Gene list
Applied filters:
COG category: NOT ANALYZED
Genomic element: chromosome
Number of genes found: 91
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Silicibacter pomeroyi DSS-3, DSS-3 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SPO_tRNA-Ile-2 | tRNA-Ile | chromosome | tRNA | 3465886 | 77 | - | 0.61039 | |
NA | SPO_tRNA-Pro-5 | tRNA-Pro | chromosome | tRNA | 2645397 | 77 | + | 0.688312 | |
NA | SPO_tRNA-Leu-3 | tRNA-Leu | chromosome | tRNA | 2251642 | 86 | - | 0.604651 | |
NA | SPO_tRNA-Gly-5 | tRNA-Gly | chromosome | tRNA | 2173838 | 74 | + | 0.648649 | |
NA | SPO2558 | chromosome | pseudo | 2708816 | 1961 | + | 0.581846 | ||
NA | SPO2478 | chromosome | pseudo | 2628409 | 1381 | + | 0.682114 | ||
NA | SPO_tRNA-Val-3 | tRNA-Val | chromosome | tRNA | 2766850 | 75 | - | 0.48 | |
NA | SPO_tRNA-Gln-2 | tRNA-Gln | chromosome | tRNA | 636094 | 75 | + | 0.56 | |
NA | SPO_tRNA-Pro-4 | tRNA-Pro | chromosome | tRNA | 2274996 | 77 | - | 0.662338 | |
NA | SPO_tRNA-Gly-6 | tRNA-Gly | chromosome | tRNA | 3206889 | 75 | - | 0.613333 | |
NA | SPO2375 | chromosome | pseudo | 2520025 | 400 | - | 0.5975 | ||
NA | SPO_tRNA-Met-5 | tRNA-Met | chromosome | tRNA | 4010290 | 77 | - | 0.597403 | |
NA | SPO1297 | chromosome | pseudo | 1360686 | 1342 | + | 0.623696 | ||
NA | SPO_tRNA-Met-4 | tRNA-Met | chromosome | tRNA | 3701370 | 77 | + | 0.571429 | |
NA | SPO2379 | chromosome | pseudo | 2522754 | 808 | - | 0.555693 | ||
NA | SPO1296 | chromosome | pseudo | 1359755 | 1013 | + | 0.627838 | ||
NA | SPO3061 | chromosome | pseudo | 3271806 | 1284 | + | 0.675234 | ||
NA | SPO_tRNA-Gly-2 | tRNA-Gly | chromosome | tRNA | 1217181 | 75 | - | 0.586667 | |
NA | SPO_tRNA-Ala-2 | tRNA-Ala | chromosome | tRNA | 3465737 | 76 | - | 0.592105 | |
NA | SPO_tRNA-Arg-4 | tRNA-Arg | chromosome | tRNA | 2140752 | 77 | - | 0.636364 | |
NA | SPO_tRNA-Leu-5 | tRNA-Leu | chromosome | tRNA | 3207063 | 87 | - | 0.609195 | |
NA | SPO1248 | chromosome | pseudo | 1316312 | 1268 | + | 0.659306 | ||
NA | SPO_tRNA-Val-4 | tRNA-Val | chromosome | tRNA | 3481060 | 75 | + | 0.56 | |
NA | SPO_tRNA-Ala-3 | tRNA-Ala | chromosome | tRNA | 3827177 | 76 | + | 0.618421 | |
NA | SPO_tRNA-Cys-2 | tRNA-Cys | chromosome | tRNA | 1307509 | 74 | - | 0.608108 | |
NA | SPO_tRNA-Pro-2 | tRNA-Pro | chromosome | tRNA | 176312 | 78 | + | 0.615385 | |
NA | SPO2732 | chromosome | pseudo | 2919428 | 621 | + | 0.663446 | ||
NA | SPO_SptmRNA1 | sRNA | chromosome | misc_RNA | 2032300 | 312 | - | 0.583333 | |
NA | SPO_tRNA-Ser-2 | tRNA-Ser | chromosome | tRNA | 2046619 | 90 | + | 0.633333 | |
NA | SPO1706 | chromosome | pseudo | 1822082 | 903 | - | 0.624585 | ||
NA | SPO_tRNA-Met-2 | tRNA-Met | chromosome | tRNA | 2308217 | 76 | + | 0.578947 | |
NA | SPO_tRNA-Leu-6 | tRNA-Leu | chromosome | tRNA | 3985347 | 87 | + | 0.643678 | |
NA | SPO3904 | chromosome | pseudo | 3188456 | 535 | - | 0.628037 | ||
NA | SPO_tRNA-Ser-5 | tRNA-Ser | chromosome | tRNA | 3871397 | 90 | + | 0.666667 | |
NA | SPO_tRNA-Pseudo-2 | chromosome | tRNA | 1205683 | 84 | - | 0.678571 | ||
NA | SPO_tRNA-Arg-3 | tRNA-Arg | chromosome | tRNA | 537350 | 77 | + | 0.558442 | |
NA | SPO_tRNA-Arg-5 | tRNA-Arg | chromosome | tRNA | 3892522 | 77 | - | 0.636364 | |
NA | SPO2391 | chromosome | pseudo | 2538104 | 638 | - | 0.575235 | ||
NA | SPO0626 | chromosome | pseudo | 645850 | 1013 | - | 0.627838 | ||
NA | SPO2728 | chromosome | pseudo | 2913938 | 3965 | - | 0.685246 | ||
NA | SPO2024 | chromosome | pseudo | 2151176 | 1042 | - | 0.648752 | ||
NA | SPO_tRNA-Gly-3 | tRNA-Gly | chromosome | tRNA | 1217973 | 75 | - | 0.586667 | |
NA | SPO_tRNA-Leu-2 | tRNA-Leu | chromosome | tRNA | 1458077 | 87 | + | 0.62069 | |
NA | SPO_tRNA-Pro-3 | tRNA-Pro | chromosome | tRNA | 228692 | 77 | - | 0.623377 | |
NA | SPO_tRNA-Ala-4 | tRNA-Ala | chromosome | tRNA | 4014074 | 76 | - | 0.592105 | |
NA | SPO_tRNA-Ala-1 | tRNA-Ala | chromosome | tRNA | 263730 | 76 | + | 0.592105 | |
NA | SPO_tRNA-Asp-1 | tRNA-Asp | chromosome | tRNA | 2755575 | 77 | - | 0.675325 | |
NA | SPO_tRNA-Asn-2 | tRNA-Asn | chromosome | tRNA | 2310677 | 75 | + | 0.56 | |
NA | SPO_tRNA-Ser-4 | tRNA-Ser | chromosome | tRNA | 2929931 | 90 | - | 0.611111 | |
NA | SPO_tRNA-Trp-2 | tRNA-Trp | chromosome | tRNA | 758890 | 76 | + | 0.605263 | |
NA | SPO0117 | chromosome | pseudo | 124395 | 1563 | + | 0.62508 | ||
NA | SPO_tRNA-Met-3 | tRNA-Met | chromosome | tRNA | 3461953 | 77 | - | 0.597403 | |
NA | SPO_tRNA-Ile-1 | tRNA-Ile | chromosome | tRNA | 263580 | 77 | + | 0.61039 | |
NA | SPO2254 | chromosome | pseudo | 2399395 | 663 | - | 0.68175 | ||
NA | SPO_tRNA-Leu-4 | tRNA-Leu | chromosome | tRNA | 2429430 | 84 | - | 0.619048 | |
NA | SPO_tRNA-Glu-3 | tRNA-Glu | chromosome | tRNA | 1849667 | 75 | - | 0.586667 | |
NA | SPO2404 | chromosome | pseudo | 2554817 | 638 | + | 0.575235 | ||
NA | SPO0630 | chromosome | pseudo | 651392 | 362 | - | 0.60221 | ||
NA | SPO0627 | chromosome | pseudo | 647663 | 731 | - | 0.543092 | ||
NA | SPO2360 | chromosome | pseudo | 2501991 | 1228 | + | 0.638436 | ||
NA | SPO_tRNA-Thr-2 | tRNA-Thr | chromosome | tRNA | 1082915 | 76 | + | 0.565789 | |
NA | SPO_tRNA-Glu-2 | tRNA-Glu | chromosome | tRNA | 1849403 | 75 | - | 0.586667 | |
NA | SPO_tRNA-Ile-3 | tRNA-Ile | chromosome | tRNA | 4014223 | 77 | - | 0.61039 | |
NA | SPO2973 | chromosome | pseudo | 3170068 | 453 | - | 0.576159 | ||
NA | SPO_SprnpB1 | sRNA | chromosome | misc_RNA | 3163914 | 341 | - | 0.668622 | |
NA | SPO_tRNA-Asp-2 | tRNA-Asp | chromosome | tRNA | 2755704 | 77 | - | 0.675325 | |
NA | SPO_tRNA-Thr-3 | tRNA-Thr | chromosome | tRNA | 2140232 | 76 | - | 0.605263 | |
NA | SPO_tRNA-Asn-1 | tRNA-Asn | chromosome | tRNA | 2251315 | 75 | + | 0.56 | |
NA | SPO0561 | chromosome | pseudo | 560279 | 1853 | - | 0.648138 | ||
NA | SPO_tRNA-Val-2 | tRNA-Val | chromosome | tRNA | 726006 | 76 | - | 0.526316 | |
NA | SPO_tRNA-Gln-1 | tRNA-Gln | chromosome | tRNA | 176231 | 76 | + | 0.592105 | |
NA | SPO1654 | chromosome | pseudo | 1760043 | 981 | - | 0.624873 | ||
NA | SPO2402 | chromosome | pseudo | 2552507 | 788 | - | 0.56599 | ||
NA | SPO0969 | chromosome | pseudo | 1020727 | 613 | - | 0.659054 | ||
NA | SPO_tRNA-His-1 | tRNA-His | chromosome | tRNA | 1886364 | 77 | + | 0.597403 | |
NA | SPO0625 | chromosome | pseudo | 644590 | 1342 | - | 0.623696 | ||
NA | SPO_tRNA-Ser-3 | tRNA-Ser | chromosome | tRNA | 2119397 | 90 | + | 0.644444 | |
NA | SPO_tRNA-Lys-2 | tRNA-Lys | chromosome | tRNA | 294934 | 76 | + | 0.539474 | |
NA | SPO0121 | chromosome | pseudo | 129255 | 764 | - | 0.633508 | ||
NA | SPO_tRNA-Gly-4 | tRNA-Gly | chromosome | tRNA | 1218081 | 75 | - | 0.586667 | |
NA | SPO_tRNA-Arg-2 | tRNA-Arg | chromosome | tRNA | 485387 | 77 | - | 0.558442 | |
NA | SPO1653 | chromosome | pseudo | 1758541 | 788 | - | 0.56599 | ||
rrfD | SPO_Sp5SD | 5S ribosomal RNA | chromosome | rRNA | 267353 | 118 | + | 0.618644 | |
rrfE | SPO_Sp5SE | 5S ribosomal RNA | chromosome | rRNA | 3462072 | 118 | - | 0.618644 | |
rrfF | SPO_Sp5SF | 5S ribosomal RNA | chromosome | rRNA | 4010409 | 118 | - | 0.618644 | |
rrlA | SPO_Sp23SA | 23S ribosomal RNA | chromosome | rRNA | 264255 | 2895 | + | 0.545078 | |
rrlB | SPO_Sp23SB | 23S ribosomal RNA | chromosome | rRNA | 3462393 | 2895 | - | 0.545078 | |
rrlC | SPO_Sp23SC | 23S ribosomal RNA | chromosome | rRNA | 4010730 | 2895 | - | 0.545078 | |
rrsA | SPO_Sp16SA | 16S ribosomal RNA | chromosome | rRNA | 261910 | 1455 | + | 0.560137 | |
rrsB | SPO_Sp16SB | 16S ribosomal RNA | chromosome | rRNA | 3466178 | 1455 | - | 0.560137 | |
rrsC | SPO_Sp16SC | 16S ribosomal RNA | chromosome | rRNA | 4014515 | 1455 | - | 0.560137 |