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2024-06-02 04:11:11

Gene list

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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome 1

Number of genes found: 26

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA3214 putative UDP-N-acetylmuramate-alanine ligaseRecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; chromosome 1 CDS166699 1464 - 0.438525
NA PBPRA3223 putative S-adenosylmethionine-dependent methyltransferaseinvolved in cell envelope biogenesisRecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; chromosome 1 CDS177891 948 - 0.438819
NA PBPRA3316 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS280962 723 - 0.426003
NA PBPRA3215 putative UDP-N-acetylglucosamine-N-acetylmuramyl-(pentape ptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferaseRecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; chromosome 1 CDS168175 1083 - 0.480148
ALR PBPRA3385 putative alanine racemaseRecName: Full=Alanine racemase; EC=5.1.1.1; chromosome 1 CDS342444 1215 + 0.503704
ALR PBPRA3330 putative alanine racemase, biosyntheticRecName: Full=Alanine racemase; EC=5.1.1.1; chromosome 1 CDS295259 1080 - 0.468519
AMIB PBPRA3353 putative N-acetylmuramoyl-L-alanine amidaseSubName: Full=Putative N-acetylmuramoyl-L-alanine amidase; chromosome 1 CDS317961 1728 - 0.417245
C0111 PBPRA3213 hypothetical cell division protein FtsQRecName: Full=Cell division protein FtsQ; chromosome 1 CDS165672 762 - 0.417323
ECS3596 PBPRA3072 hypothetical lipoprotein NlpDSubName: Full=Hypothetical lipoprotein NlpD; chromosome 1 CDS26597 909 - 0.409241
LEPA PBPRA3091 putative GTP-binding protein LepARecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; chromosome 1 CDS47109 1794 - 0.426421
LPXC PBPRA3210 putative UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseRecName: Full=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; EC=3.5.1.-; AltName: Full=UDP-3-O-acyl-GlcNAc deacetylase; chromosome 1 CDS162083 948 - 0.432489
MRAY PBPRA3218 putativephospho-N-acetylmuramoyl-pentapeptide-transferaseRecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; chromosome 1 CDS171799 1083 - 0.437673
MRCB PBPRA3167 putative penicillin-binding protein 1BSubName: Full=Putative penicillin-binding protein 1B; chromosome 1 CDS108753 2424 - 0.469472
MURD PBPRA3217 putative UDP-N-acetylmuramoylalanine-D-glutamate ligaseRecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; chromosome 1 CDS170455 1344 - 0.453869
PLU3660 PBPRA3221 putative division protein FtsI; penicillin-binding proteinSubName: Full=Putative division protein FtsI penicillin-binding protein; chromosome 1 CDS175816 1755 - 0.460399
PM1957 PBPRA3268 hypothetical rod shape-determining protein MreDSubName: Full=Hypothetical rod shape-determining protein MreD; chromosome 1 CDS219536 489 - 0.433538
S0084 PBPRA3220 putativeUDP-N-acetylmuramoylalanyl-D-glutamate-- 2,6-diaminopimelateligaseRecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13; AltName: Full=Meso-A2pm-adding enzyme; AltName: Full=Meso-diaminopimelate-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; chromosome 1 CDS174281 1521 - 0.454306
S3163 PBPRA3156 putative membrane-bound lytic mureintransglycosylase CSubName: Full=Putative membrane-bound lytic mureintransglycosylase C; chromosome 1 CDS104598 1164 + 0.418385
S3505 PBPRA3269 putative rod shape-determining protein MreCRecName: Full=Cell shape-determining protein MreC; AltName: Full=Cell shape protein MreC; chromosome 1 CDS220014 861 - 0.45993
STY0144 PBPRA3219 hypotheticalUDP-N-acetylmuramoylalanyl-D- glutamyl-2,6-diaminopimelate-- D-alanyl-D-alanyl ligaseRecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; chromosome 1 CDS172878 1407 - 0.443497
STY3223 PBPRA3129 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS79106 885 - 0.40678
VP2496 PBPRA3192 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS137994 2331 - 0.411411
VP2733 PBPRA3329 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS293984 1251 - 0.450839
VP2736 PBPRA3332 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS298010 756 + 0.411376
VV0461 PBPRA3242 putativeUDP-N-acetylglucosamine1-carboxyvinyltra nsferaseRecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase; Short=EPT; chromosome 1 CDS194172 1263 - 0.456849
VV11426 PBPRA3291 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS246150 1770 + 0.432768