATACCGGTCGGAGCCACAA
>TWTRNA26 tRNA-Gly
GCGGATGTGGCGCAGTGGTAGCGCATCACCTTGCCAAGGTGAGGGTCGCG
AGTTCGAATCTCGTCATCCGCT
>TWTRNA37 tRNA-Asp
GGCCCTGTGGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCG
CGGGTTCGAGTCCCGTCAGGGTCG
>TWTRNA39 tRNA-Gln
TCCGCTTTGGTGTAACGGCAGCACAGCAGCCTTTGGAGCTGTTGGTCTAG
GTTCGAATCCTAGAGGCGGAG
>TWTRNA32 tRNA-Ala
GGGGCTGTGGCGCAGCTGGTAGCGCATCTGCATGGCATGCAGAGGGTCGG
GGGTTCGAGTCCCCTCAGCTCCACCC
>TWTRNA07 tRNA-Ser
GGTAGCGTGTCTGAGTGGCCGAAAGAGCGCGCCTCGAAAGCGCGTGAGCG
CACCTGTGCTCCGTGGGTTCAAATCCCACCGCTACCG
>TWTRNA47 tRNA-Trp
AGGGCGGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGC
AGGTTCAAGTCCTGTCCGCCCTG
>TWTRNA51 tRNA-Ser
GGAGGATTCGCCTAGTGGCCTATGGCGCGCGCTTGGAAAGCGCGTTGGGT
GCAAGCCCTCAGGGGTTCGAATCCCCTATCCTCCG
>TWTRNA09 tRNA-Asp
GGCCCTGTGGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCG
CGGGTTCGAGTCCCGTCAGGGTCG
>TWTRNA10 tRNA-Glu
GGCCCCATCGTCTAGAGGCCTAGGACCCCGCCCTTTCACGGCGGTAGCAC
GGGTTCAAATCCCGTTGGGGTCACCC
>TWTRNA29 tRNA-Val
GGGCGATTGGCGCAGTGGTAGCGCGCTTCCTTCACACGGAAGAGGTCACT
GGTTCGAGTCCAGTATCGCCCA
>TWTRNA01 tRNA-Ile
GGGGTTATAGCTCAGATGGTTAGAGCGCTTCACTGATAATGAAGAGGCCC
CAGGTTCAAGTCCTGGTAACCCCA
>TWTRNA48 tRNA-Ser
GGAGGGCTGTCCGAGCGGCCTAAGGAGCCGGTCTTGAAAACCGGTGAGCA
GAGATGCTCCGTGGGTTCAAATCCCACGCCCTCCG
>TWTRNA27 tRNA-Cys
GGTGGCGTGGCCGAGAGGTGAGGCAGCAGCCTGCAAAGCTGTGTACACGG
GTTCGAATCCCGTCGCCACCT
>TWTRNA04 tRNA-Thr
GCCCCGGTAGCTCAGTGGCAGAGCACTTCCATGGTAAGGAAGGGGTCGTC
AGTTCAATCCTGACCCGGGGCT
>TWTRNA54 tRNA-Gly
GCGAGTGTAGTTCAATGGCAGAACTTCAGCTTCCCAAGCTGACGGCGCGG
GTTCGATTCCCGTCACTCGCTCGA
>TWTRNA19 tRNA-Asn
TCCTCGATAGCTCAATTGGCAGAGCAGCCGGCTGTTAACCGGCAGGTTCT
TGGTTCGAGTCCAAGTCGGGGAG
>TWTRNA35 tRNA-Glu
GGCCCCATCGTCTAGAGGTCTAGGACGTCGCCCTCTCACGGCGGTAGCGC
GGGTTCGAATCCCGCTGGGGTCA
>TWTRNA46 tRNA-Pro
CGGGGTGTGGCGCAGCTTGGTAGCGCGCCTCGTTCGGGACGAGGAGGTCG
TGGGTTCAAATCCCGCCACCCCGA
>TWTRNA43 tRNA-Met
CGCGGGGTGGAGCAGTTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCG
CAGGTTCAAATCCTGCCCCCGCAA
>TWTRNA41 tRNA-Glu
GGCCATCGTCTAGAGGCCTAGGACCCCGCCCTTTCACGGCGGAGGTCGCG
GGTTCGAGTCCCGTCAGGGTCG
>TWTRNA38 tRNA-Phe
GGCTCTGTAGCTCAGTTGGTAGAGCGTTCGACTGAAAATCGAAAGGTCAC
CGGATCGATACCGGTCGGAGCCACAA
>TWTRNA31 tRNA-Arg
GCCCTCGTAGCTCAGCGGATAGAGCAGAAGACTTCTAATCTTTGTGTCGC
AGGTTCGATTCCTGTCGGGGGCG
>TWTRNA05 tRNA-Tyr
GGCGAGTTACCCAAGTGGCCAAAGGGATCTGACTGTAAATCAGCTGTCAT
TCGACTTCGGGGGTTCGAATCCCTCACTCGCCA
>TWTRNA25 tRNA-Arg
GCCCCCATAGCTCAGGGGATAGAGCGTCTGCCTCCGGAGCAGAAGGCCGT
GGGTTCAAATCCCGCTGGGGGCGCAA
>TWTRNA17 tRNA-Val
GGGCCTTTAGCTCAGCTGGCTAGAGCGCCACGTTTACACCGTGGAGGTCA
TCGGTTCGAGTCCGGTAGGGCCCA
>TWTRNA21 tRNA-Leu
GCCGGCGTGGCGGAACGGCAGACGCGGAGCACTCAAAATGCTTTGCCCTC
ATGGGCGTGTGGGTTCAAATCCCTCCGCCGGCACCG
>TWTRNA28 tRNA-Val
GGGCGATTGGCGCAGTGGTAGCGCGCTTCCTTGACACGGAAGAGGTCACT
GGTTCGAGTCCAGTATCGCCCA
>TWTRNA24 tRNA-Thr
GCCAGCTTGGCGCAATTGGTAGCGCACCCGACTTGTAATCGGGCGGTTAT
GGGTTCGAGTCCCATAGCTGGCT
>TWTRNA33 tRNA-Pro
CGGGGTGTAGCTCAGTTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCG
CAGGTTCAAATCCTGTCGCCCCGA
>TWTRNA49 tRNA-Ser
GGAGACGTCGCATAGCCAGGTCTAGTGCGCCACCCTGCTAAGGTGGAGTG
CCCGAAAGGGTACCGTGGGTTCAAATCCCACCGTCTCCG
>TWTRNA30 tRNA-His
GTGGATATAGCTCAGCTGGTAGAGCACCTGGTTGTGGTCCAGGATGTCGC
GGGTTCGAGTCCCGTTATCCACC
>TWTRNA34 tRNA-Ala
GGGGCTATGGCGCAGGCTGGTAGCGCGTCTCGTTCGCAATGAGAAGGTCA
GGGGTTCGAATCCCCTTAGCTCCA
>TWTRNA23 tRNA-Met
GGGGCGGTAGCTCAGCTGGTTAGAGCTGCGAACTCATAATTCGTCGGTCA
CGGGTTCGAGTCCCGTCCGCCCCA
>TWTRNA36 tRNA-Glu
GGCCCCATCGTCTAGAGGCCTAGGACCCCGCCCTTTCACGGCGGTAGCAC
GGGTTCAAATCCCGTTGGGGTCACCC
>TWTRNA44 tRNA-Lys
GGGCCTGTAGCTCAGCTGGAAGAGCATCGGACTTTTAATCCGCTGGTCGT
GGGTTCGAGCCCCACCGGGCCCA
>TWTRNA02 tRNA-Ala
GGGGATGTAGCTCAGTTAGGCAGAGCGCCTGCTTTGCAAGCAGGAGGTCG
GGGGTTCGATTCCCCTCATCTCCACCA
>TWTRNA22 tRNA-Leu
GCGCGGGTGGCGGAATCGGTAGACGCGCTAGCTTGAGGTGCTAGTGCCAA
TTTGAAAGGCGTAGGGGTTCAAGTCCCCTCTCGCGCA
>TWTRNA40 tRNA-Leu
GCGGGAGTGGTGAAATTGGCAGACACGCAGGATTTAGGTTCCTGTGCCTT
TGGCGTGGGGGTTCAAGTCCCCCCTTCCGCA
>TWTRNA06 tRNA-Pro
CGGGCTGTGGCGCAGCTTGGTAGCGCACTTGACTGGGGGTCAAGGGGTCG
TGGGTTCAAATCCCGCCAGCCCGACAA
>TWTRNA08 tRNA-Phe
GGCTCTGTAGCTCAGTTGGTAGAGCGTTCGACTGAAAATCGAAAGGTCAC
CGGATCGATACCGGTCGGAGCCACAA
>TWTRNA52 tRNA-Leu
GCGCGAGTGGCGGAATTGGTAGACGCGCACGGTTCAGGTCCGTGTGTCTG
CGAAGACATGGGGGTTCAAGTCCCCCCTCGCGCA
>TWTRNA15 tRNA-Lys
GCGCCTCTAGCTCAATCGGCAGAGCAACTGACTCTTAATCAGCAGGTTCT
GGGTTCGAGTCCCAGGGGGCGCACGA
>TWTRNA03 tRNA-Met
GGCGGGATAGCTCAGTTGGTTAGAGCACACGGCTCATAATCGTGGGGTCA
CGGGTTCGAATCCCGTTCCCGCTACCA
>TWTRNA20 tRNA-Arg
GCCTCTGTAGCTCAATGGAAGAGCGGTTCCGTCCTAAGGAAATGGTTGGG
GGTTCGAGTCCCTCCAGGGGCG
>TWTRNA50 tRNA-Arg
GCGCCCGTAGCTCAACGGATAGAGCATCTGACTACGGATCAGAAGGTTGG
GGGTTCGAATCCCTTCGGGCGCG
>TWTRNA53 tRNA-Leu
GCCCTCGTAGCCCAATCGGCAGAGGCAGACGACTTAAAATCGTCCCAGTG
TGGGTTCGAGTCCCACCGAGGGCA
>TWTRNA16 tRNA-Gln
TGGGGTATGGTGTAATTGGCAACACGGCTGATTCTGGTTCAGTTGTTCTT
GGTTCGAGTCCAGGTACCCCAG
>TWTRNA45 tRNA-Thr
GCCGCCCTAGCTCAGTTAGGCAGAGCGATTCACTCGTAATGAATAGGTCA
GGGGTTCGACTCCCCTGGGCGGCT
>TWTRNA18 rnpB, RNA subunit (M1 RNA) of ribonuclease P
AGGGCTTGCGGGCGGTCGCGGTGTCTATTGGTACCGAGGAACGTCCGGGC
TCCGTAGAGCAAGGCGGTGGGTAACGCCCACCCGGGGTGACCCGAGAGCT
GAGTGCCACAGAAAATAACCGCCGTTACGGTAAGGGTGAAAAGGTGGTGT
AAGAGACCACCAGGGATTGGGGTGACCCAATCTGCTGGGTAAACCTCGCC
TGGAGCAAGATCAAGCAGGGAACTTAGGCTGCTCGTTTAGTTCCCGGGTA
GATCGCTAGAGCCTGTTGGCAACAACAGGTCAAGATGGATGGCCGCCTCG
TTGGTTTTTAATCCAACGAACAGAACCCGGCGTATAGCAAGCCCTCGTTC
A
>TWTRNA13 rrf, 5S ribosomal RNA
GTCTCGGGGGCAATGGCAAGAGGGAAACGCCTGGTTACATTCCGAACCCA
GAAGCTAAGCCTCTTAGCGCTGATGGTACTGCAGGGGGGACCCTGTGGGA
GAGTAAGACGCCCCCGGGCT
>TWTRNA12 rrl, 23S ribosomal RNA
GATTCAAGCTACTTTAAGAGCAAATGGTGGATGCCTTGGTATCTGGAGCC
GAAGAAGGACGTAGCAATCTGCGATAAGCCTCGGGAAGCTGATAAGCGAG
CTTTGATCCGAGGATTTCCGAATGGGGAAACCTGGTGGGGCGCAGCAATG
CGACCCTGTCACTCCCGCCTGAATATATAGGGCGGGCAGAGGGAACGTGG
GGAAGTGAAACATCTCAGTACCCACAGGAAGAGAAAGCAATAGCGATTCC
GTTAGTAGTGGCGAGCGAAACCGGAACAGGCCAAACCGATTGAGTGTTAT
AGCCGGCAGGCGTTTCTTGATCGGGGTAGTGGGATCCTCTATGTGGTTCT
GCCGAACCACACGCGTAGTGCAGGGGTATAGGTGAATGATTTTGAACAGT
CAACCGAAGAGGGTGATAGTCCCGTAATCGAAATGCCCCGGTGCCGCGAG
AGGATATCCCAAGTAGCACGGGCCCCGTGAAATCCCGTGTGAATCTGTCA
AGACCACTTGATAAGCCTAAATACTACCAGATAACCGATAGTGGACGAGT
ACCGTGAGGGAAAGGTGAAAAGTACCCCGAGAGGGGAGTGAAATAGTACC
TGAATCCATTTGCTTACAAACCGTCGGAGCAGTGTGCGACTTTTGTCGCT
TGTGACGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGCGATGTGTGG
CGAGATTAACCCGTTGGGGGTAGTCGTAGCGAAAGCGAGTCTGAATAGGG
CGAATTAGTCGCATGTCCTAGACCCGAAGCGAAGTGATCTATCCATGGCC
AGGCTGAAGCGAGGGTAAGACCTCGTGGAGGGCCGAACCCACTTAGGTTG
AAAACTGAGGGGATGAGCTGTGGATCGGGGTGAAAGGCCAATCAAACTTC
GTTATAGCTGGTTCTCTCCGAAATGCATTTAGGTGCAGCGTTGCGTGTTT
CTTGCCGGAGGTAGAGCTACTGGATGGCCAATGGGCCCTACAAGGTTACT
GACGTCAGCCAAACTCCGAATGCCGGTAAGTTAGAGCGCAGCAGTGAGGC
TGCGGGGGATAAGCTTCGTAGCCGAGAGGGAAACAACCCAGACCACCGAT
TAAGGTCCCTAAGTGTGTGCTAAGTGGTAAAGGATGTGGAGTTGCACAGA
CAGCCAGGAGGTTGGCTTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATA
GCTCACTGGTCAAGTGATTCTGCGCCGACAATGTAACGGGGCTAAAGCAC
ATCACCGAAATTGTGGCATCGATACACATAGGTAGGCTTTCGTAGTCCAG
CCGTATCGATGGGTAGGAGAGCGTCGTGTGGCGAAAGAAGCGGCGATGTA
AATCAGCCGTGGACGCTACACGAGTGAGAATGCAGGCATGAGTAGCGAAA
GGCGGGTGAAAAACCCGCCCCCCCGAATAACTAAGGGTTCCAGGGCCAGG
CTAATCCGCCCTGGGTAAGTCGGGACCTAAGGCGAGGCCGAGAGGCGTAG
TCGATGGACAACGGGTTGATATTCCCGTACCGGCAAAGAACCGCCCATAT
TCCGCGTAGTTTCGTTCAGCATTTTGCTGTGCTTACGGTACCCCTTTTAC
GGTGTGCGGGATAAGTGTTCAGGTGTGACGCAGGAAGGTAGCCAAGCCGG
GCGATGGTTGACCCGGTGTAAGTGTGTAACCCGGAGGGTAGGCAAATCCG
CCCTCCATCTAAAGGGCCAGGCACGACGCGTAGCGCTTCGGCGCGAAATT
GGTGATCCTATGCTGACTAGAAAAGCATCGACACAAGGTTCTAGCTGCCC
GTACCCCAAACCGACTCAGGTGGTTAGGTAGAGAATACCAAGGGGATCGA
GAGAATCGTGGTTAAGGAACTCGGCAAAATGCCTCCGTAACTTCGGGAGA
AGGAGGGCCTGAGGCGTGACGAGACTAGCTCTCCTAGCGCTGCAGGGTCA
CAGAAACCAGTGGGGAGCGACTGTTTATTAAAAACATAGGTCTGTGCCAA
GTCGTAAGACGACGTATACAGACTGACGCCTGCCCGGTGCCGGAAGGTTA
AGAGGACGGGTCAGCTTTGGCGACGCTCGGAATTTAAGCCCCGGTAAACG
GCGGTGGTAACTATAACCATCCTAAGGTAGCGAAATTCCTTGTCGGGTAA
GTTCCGACCTGCACGAATGGCGTAACGACTTCCCAACTGTCTCAACCGCG
AACTCGGCGAAATTGCACTACGAGTGAAGATGCTCGTTACGCGTAGCAGG
ACGGAAAGACCCCGAGACCTTTACTATAGCTTGGTACTGGTACTTGGTGC
GGTTTGTGTAGGATAGGTGGGAGACTGTGAAGCGGGTGCGCCAGCACTCG
TGGAGTCGTTGTTGAAATACCACTCTGATCGCCCCGGGTGTCTAACTTAG
AACCGTAATCCGGTTCGAGGACAATGCCTGGTGGGTAGTTTAACTGGGGC
GGTTGCCTCCCAAAAGGTAACGGAGGCGCCCAAAGGTTCCCTCAGCCTGG
TCGGTAATCAGGTGGCGAGTGTAAGTGCACAAGGGAGCTTGACTGCGAGA
CTGACGGGTCGAGCAGGGACGAAAGTCGGGACTAGTGATCCGGCAGTGGC
TTGTGGAAGCGCTGTCGCTCAACGGATAAAAGGTACCTCGGGGATAACAG
GTTGGTCCCTCCCAAGAGTCCATATCGACGGAGGGGTTCGACACCTCGAT
GTCGGCTCGTCGCATCCTGGGGCTGTAGCAGGTCCCAAGGGTTGGGCTGT
TCGCCCATTAAAGCGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGT
TCGGTCCCTATCCGCTACGCGCGTCGGAAATTTGAGAGGAGCTGACCCTA
GTACGAGAGGACCGGGTTGGACGAACCTCTGGTGTACCAGTTGTCCTGCC
AAGGGCACGGCTGGTTTGCTACGTTCGGAACGGATAACCGCTGAAAGCAT
CTAAGCGGGAAACCGGCCTCAAGATGAGATTTCCATGCCCTTTTGGGCGA
GAGGCTCCCAGTAGAACACTGGGTTGATAGGCTCGATGTGTACGCAGGGA
CTAAAGACCTGTTTAGCTTACGAGTACTAATAGGCCGATTGCTTGAAACA
CA
>TWTRNA11 rrs, 16S ribosomal RNA
TTATTATGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCT
TAACACATGCAAGTCGAACGGAAATCAGGGAGCTTGCTCCCTGTGATTAG
TGGCGAACGGGTGAGTAACACGTGAGCAACCTGCCCCTAACTTTGGGATA
ACTTCGGGAAACCGGGGCTAATACCAAATACGACCCATGAGGGCATCCTC
TGTGGGTGGAAAGAATTTCGGTTGGGGATGGGCTCGCGGCCTATCAGCTT
GTTGGTGGGGTAACGGCCTACCAAGGCATCGACGGGTAGCCGGCCTGAGA
GGGTGATCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAG
GCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCAACGC
CGCGTGGGGGAAGAAGGCCTTCGGGTTGTAAACCTCTTTTGGCAGGGAAG
AAGCGAAAGTGACGGTACCTGCAGAAAAAGCGCCGGCTAACTACGTGCCA
GCAGCCGCGGTAATACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCG
TAAAGAGCTCGTAGGCGGTTTGTCACGTCTGCCGTGAAAATCCGAGGCTC
AACCTCGGACCTGCGGTGGGTACGGGCAGGCTAGAGTGCGATAGGGGAGA
GCGGAATTCCTGGTGTAGCGGTGAAATGCGCAGATATCAGGAGGAACACC
GATGGCGAAGGCAGCTCTCTGGGTCGCTACTGACGCTGAGGAGCGAAAGC
GTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGTT
GGGCGCTAGACGTGGGGGTGGTTCCACCGCTTCCGTGTCGCAGCTAACGC
ATTAAGCGCCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGA
ATTGACGGGGGCCCGCACAAGCGGCGGAGCATGCGGATTAATTCAATGCA
ACGCGAAGAACCTTACCAAGGCTTGATATATACCGGAAAGGCGTAGAGAT
ACGCCCCCCGCAAGGTCGGTATACAGGTGGTGCACGGTTGTCGTCAGCTC
GTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTCCT
GTGTTGCCAGCGCGTAATGGCGGGGACTCACAGGAGACTGCCGGGGTCAA
CTCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCTTCGGTCTTGG
GCTTCACGCGTGCTACAATGGCTGGTACAGAGGGTTGCAATATCGCAAGG
TGGAGCGAATCTCAAAAAGCCAGTCTCAGTTCGGATTGGGGTCTGCAACT
CGACCCCATGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCAATGCTGCG
GTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGTCATGAAAGC
TGGTAACACCCGAAGCCGGTGACTTAACCTTTTTGGAGAGAGCCGTCGAA
GGTGGGATTGGTGATTGGGACTAAGTCGTAACAAGGTAGCCGTACCGGAA
GGTGCGGCTGGATCACCTCCTTTCT
>TWTRNA14 ssrA, tmRNA
GGGGATGACTGGTTTCGACGCTGTTTGTGTACTCGTGGGAAGCGGGTCGA
GGATGCGAGGTTGTCTCGTTAACGATCCTCGCAAAATATAAGTGCCAACT
TAAAGCGCACTGATCTAAGTCTTGCTGCTTAAGCGCTTAGATCTGTCGGT
ATAGGGCTTGTCTTCGGCCCTGTATCCGGCATGGTTTTAGAGGACTTGCC
GCGTGTTTGCCGCTTGCGTGAACACCGGGACTTTATTGCAAGCTGGGCCT
GTTGATTTAGATTCCGCTGCAAAGAATCAGGGCTGAGTATAACGGTTTTA
GCGGATACACCCGTAGAAGTCACGGGCTCCATGCCGCGGACGGGGGTTCG
ATTCCCCCCATCTCCACTG