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2024-06-02 10:31:55

Gene list

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COG category: Cell motility
Genomic element: chromosome

Number of genes found: 128

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Shewanella oneidensis MR-1, MR-1
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
SO0111 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS121746 615 - 0.458537
SO0132 flagellar protein FliL, putativeSubName: Full=Periplasmic FliL-like protein; chromosome CDS140742 411 + 0.46472
SO0189 fibronectin type III domain proteinSubName: Full=Bifunctional autotransporter / adhesin cadherin family; chromosome CDS192488 7569 + 0.512221
SO0281 type IV pilus biogenesis protein PilMSubName: Full=Type IV pilus biogenesis protein PilM; chromosome CDS288762 1080 + 0.448148
SO0282 type IV pilus biogenesis protein PilNSubName: Full=Type IV pilus biogenesis protein PilN; chromosome CDS289829 585 + 0.42906
SO0283 type IV pilus biogenesis protein PilOSubName: Full=Type IV pilus biogenesis protein PilO; chromosome CDS290410 621 + 0.399356
SO0284 type IV pilus biogenesis protein PilPSubName: Full=PilQ chaperone PilP; chromosome CDS291030 516 + 0.422481
SO0415 type IV pilus biogenesis protein PilCSubName: Full=Type IV pilus inner membrane protein PilC; chromosome CDS430085 1272 - 0.477201
SO0416 type IV pilus biogenesis protein PilBSubName: Full=Type IV pilus assembly ATPase PilB; chromosome CDS431608 1710 - 0.489474
SO0417 pilin, putativeSubName: Full=Type IV pilin protein PilA; chromosome CDS433391 417 - 0.446043
SO0500 methyl-accepting chemotaxis proteinSubName: Full=Chemotaxis signal transduction system methyl accepting sensory transducer with 4HB_MCP sensory domain; chromosome CDS525133 1632 - 0.49326
SO0670 hypothetical proteinSubName: Full=Mu phage uncharacterized protein; chromosome CDS688755 894 - 0.410515
SO0851 hypothetical protein chromosome CDS873944 558 - 0.476703
SO0853 pilin, putativeSubName: Full=PilD processed protein; chromosome CDS874887 435 - 0.466667
SO0854 type IV pilin, putativeSubName: Full=PilD processed protein; chromosome CDS875323 372 - 0.489247
SO0987 methyl-accepting chemotaxis proteinSubName: Full=Methyl accepting sensory transducer with Cache_2 small molecule binding domain; chromosome CDS1015101 1665 + 0.449249
SO1028 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1065663 213 + 0.347418
SO1056 methyl-accepting chemotaxis proteinSubName: Full=Methyl accepting sensory transducer with Cache_1 small molecule binding domain; chromosome CDS1094947 1893 - 0.471738
SO1144 methyl-accepting chemotaxis proteinSubName: Full=Chemotaxis signal transduction system methyl accepting sensory transducer; chromosome CDS1187307 1089 - 0.431589
SO1278 methyl-accepting chemotaxis proteinSubName: Full=Chemotaxis signal transduction system methyl accepting sensory transducer; chromosome CDS1328993 2121 + 0.455446
SO1434 methyl-accepting chemotaxis proteinSubName: Full=Chemotaxis signal transduction system methyl accepting sensory transducer with 4HB_MCP sensory domain; chromosome CDS1495729 1632 - 0.405024
SO2083 methyl-accepting chemotaxis proteinSubName: Full=Chemotaxis signal transduction system methyl accepting sensory transducer; chromosome CDS2178871 1518 - 0.461133
SO2117 methyl-accepting chemotaxis protein chromosome CDS2221890 1134 + 0.415344
SO2123 methyl-accepting chemotaxis proteinSubName: Full=Chemotaxis signal transduction system methyl accepting sensory transducer; chromosome CDS2228055 1965 + 0.450891
SO2240 methyl-accepting chemotaxis proteinSubName: Full=Energy taxis modulating methyl accepting sensory transducer with Cache_2 sensory domain; chromosome CDS2355819 1638 - 0.454212
SO2323 methyl-accepting chemotaxis proteinSubName: Full=Chemotaxis signal transduction system methyl accepting sensory transducer; chromosome CDS2432836 1941 + 0.415765
SO2546 conserved hypothetical proteinSubName: Full=Chemotaxis signal transduction system inhibitor of MCP methylation CheC; chromosome CDS2680365 573 - 0.396161
SO2677 conserved hypothetical proteinSubName: Full=Mu phage small terminase subunit GpD; chromosome CDS2801187 582 + 0.512028
SO2807 hypothetical proteinSubName: Full=C-di-GMP-binding protein; chromosome CDS2930446 303 + 0.432343
SO3052 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome CDS3164464 1740 - 0.458046
SO3203 CheW domain proteinSubName: Full=Chemotaxis signal transduction system adaptor protein CheW; chromosome CDS3343186 981 - 0.439348
SO3207 chemotaxis proteinSubName: Full=Chemotaxis signal transduction system histidine kinase CheA; EC=2.7.13.3; chromosome CDS3346681 2277 - 0.471673
SO3237 flagellinSubName: Full=Flagellin FliC; chromosome CDS3375781 819 - 0.440781
SO3238 flagellinSubName: Full=Flagellin FliC; chromosome CDS3376855 822 - 0.420925
SO3253 flagellar basal-body P-ring formation protein FlgA, putativeSubName: Full=Assembly protein for flagellar basal-body P ring FlgA; chromosome CDS3390904 708 + 0.408192
SO3282 methyl-accepting chemotaxis proteinSubName: Full=Energy taxis modulating methyl accepting sensory transducer; chromosome CDS3422537 2004 + 0.458583
SO3314 fimbrial biogenesis and twitching motility protein, putativeSubName: Full=Outer membrane PilQ pilotin PilF; chromosome CDS3466069 789 - 0.463878
SO3477 pilin biogenesis protein-related protein chromosome CDS3622553 1791 - 0.481854
SO3510 methyl-accepting chemotaxis protein, putative chromosome CDS3662623 975 - 0.459487
SO3520 type IV pilus biogenesis protein, putativeSubName: Full=Type IV minor pilin protein FimT; chromosome CDS3674719 513 + 0.405458
SO3521 type IV pilus biogenesis protein, putativeSubName: Full=Type IV pilus biogenesis protein FimU; chromosome CDS3675517 495 + 0.40202
SO3525 type IV pilin biogenesis protein, putativeSubName: Full=Type IV pili system adhesin PilY; chromosome CDS3678173 3507 - 0.406045
SO3526 hypothetical proteinSubName: Full=Type IV minor pilin protein PilX; chromosome CDS3681683 462 - 0.458874
SO3527 hypothetical protein chromosome CDS3682156 939 - 0.404686
SO3582 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis sensory transducer with 4HB sensory domain; chromosome CDS3748521 1626 + 0.434809
SO3642 methyl-accepting chemotaxis proteinSubName: Full=Energy taxis modulating methyl accepting sensory transducer; chromosome CDS3800833 2022 + 0.457468
SO3838 methyl-accepting chemotaxis proteinSubName: Full=Chemotaxis signal transduction system methyl accepting sensory transducer; chromosome CDS3987645 1863 - 0.428878
SO3890 methyl-accepting chemotaxis proteinSubName: Full=Energy taxis-modulating methyl accepting sensory transducer with hemerythrin sensory domain; chromosome CDS4035586 1590 - 0.446541
SO3905 conserved hypothetical protein chromosome CDS4052946 696 - 0.449713
SO3915 conserved hypothetical proteinSubName: Full=Chemotaxis signal transduction system CheY dephosphorylase CheX; chromosome CDS4061643 465 + 0.425806
SO4010 hypothetical protein chromosome CDS4153665 144 + 0.423611
SO4053 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome CDS4205753 1905 + 0.499213
SO4121 hypothetical proteinSubName: Full=Protein with C-terminal FimV core domain; chromosome CDS4279454 1038 - 0.467245
SO4454 methyl-accepting chemotaxis protein chromosome CDS4643423 1929 + 0.485744
SO4466 methyl-accepting chemotaxis proteinSubName: Full=Chemotaxis signal transduction system methyl accepting sensory transducer; chromosome CDS4654062 1956 - 0.473415
SO4476 spheroplast protein y precursor, putativeSubName: Full=Periplasmic stress adaptor protein CpxP; chromosome CDS4664291 492 - 0.473577
SO4557 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein with Cache sensory domain; chromosome CDS4753426 1872 - 0.501603
SO4579 fimbrial protein, putativeSubName: Full=P pilus subunit FimA; chromosome CDS4773582 561 - 0.449198
SO4635 methyl-accepting chemotaxis proteinSubName: Full=Chemotaxis signal transduction system methyl accepting sensory transducer; chromosome CDS4830958 1977 + 0.498735
cheA chemotaxis protein CheASubName: Full=Chemotaxis signal transduction system histidine kinase CheA; EC=2.7.13.3; chromosome CDS2225414 2109 + 0.432907
cheB-1 protein-glutamate methylesterase CheBRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase of group 2 operon; EC=3.1.1.61; chromosome CDS2231476 1056 + 0.467803
cheB-2 protein-glutamate methylesterase CheBRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon; EC=3.1.1.61; chromosome CDS2436780 1071 + 0.482726
cheB-3 protein-glutamate methylesterase CheBRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon; EC=3.1.1.61; chromosome CDS3345536 1125 - 0.468444
cheD-1 chemotaxis protein CheD chromosome CDS2230846 627 + 0.408293
cheD-2 chemotaxis protein CheD, putative chromosome CDS2436161 600 + 0.403333
cheR-1 chemotaxis protein methyltransferase CheRRecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; chromosome CDS2230038 834 + 0.42446
cheR-2 chemotaxis protein methyltransferase CheR chromosome CDS3388836 840 - 0.430952
cheR-3 chemotaxis protein methyltransferase CheRRecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; chromosome CDS2435323 828 + 0.385266
cheV-1 chemotaxis protein CheVSubName: Full=Chemotaxis signal transduction system response regulator CheV; EC=2.7.3.-; chromosome CDS2091375 945 + 0.446561
cheV-2 chemotaxis protein CheVSubName: Full=Chemotaxis signal transduction system response regulator CheV; EC=2.7.3.-; chromosome CDS3250827 900 - 0.48
cheV-3 chemotaxis protein CheVSubName: Full=Chemotaxis signal transduction system response regulator CheV; EC=2.7.3.-; chromosome CDS3389778 921 - 0.422367
cheW-1 purine-binding chemotaxis protein CheWSubName: Full=Chemotaxis signal transduction system adaptor protein CheW; chromosome CDS2227537 513 + 0.442495
cheW-2 purine-binding chemotaxis protein CheWSubName: Full=Chemotaxis signal transduction system adaptor protein CheW; chromosome CDS2434790 537 + 0.417132
cheW-3 purine-binding chemotaxis protein CheWSubName: Full=Chemotaxis signal transduction system adaptor protein CheW; chromosome CDS3342684 495 - 0.428283
cheZ chemotaxis protein CheZRecName: Full=Protein phosphatase CheZ; EC=3.1.3.-; AltName: Full=Chemotaxis protein CheZ; chromosome CDS3348973 738 - 0.429539
flaG flagellin FlaG chromosome CDS3375265 360 - 0.430556
flgB flagellar basal-body rod protein FlgBRecName: Full=Flagellar basal body rod protein FlgB; chromosome CDS3388288 405 - 0.434568
flgC flagellar basal-body rod protein FlgCSubName: Full=Flagellar basal-body rod protein FlgC; chromosome CDS3387869 417 - 0.441247
flgD basal-body rod modification protein FlgD chromosome CDS3387065 762 - 0.437008
flgE flagellar hook protein FlgESubName: Full=Flagellar hook protein FlgE; chromosome CDS3385636 1362 - 0.465492
flgF flagellar basal-body rod protein FlgFSubName: Full=Flagellar component of cell-proximal portion of basal-body rod FlgF; chromosome CDS3384720 744 - 0.491935
flgG flagellar basal-body rod protein FlgGSubName: Full=Flagellar component of cell-distal portion of basal-body rod FlgG; chromosome CDS3383921 789 - 0.470215
flgH flagellar L-ring protein FlgHRecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor; chromosome CDS3383234 675 - 0.475556
flgI flagellar P-ring protein FlgIRecName: Full=Flagellar P-ring protein; AltName: Full=Basal body P-ring protein; Flags: Precursor; chromosome CDS3382131 1092 - 0.477106
flgJ flagellar protein FlgJSubName: Full=Flagellar rod cap protein and peptidoglycan hydrolase FlgJ; EC=3.2.1.-; chromosome CDS3380959 1155 - 0.471861
flgL flagellar hook-associated protein FlgLSubName: Full=Flagellar hook-associated protein FlgL; chromosome CDS3377772 1212 - 0.445545
flgM negative regulator of flagellin synthesis FlgMSubName: Full=Flagellar biosynthesis anti-sigma factor FlgM; chromosome CDS3391687 321 + 0.429907
flgN flagellar biosynthetic protein FlgNSubName: Full=Secretion chaperone for FlgK and FlgL FlgN; chromosome CDS3392017 426 + 0.415493
flhA flagellar biosynthesis protein FlhASubName: Full=Flagellar export protein FlhA; chromosome CDS3353135 2100 - 0.463333
flhB flagellar biosynthetic protein FlhBSubName: Full=Flagellar export protein FlhB; chromosome CDS3355612 1131 - 0.471264
flhF flagellar biosynthetic protein FlhFSubName: Full=Flagellar polar localization control system flagellar assembly determinant GTPase FlhF; EC=3.6.5.-; chromosome CDS3351747 1377 - 0.46841
fliD flagellar hook-associated protein FliDSubName: Full=Flagellar filament capping protein FliD; chromosome CDS3373852 1371 - 0.420861
fliE flagellar hook-basal body complex protein FliERecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS3368304 339 - 0.433628
fliF flagellar M-ring protein FliF chromosome CDS3366570 1662 - 0.487966
fliG flagellar motor switch protein FliGRecName: Full=Flagellar motor switch protein FliG; chromosome CDS3365531 1047 - 0.454632
fliH flagellar assembly protein FliHSubName: Full=Flagellar assembly protein FliH; chromosome CDS3364594 951 - 0.474238
fliI flagellum-specific ATP synthase FliISubName: Full=Flagellar protein export ATPase FliI; EC=3.6.3.14; chromosome CDS3363288 1338 - 0.523916
fliJ flagellar protein FliJSubName: Full=Flagellar chaperone escort protein FliJ; chromosome CDS3362833 444 - 0.445946
fliK flagellar hook-length control protein FliKSubName: Full=Flagellar hook-length control protein FliK; chromosome CDS3361106 1584 - 0.454545
fliL flagellar protein FliLSubName: Full=Flagellar basal body protein FliL; chromosome CDS3360499 525 - 0.481905
fliM flagellar motor switch protein FliMRecName: Full=Flagellar motor switch protein FliM; chromosome CDS3359428 1032 - 0.466085
fliN flagellar motor switch protein FliNSubName: Full=Flagellar motor switching and energizing component FliN; chromosome CDS3359041 375 - 0.485333
fliO flagellar protein FliOSubName: Full=Flagellar export protein FliO; chromosome CDS3358599 408 - 0.458333
fliP flagellar biosynthetic protein FliP chromosome CDS3357856 744 - 0.439516
fliQ flagellar biosynthetic protein FliQSubName: Full=Flagellar export protein FliQ; chromosome CDS3357569 270 - 0.440741
fliR flagellar biosynthetic protein FliRRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS3356767 798 - 0.458647
fliS flagellar protein FliSSubName: Full=Chaperone for FliC flagellin FliS; chromosome CDS3373086 411 - 0.389294
gspD general secretion pathway protein DSubName: Full=T2aSS secretion system secretin GspD; chromosome CDS172301 2115 + 0.476123
gspE general secretion pathway protein ESubName: Full=T2aSS secretion system assembly ATPase GspE; chromosome CDS174412 1566 + 0.501916
gspF general secretion pathway protein FSubName: Full=T2aSS secretion system inner membrane platform protein GspF; chromosome CDS175981 1224 + 0.506536
gspG general secretion pathway protein GSubName: Full=T2aSS secretion system pseudopilus protein GspG; chromosome CDS177279 435 + 0.436782
gspH general secretion pathway protein HSubName: Full=T2aSS secretion system pseudopilus protein GspH; chromosome CDS177715 573 + 0.472949
gspI general secretion pathway protein ISubName: Full=T2aSS secretion system pseudopilus protein GspI; chromosome CDS178274 369 + 0.474255
motA chemotaxis motA proteinSubName: Full=Stator-force generator of H+ coupled flagellar motor MotA; chromosome CDS4466648 735 - 0.390476
motB chemotaxis motB proteinSubName: Full=Stator-force generator of H+ coupled flagellar motor MotB; chromosome CDS4465816 828 - 0.362319
mshC MSHA pilin protein MshCSubName: Full=MSHA minor pilin protein MshC; chromosome CDS4263135 474 - 0.447257
mshD MSHA pilin protein MshDSubName: Full=MshA minor pilin protein MshD; chromosome CDS4262579 567 - 0.472663
mshE MSHA biogenesis protein MshESubName: Full=MSHA pilus assembly ATPase MshE; chromosome CDS4266832 1761 - 0.488359
mshG MSHA biogenesis protein MshGSubName: Full=MSHA biogenesis protein MshG; chromosome CDS4265609 1221 - 0.478296
mshL MSHA biogenesis protein MshLSubName: Full=MSHA system outer membrane secretin MshL; chromosome CDS4270814 1683 - 0.483066
mshO MSHA biogenesis protein MshOSubName: Full=MshA minor pilin protein MshO; chromosome CDS4261731 849 - 0.465253
pilD type 4 prepilin-like proteins leader peptide processing enzymeRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS428993 927 - 0.466019
pilE type IV pilus biogenesis protein PilESubName: Full=Type IV minor pilin protein PilE; chromosome CDS3677770 393 - 0.396947
pilT twitching motility protein PilTSubName: Full=Pilus retraction protein PilT; chromosome CDS3495991 1038 - 0.463391
pilU twitching motility protein PilUSubName: Full=Pilus retraction ATPase PilU; chromosome CDS3494869 1113 - 0.473495
pilZ type IV pilus biogenesis protein pilZSubName: Full=C-di-GMP-binding protein; chromosome CDS2748445 327 - 0.477064
pomA chemotaxis motA proteinSubName: Full=Stator-force generator of Na+ coupled flagellar motor PomA; chromosome CDS1604511 768 + 0.432292
pomB sodium-driven polar flagellar protein PomBSubName: Full=Stator-force generator of Na+ coupled flagellar motor PomB; chromosome CDS1605282 927 + 0.484358