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2024-06-07 16:27:19

Gene list

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COG category: Cell motility
Genomic element: chromosome 1

Number of genes found: 100

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Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
VP0133 general secretion pathway protein D precursorSubName: Full=General secretion pathway protein D; chromosome 1 CDS143656 2028 + 0.461538
VP0134 general secretion pathway protein ESubName: Full=General secretion pathway protein E; chromosome 1 CDS145683 1503 + 0.500333
VP0135 general secretion pathway protein FSubName: Full=General secretion pathway protein F; chromosome 1 CDS147185 1218 + 0.478654
VP0136 general secretion pathway protein GSubName: Full=General secretion pathway protein G; chromosome 1 CDS148464 444 + 0.457207
VP0137 general secretion pathway protein HSubName: Full=General secretion pathway protein H; chromosome 1 CDS148938 597 + 0.448911
VP0138 general secretion pathway protein ISubName: Full=General secretion pathway protein I; chromosome 1 CDS149581 330 + 0.481818
VP0183 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome 1 CDS195458 1674 + 0.468937
VP0421 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome 1 CDS422575 1329 + 0.478555
VP0656 putative fimbrial assembly protein PilESubName: Full=Putative fimbrial assembly protein PilE; chromosome 1 CDS687192 432 - 0.43287
VP0657 putative type IV pilinSubName: Full=Putative type IV pilin; chromosome 1 CDS687685 558 + 0.433692
VP0658 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS688251 627 + 0.422648
VP0660 putative type IV pilinSubName: Full=Putative type IV pilin; chromosome 1 CDS690174 411 + 0.425791
VP0689 sodium-driven polar flagellar protein MotASubName: Full=Sodium-driven polar flagellar protein MotA; chromosome 1 CDS721356 762 + 0.5
VP0690 sodium-driven polar flagellar protein MotBSubName: Full=Sodium-driven polar flagellar protein MotB; chromosome 1 CDS722133 948 + 0.485232
VP0770 polar flagellar FlgNSubName: Full=Polar flagellar FlgN; chromosome 1 CDS807670 426 - 0.455399
VP0771 polar flagellar FlgMSubName: Full=Polar flagellar FlgM; chromosome 1 CDS808122 318 - 0.468553
VP0772 polar flagellar FlgASubName: Full=Polar flagellar FlgA; chromosome 1 CDS808567 747 - 0.460509
VP0773 chemotaxis CheVSubName: Full=Chemotaxis CheV; chromosome 1 CDS809390 927 + 0.443366
VP0774 chemotaxis methyltransferase CheRRecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; chromosome 1 CDS810328 828 + 0.451691
VP0775 polar flagellar FlgBRecName: Full=Flagellar basal body rod protein FlgB; chromosome 1 CDS811468 396 + 0.479798
VP0776 polar flagellar FlgCSubName: Full=Polar flagellar FlgC; chromosome 1 CDS811869 414 + 0.471014
VP0777 polar flagellar FlgDSubName: Full=Polar flagellar FlgD; chromosome 1 CDS812300 708 + 0.480226
VP0778 polar flagellar FlgESubName: Full=Polar flagellar FlgE; chromosome 1 CDS813039 1314 + 0.449772
VP0780 polar flagellar FlgFSubName: Full=Polar flagellar FlgF; chromosome 1 CDS814647 750 + 0.481333
VP0781 polar flagellar FlgGSubName: Full=Polar flagellar FlgG; chromosome 1 CDS815415 789 + 0.494297
VP0782 flagellar L-ring protein precursor FlgHRecName: Full=Flagellar L-ring protein 1; AltName: Full=Basal body L-ring protein 1; Flags: Precursor; chromosome 1 CDS816234 780 + 0.492308
VP0783 flagellar P-ring protein precursor FlgIRecName: Full=Flagellar P-ring protein 2; AltName: Full=Basal body P-ring protein 2; Flags: Precursor; chromosome 1 CDS817058 1092 + 0.509158
VP0784 peptidoglycan hydrolase FlgJRecName: Full=Peptidoglycan hydrolase FlgJ; EC=3.2.1.-; AltName: Full=Muramidase FlgJ; chromosome 1 CDS818166 927 + 0.477886
VP0785 polar flagellar hook associated protein type 1 FlgKSubName: Full=Polar flagellar hook associated protein type 1 FlgK; chromosome 1 CDS819254 1941 + 0.470891
VP0786 hook-associated protein type 3 FlgLSubName: Full=Hook-associated protein type 3 FlgL; chromosome 1 CDS821208 1194 + 0.453099
VP0788 polar flagellin FlaCRecName: Full=Polar flagellin C; chromosome 1 CDS822837 1155 + 0.47013
VP0790 polar flagellin FlaDRecName: Full=Polar flagellin B/D; chromosome 1 CDS824663 1137 + 0.474934
VP0791 polar flagellin FlaERecName: Full=Polar flagellin E; chromosome 1 CDS825916 1125 + 0.472
VP0942 putative fimbrial proteinSubName: Full=Putative fimbrial protein; chromosome 1 CDS983732 198 + 0.409091
VP0963 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome 1 CDS1004735 1992 - 0.463855
VP1049 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1099986 1116 + 0.455197
VP1050 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS1101061 378 + 0.452381
VP1088 putative chemotaxis transducerSubName: Full=Putative chemotaxis transducer; chromosome 1 CDS1144081 1638 + 0.459707
VP1185 putative chemotaxis transducerSubName: Full=Putative chemotaxis transducer; chromosome 1 CDS1245445 1620 + 0.475309
VP1486 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome 1 CDS1598362 1596 + 0.469925
VP1628 putative methyl-accepting chemotaxis proteinSubName: Full=Putative methyl-accepting chemotaxis protein; chromosome 1 CDS1726224 1404 + 0.459402
VP1667 putative outer membrane protein PopNSubName: Full=Putative outer membrane protein PopN; chromosome 1 CDS1783656 894 - 0.470917
VP1668 ATP synthase in type III secretion systemSubName: Full=ATP synthase in type III secretion system; chromosome 1 CDS1784736 1323 + 0.538171
VP1671 putative translocation protein in type III secretionSubName: Full=Putative translocation protein in type III secretion; chromosome 1 CDS1787842 987 + 0.487335
VP1688 putative type III secretion proteinSubName: Full=Putative type III secretion protein; chromosome 1 CDS1801133 639 - 0.471049
VP1696 putative type III secretion protein YscCSubName: Full=Putative type III secretion protein YscC; chromosome 1 CDS1806256 1899 - 0.50237
VP1752 putative fimbrial biogenesis and twitching motility proteinSubName: Full=Putative fimbrial biogenesis and twitching motility protein; chromosome 1 CDS1865751 726 + 0.449036
VP1892 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome 1 CDS1976393 1626 + 0.47048
VP1904 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome 1 CDS1987540 1884 - 0.481423
VP1981 putative methyl-accepting chemotaxis proteinSubName: Full=Putative methyl-accepting chemotaxis protein; chromosome 1 CDS2074996 2097 - 0.482117
VP2037 chemotaxis protein CheVSubName: Full=Chemotaxis protein CheV; chromosome 1 CDS2137312 954 - 0.448637
VP2126 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS2233870 1164 - 0.445876
VP2159 putative methyl-accepting chemotaxis transmembrane proteinSubName: Full=Putative methyl-accepting chemotaxis transmembrane protein; chromosome 1 CDS2271346 2037 + 0.464899
VP2191 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS2300481 4143 - 0.480087
VP2225 chemotaxis protein CheWSubName: Full=Chemotaxis protein CheW; chromosome 1 CDS2337996 495 - 0.448485
VP2228 chemotaxis protein CheBRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon; EC=3.1.1.61; chromosome 1 CDS2340416 1110 - 0.513514
VP2229 chemotaxis protein CheASubName: Full=Chemotaxis protein CheA; chromosome 1 CDS2341550 2235 - 0.497539
VP2230 chemotaxis protein CheZRecName: Full=Protein phosphatase CheZ; EC=3.1.3.-; AltName: Full=Chemotaxis protein CheZ; chromosome 1 CDS2343794 741 - 0.45749
VP2234 flagellar biosynthesis protein FlhFSubName: Full=Flagellar biosynthesis protein FlhF; chromosome 1 CDS2346696 1470 - 0.473469
VP2235 polar flagellar assembly protein FlhASubName: Full=Polar flagellar assembly protein FlhA; chromosome 1 CDS2348236 2100 - 0.494286
VP2236 polar flagellar assembly protein FlhBSubName: Full=Polar flagellar assembly protein FlhB; chromosome 1 CDS2350565 1131 - 0.493369
VP2237 polar flagellar assembly protein FliRRecName: Full=Flagellar biosynthetic protein fliR; chromosome 1 CDS2351705 783 - 0.481481
VP2238 polar flagellar assembly protein FliQSubName: Full=Polar flagellar assembly protein FliQ; chromosome 1 CDS2352496 270 - 0.451852
VP2239 polar flagellar assembly protein FliPSubName: Full=Polar flagellar assembly protein FliP; chromosome 1 CDS2352792 870 - 0.483908
VP2240 polar flagellar assembly protein FliOSubName: Full=Polar flagellar assembly protein FliO; chromosome 1 CDS2353648 414 - 0.466184
VP2241 polar flagellar switch protein FliNSubName: Full=Polar flagellar switch protein FliN; chromosome 1 CDS2354063 411 - 0.484185
VP2242 flagellar motor switch protein FliMRecName: Full=Flagellar motor switch protein FliM; chromosome 1 CDS2354525 1047 - 0.485196
VP2243 polar flagellar protein FliLSubName: Full=Polar flagellar protein FliL; chromosome 1 CDS2355579 504 - 0.492063
VP2244 polar flagellar hook-length control protein FliKSubName: Full=Polar flagellar hook-length control protein FliK; chromosome 1 CDS2356132 1932 - 0.493271
VP2245 polar flagellar assembly protein FliJSubName: Full=Polar flagellar assembly protein FliJ; chromosome 1 CDS2358238 444 - 0.475225
VP2246 polar flagellum-specific ATP synthase FliISubName: Full=Polar flagellum-specific ATP synthase FliI; chromosome 1 CDS2358688 1320 - 0.515909
VP2247 polar flagellar assembly protein FliHSubName: Full=Polar flagellar assembly protein FliH; chromosome 1 CDS2360011 801 - 0.480649
VP2248 polar flagellar motor switch protein FliGRecName: Full=Flagellar motor switch protein FliG; chromosome 1 CDS2360882 1056 - 0.491477
VP2249 polar flagellar M-ring protein FliFRecName: Full=Flagellar M-ring protein; chromosome 1 CDS2361930 1743 - 0.497992
VP2250 flagellar hook-basal body complex protein FliERecName: Full=Flagellar hook-basal body complex protein FliE; chromosome 1 CDS2363687 312 - 0.458333
VP2254 polar flagellar protein FlaJSubName: Full=Polar flagellar protein FlaJ; chromosome 1 CDS2368533 411 - 0.467153
VP2256 flagellar hook-associated protein 2 FlaHRecName: Full=Polar flagellar hook-associated protein 2; Short=HAP2; AltName: Full=Filament cap protein; AltName: Full=Flagellar cap protein; chromosome 1 CDS2369265 2013 - 0.486836
VP2257 flagellin FlaGRecName: Full=Protein FlaG; chromosome 1 CDS2371298 435 - 0.468966
VP2258 polar flagellin FlaARecName: Full=Polar flagellin A; chromosome 1 CDS2371813 1131 - 0.456233
VP2259 polar flagellin DRecName: Full=Polar flagellin B/D; chromosome 1 CDS2373231 1137 - 0.476693
VP2261 polar flagellin FRecName: Full=Polar flagellin F; chromosome 1 CDS2374631 1134 - 0.470018
VP2410 putative tight adherence TadC-related transmembrane proteinSubName: Full=Putative tight adherence TadC-related transmembrane protein; chromosome 1 CDS2530170 942 - 0.45966
VP2523 type IV pilin PilASubName: Full=Type IV pilin PilA; chromosome 1 CDS2663235 420 + 0.454762
VP2524 type IV pilin assembly protein PilBSubName: Full=Type IV pilin assembly protein PilB; chromosome 1 CDS2663664 1686 + 0.446619
VP2525 type IV pilin biogenesis protein PilCSubName: Full=Type IV pilin biogenesis protein PilC; chromosome 1 CDS2665373 1224 + 0.446078
VP2526 type IV prepilin-like proteins leader peptide processing enzymeRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome 1 CDS2666661 870 + 0.434483
VP2614 twitching motility protein PilTSubName: Full=Twitching motility protein PilT; chromosome 1 CDS2757118 1107 - 0.483288
VP2615 twitching motility protein PilTSubName: Full=Twitching motility protein PilT; chromosome 1 CDS2758255 1041 - 0.467819
VP2629 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome 1 CDS2771153 1626 + 0.45695
VP2694 putative type IV prepilin, MshOSubName: Full=Putative type IV prepilin, MshO; chromosome 1 CDS2850125 714 - 0.442577
VP2700 MSHA biogenesis protein MshGSubName: Full=MSHA biogenesis protein MshG; chromosome 1 CDS2853562 1224 - 0.457516
VP2701 MSHA biogenesis protein MshESubName: Full=MSHA biogenesis protein MshE; chromosome 1 CDS2854794 1725 - 0.492754
VP2730 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS2895445 462 + 0.465368
VP2747 putative fimbrial assembly protein PilPSubName: Full=Putative fimbrial assembly protein PilP; chromosome 1 CDS2911835 516 - 0.482558
VP2748 putative fimbrial assembly protein PilOSubName: Full=Putative fimbrial assembly protein PilO; chromosome 1 CDS2912340 594 - 0.434343
VP2749 putative fimbrial assembly protein PilNSubName: Full=Putative fimbrial assembly protein PilN; chromosome 1 CDS2912926 579 - 0.440415
VP2750 putative fimbrial assembly protein PilMSubName: Full=Putative fimbrial assembly protein PilM; chromosome 1 CDS2913488 1017 - 0.45821
VP2827 methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome 1 CDS2994794 1881 + 0.479001
VP2857 putative periplasmic protein CpxPSubName: Full=Putative periplasmic protein CpxP; chromosome 1 CDS3024258 513 - 0.473684
VP2950 putative flagellar protein FliLSubName: Full=Putative flagellar protein FliL; chromosome 1 CDS3154717 411 + 0.437956