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2024-06-10 18:32:25

Gene list

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COG category: Cell motility
Genomic element: chromosome

Number of genes found: 86

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Idiomarina loihiensis L2TR, L2TR
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA IL2209 Methyl-accepting chemotaxis protein (contains HAMP domain)SubName: Full=Methyl-accepting chemotaxis protein (Contains HAMP domain); chromosome CDS2360593 1776 - 0.487613
NA IL1285 Uncharacterized conserved secreted or membrane proteinSubName: Full=Uncharacterized conserved secreted or membrane protein; chromosome CDS1381554 1746 + 0.443872
NA IL0294 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS306833 441 + 0.446712
NA IL1543 Uncharacterized conserved membrane proteinSubName: Full=Uncharacterized conserved membrane protein; chromosome CDS1662399 507 - 0.459566
NA IL0645 Predicted membrane proteinSubName: Full=Predicted membrane protein; chromosome CDS702600 900 + 0.385556
NA IL2557 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2741556 147 - 0.47619
NA IL1619 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1734884 1005 + 0.459701
NA IL0791 Uncharacterized conserved proteinSubName: Full=Uncharacterized conserved protein; chromosome CDS848825 489 + 0.464213
NA IL2330 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2497536 1350 - 0.428889
NA IL2343 Methyl-accepting chemotaxis protein (contains HAMP domain)SubName: Full=Methyl-accepting chemotaxis protein (Contains HAMP domain); chromosome CDS2513636 1641 + 0.45582
NA IL2021 Type II secretory pathway, pseudopilin PulG-likeSubName: Full=Type II secretory pathway, pseudopilin PulG-like; chromosome CDS2164023 393 - 0.524173
NA IL0279 Uncharacterized conserved proteinSubName: Full=Uncharacterized conserved protein; chromosome CDS294303 318 + 0.5
NA IL1296 Methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome CDS1393875 1641 + 0.452773
NA IL0202 Methyl-accepting chemotaxis protein (HAMP, Cache domains)SubName: Full=Methyl-accepting chemotaxis protein (HAMP, Cache domains); chromosome CDS220762 1893 + 0.486529
NA IL1149 Chemotaxis protein CheVSubName: Full=Chemotaxis protein CheV; chromosome CDS1228978 936 - 0.441239
NA IL1776 Methyl-accepting chemotaxis protein (CHASE3,HAMP,MCP domains)SubName: Full=Methyl-accepting chemotaxis protein (CHASE3,HAMP,MCP domains); chromosome CDS1910678 1839 - 0.457314
NA IL2183 Secreted protein, containing von Willebrand factor (vWF) type A domainSubName: Full=Secreted protein, containing von Willebrand factor (VWF) type A domain; chromosome CDS2332576 1059 - 0.494806
NA IL1421 Methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome CDS1529845 1992 + 0.433233
NA IL2172 Methyl-accepting chemotaxis proteinSubName: Full=Methyl-accepting chemotaxis protein; chromosome CDS2315730 1554 - 0.499357
NA IL1068 Methyl-accepting chemotaxis protein with ligand-binding sensor domain and HAMP domainSubName: Full=Methyl-accepting chemotaxis protein with ligand-binding sensor domain and HAMP domain; chromosome CDS1147657 1632 - 0.485294
NA IL1880 Methyl-accepting chemotaxis protein (contains HAMP domain)SubName: Full=Methyl-accepting chemotaxis protein (Contains HAMP domain); chromosome CDS2011364 1692 + 0.478723
NA IL0510 Chemotaxis response regulatorSubName: Full=Chemotaxis response regulator; chromosome CDS535523 1023 + 0.518084
cheA IL1114 Chemotaxis-specific histidine kinaseSubName: Full=Chemotaxis-specific histidine kinase; chromosome CDS1194698 2151 - 0.482566
cheB IL1113 Chemotaxis response regulatorRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase; EC=3.1.1.61; chromosome CDS1193522 1161 - 0.507321
cheR IL1148 Methylase of chemotaxis methyl-accepting proteinsRecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; chromosome CDS1227986 837 - 0.459976
cheW_1 IL1110 Chemotaxis protein CheWSubName: Full=Chemotaxis protein CheW; chromosome CDS1191347 504 - 0.470238
cheW_2 IL1111 CheW-like domain containing proteinSubName: Full=CheW-like domain containing protein; chromosome CDS1191872 858 - 0.455711
cheX IL1932 Chemotaxis protein CheXSubName: Full=Chemotaxis protein CheX; chromosome CDS2059535 471 + 0.409766
cheZ IL1115 Chemotaxis protein CheZRecName: Full=Protein phosphatase CheZ; EC=3.1.3.-; AltName: Full=Chemotaxis protein CheZ; chromosome CDS1196862 750 - 0.466667
fimV IL1018 Probable Tfp pilus assembly protein FimV , contains LysM domainSubName: Full=Probable Tfp pilus assembly protein FimV , contains LysM domain; chromosome CDS1087317 2349 - 0.48957
flaG IL1135 FlaGSubName: Full=FlaG; chromosome CDS1214884 411 - 0.459854
flgA IL1150 Flagellar basal body P-ring biosynthesis proteinSubName: Full=Flagellar basal body P-ring biosynthesis protein; chromosome CDS1230076 723 + 0.455048
flgB IL1147 Flagellar basal body proteinRecName: Full=Flagellar basal body rod protein FlgB; chromosome CDS1227481 405 - 0.518519
flgC IL1146 Flagellar basal body rod proteinSubName: Full=Flagellar basal body rod protein; chromosome CDS1227022 453 - 0.492274
flgD IL1145 Flagellar hook capping proteinSubName: Full=Flagellar hook capping protein; chromosome CDS1226324 684 - 0.483918
flgE IL1144 Flagellar hook protein FlgESubName: Full=Flagellar hook protein FlgE; chromosome CDS1224959 1350 - 0.468889
flgF IL1143 Flagella basal body rod proteinSubName: Full=Flagella basal body rod protein; chromosome CDS1224096 744 - 0.489247
flgG IL1142 Flagella basal body rod proteinSubName: Full=Flagella basal body rod protein; chromosome CDS1223286 789 - 0.461343
flgH IL1141 Flagellar basal body L-ring proteinRecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor; chromosome CDS1222577 675 - 0.485926
flgI IL1140 Flagellar basal-body P-ring proteinRecName: Full=Flagellar P-ring protein; AltName: Full=Basal body P-ring protein; Flags: Precursor; chromosome CDS1221466 1101 - 0.501362
flgJ IL1139 Flagellum-specific muramidaseSubName: Full=Flagellum-specific muramidase; chromosome CDS1220474 978 - 0.519427
flgK IL1138 Flagellar hook-associated proteinSubName: Full=Flagellar hook-associated protein; chromosome CDS1218368 2016 - 0.464286
flgL IL1137 FlagellinSubName: Full=Flagellin; chromosome CDS1217148 1215 - 0.444444
flgM IL1151 Negative regulator of flagellin synthesisSubName: Full=Negative regulator of flagellin synthesis; chromosome CDS1230915 324 + 0.459877
flgN IL1152 Flagellar synthesis protein FlgNSubName: Full=Flagellar synthesis protein FlgN; chromosome CDS1231238 402 + 0.452736
flhA IL1120 Flagellar biosynthesis protein FlhASubName: Full=Flagellar biosynthesis protein FlhA; chromosome CDS1201040 2154 - 0.488394
flhB IL1187 Flagellar biosynthesis proten FlhBSubName: Full=Flagellar biosynthesis proten FlhB; chromosome CDS1276831 1128 - 0.458333
flhF IL1119 Flagellar biosynthetic protein FlhFSubName: Full=Flagellar biosynthetic protein FlhF; chromosome CDS1199693 1335 - 0.491386
fliC IL1136 FlagellinSubName: Full=Flagellin; chromosome CDS1215509 1416 - 0.472458
fliD IL1134 Flagellar capping proteinSubName: Full=Flagellar capping protein; chromosome CDS1213480 1392 - 0.443247
fliE IL1201 Flagellar hook-basal body proteinRecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS1289532 333 - 0.468468
fliF IL1200 Flagellar basal body M-ring proteinRecName: Full=Flagellar M-ring protein; chromosome CDS1287793 1713 - 0.483946
fliG IL1199 Flagellar motor switch proteinRecName: Full=Flagellar motor switch protein FliG; chromosome CDS1286754 1047 - 0.487106
fliH_1 IL1198 type III secretory pathway proteinSubName: Full=Type III secretory pathway protein; chromosome CDS1285990 750 - 0.474667
fliI IL1197 type III secretory pathway ATPaseSubName: Full=Type III secretory pathway ATPase; chromosome CDS1284637 1350 - 0.514815
fliJ IL1196 Flagellar biosynthesis chaperoneSubName: Full=Flagellar biosynthesis chaperone; chromosome CDS1284190 444 - 0.459459
fliK IL1195 Flagellar hook-length control proteinSubName: Full=Flagellar hook-length control protein; chromosome CDS1282299 1767 - 0.487832
fliL_1 IL0266 Flagellar basal body-associated proteinSubName: Full=Flagellar basal body-associated protein; chromosome CDS280311 399 + 0.45614
fliL_2 IL1194 Flagellar basal body-associated proteinSubName: Full=Flagellar basal body-associated protein; chromosome CDS1281688 543 - 0.475138
fliM IL1193 Flagellar motor switch proteinRecName: Full=Flagellar motor switch protein FliM; chromosome CDS1280607 1071 - 0.463119
fliN IL1192 Flagellar motor switchSubName: Full=Flagellar motor switch; chromosome CDS1280120 456 - 0.473684
fliO IL1191 Flagellar biosynthesis proteinSubName: Full=Flagellar biosynthesis protein; chromosome CDS1279795 324 - 0.487654
fliP IL1190 Flagellar biosynthesis protein FliPSubName: Full=Flagellar biosynthesis protein FliP; chromosome CDS1279052 747 - 0.471218
fliQ IL1189 Flagellar biosynthesis protein FliQSubName: Full=Flagellar biosynthesis protein FliQ; chromosome CDS1278774 270 - 0.455556
fliR IL1188 Flagellar biosynthesis protein FliRRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS1277989 786 - 0.474555
fliS IL1133 Flagellin-specific chaperone FliSSubName: Full=Flagellin-specific chaperone FliS; chromosome CDS1213041 423 - 0.446809
motA IL2135 Flagellar motor componentSubName: Full=Flagellar motor component; chromosome CDS2273704 768 - 0.471354
motB IL2134 Flagellar motor proteinSubName: Full=Flagellar motor protein; chromosome CDS2272763 939 - 0.490948
mshE IL0370 Type II secretory pathway, ATPaseSubName: Full=Type II secretory pathway, ATPase; chromosome CDS385908 1716 + 0.505827
mshG IL0371 Type II secretory pathwaySubName: Full=Type II secretory pathway; chromosome CDS387623 1239 + 0.48184
mshI_2 IL0364 Type II secretory pathway componentSubName: Full=Type II secretory pathway component; chromosome CDS380682 609 + 0.464696
mshL IL0367 Type II secretory pathwaySubName: Full=Type II secretory pathway; chromosome CDS382249 1674 + 0.467145
pilF IL2036 Tfp pilus assembly protein PilFSubName: Full=Tfp pilus assembly protein PilF; chromosome CDS2179469 456 - 0.473684
pilT IL1973 Twitching motility ATPaseSubName: Full=Twitching motility ATPase; chromosome CDS2105849 1035 - 0.480193
pppD IL0453 Pilin protein PilASubName: Full=Pilin protein PilA; chromosome CDS468767 483 - 0.498965
pulD IL2026 Type II secretory pathway, component PulDSubName: Full=Type II secretory pathway, component PulD; chromosome CDS2168106 2127 - 0.476258
pulE IL0452 Type II secretory pathway, ATPase PulESubName: Full=Type II secretory pathway, ATPase PulE; chromosome CDS467454 1314 - 0.513699
pulE IL2025 Type II secretory pathway, ATPase PulE-likeSubName: Full=Type II secretory pathway, ATPase PulE-like; chromosome CDS2166629 1485 - 0.501683
pulF IL0451 Type II secretory pathway, PulF-likeSubName: Full=Type II secretory pathway, PulF-like; chromosome CDS466289 1179 - 0.476675
pulF IL2024 Type II secretory pathway, component PulFSubName: Full=Type II secretory pathway, component PulF; chromosome CDS2165399 1227 - 0.471068
pulG IL2023 Type II secretory pathway, pseudopilin PulGSubName: Full=Type II secretory pathway, pseudopilin PulG; chromosome CDS2164959 438 - 0.465753
pulH IL2022 Type II secretory pathway, component PulHSubName: Full=Type II secretory pathway, component PulH; chromosome CDS2164418 552 - 0.472826
pulO IL0450 Type II pili prepilin peptidase PilD/XcpARecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS465413 861 - 0.511034
tadC IL0901 Flp pilus assembly protein TadCSubName: Full=Flp pilus assembly protein TadC; chromosome CDS956124 714 - 0.414566
tap IL2235 Methyl-accepting chemotaxis protein (contains HAMP domain)SubName: Full=Methyl-accepting chemotaxis protein (Contains HAMP domain); chromosome CDS2389192 2001 + 0.458771
trg IL0610 Methyl-accepting chemotaxis protein (contains HAMP domain)SubName: Full=Methyl-accepting chemotaxis protein (Contains HAMP domain); chromosome CDS662042 1626 - 0.46556