Gene list
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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome
Number of genes found: 206
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Shewanella oneidensis MR-1, MR-1 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
SO0047 | carboxyl-terminal protease, putative | SubName: Full=Periplasmic C-terminal peptidase S41 family; EC=3.4.21.102; | chromosome | CDS | 53199 | 1209 | - | 0.462366 | |
SO0061 | lipoprotein, NLP/P60 family | SubName: Full=Family C40 peptidase lipoprotein NlpC; | chromosome | CDS | 68407 | 465 | + | 0.464516 | |
SO0067 | penicillin-binding protein 1C, putative | SubName: Full=Penicillin binding protein 1C PbpC; | chromosome | CDS | 78057 | 2283 | + | 0.505037 | |
SO0121 | conserved hypothetical protein | chromosome | CDS | 130527 | 1179 | + | 0.497031 | ||
SO0205 | hypothetical protein | chromosome | CDS | 213168 | 393 | + | 0.475827 | ||
SO0306 | hypothetical protein | chromosome | CDS | 311176 | 1512 | - | 0.475529 | ||
SO0312 | outer membrane porin, putative | SubName: Full=Outer membrane porin; | chromosome | CDS | 317544 | 1155 | - | 0.485714 | |
SO0363 | hypothetical protein | SubName: Full=Nucleoside-diphosphate-sugar pyrophosphorylase; | chromosome | CDS | 373652 | 882 | + | 0.489796 | |
SO0428 | conserved hypothetical protein | SubName: Full=Bifunctional outer membrane translocase / extracellular lipase PlpD; | chromosome | CDS | 449534 | 2211 | + | 0.443238 | |
SO0518 | outer membrane efflux family protein, putative | SubName: Full=Heavy metal efflux pump secretin component CzcC family; | chromosome | CDS | 539029 | 1359 | + | 0.502575 | |
SO0519 | cation efflux protein, putative | SubName: Full=Heavy metal efflux pump MFP component CzcB family; | chromosome | CDS | 540393 | 1302 | + | 0.519201 | |
SO0588 | transporter, putative | SubName: Full=Small conductance mechanosensitive ion channel protein MscS family; | chromosome | CDS | 613120 | 3204 | - | 0.454432 | |
SO0820 | HlyD family secretion protein | SubName: Full=ABC-type macrolide export systemMFP component MacA; | chromosome | CDS | 834972 | 1218 | + | 0.517241 | |
SO0822 | outer membrane efflux family protein | SubName: Full=ABC-type macrolide export system secretin component MacC; | chromosome | CDS | 838167 | 1419 | + | 0.523608 | |
SO0934 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 965457 | 738 | + | 0.448509 | |
SO0946 | conserved hypothetical protein | chromosome | CDS | 980436 | 1128 | - | 0.469858 | ||
SO0961 | conserved hypothetical protein | chromosome | CDS | 996496 | 453 | + | 0.467991 | ||
SO1048 | membrane protein, putative | SubName: Full=Inner membrane protein LrgB; | chromosome | CDS | 1085613 | 735 | + | 0.488435 | |
SO1165 | rare lipoprotein A | SubName: Full=Septal ring lipoprotein RlpA; | chromosome | CDS | 1207687 | 852 | - | 0.456573 | |
SO1166 | membrane-bound lytic transglycosylase, putative | SubName: Full=Lytic murein transglycosylase B MltB; EC=3.2.1.-; | chromosome | CDS | 1208522 | 1065 | - | 0.443192 | |
SO1173 | rare lipoprotein B | RecName: Full=LPS-assembly lipoprotein LptE; Flags: Precursor; | chromosome | CDS | 1215265 | 495 | - | 0.488889 | |
SO1215 | outer membrane protein OmpK, putative | SubName: Full=Nucleoside-specific outer membrane porin OmpK; | chromosome | CDS | 1262531 | 852 | + | 0.411972 | |
SO1295 | major outer membrane lipoprotein, putative | SubName: Full=Murein lipoprotein Lpp; | chromosome | CDS | 1345223 | 267 | - | 0.445693 | |
SO1314 | peptidase, M23/M37 family | chromosome | CDS | 1369676 | 1449 | - | 0.465148 | ||
SO1420 | outer membrane porin, putative | SubName: Full=Metal-induced outer membrane porin IfcO family; | chromosome | CDS | 1478439 | 1038 | + | 0.408478 | |
SO1447 | retinol acyltransferase domain protein | SubName: Full=Retinol acyltransferase domain protein; | chromosome | CDS | 1508397 | 723 | - | 0.504841 | |
SO1557 | outer membrane porin, putative | SubName: Full=Outer membrane phosphoporin; | chromosome | CDS | 1633333 | 966 | + | 0.42236 | |
SO1605 | lipoprotein, putative | SubName: Full=Lipoprotein; | chromosome | CDS | 1688813 | 576 | + | 0.491319 | |
SO1636 | membrane-associated zinc metalloprotease, putative | SubName: Full=RseA degrading zinc metalloprotease RseP; EC=3.4.24.-; | chromosome | CDS | 1717535 | 1371 | + | 0.47046 | |
SO1637 | bacterial surface antigen | chromosome | CDS | 1718937 | 2481 | + | 0.455865 | ||
SO1662 | conserved hypothetical protein | chromosome | CDS | 1750121 | 408 | - | 0.419118 | ||
SO1673 | outer membrane protein OmpW, putative | SubName: Full=Outer membrane protein OmpW; | chromosome | CDS | 1759718 | 645 | + | 0.413953 | |
SO1705 | conserved hypothetical protein | chromosome | CDS | 1793878 | 927 | + | 0.545847 | ||
SO1745 | 3-beta hydroxysteroid dehydrogenase/isomerase family protein | SubName: Full=Polyolefin biosynthetic pathway dehydrogenase/isomerase OleD; | chromosome | CDS | 1825758 | 1164 | + | 0.497423 | |
SO1821 | outer membrane porin, putative | SubName: Full=Outer membrane porin; | chromosome | CDS | 1912701 | 1197 | + | 0.433584 | |
SO1881 | HlyD family-related protein | SubName: Full=HAE1 family efflux pump MFP component; | chromosome | CDS | 1977241 | 1083 | + | 0.476454 | |
SO1925 | HlyD family secretion protein | SubName: Full=RND superfamily efflux pump MFP component; | chromosome | CDS | 2027826 | 1065 | - | 0.443192 | |
SO1947 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2049972 | 345 | - | 0.481159 | |
SO1994 | membrane-bound lytic transglycolase-related protein | SubName: Full=Membrane-bound lytic transglycosylase MltB_2 family; EC=2.4.-.-; | chromosome | CDS | 2093972 | 1302 | + | 0.489247 | |
SO2040 | soluble lytic murein transglycosylase, putative | SubName: Full=Soluble lytic murein transglycosylase SltY; EC=4.2.2.-; | chromosome | CDS | 2136430 | 1926 | - | 0.464174 | |
SO2077 | acyltransferase domain protein | chromosome | CDS | 2173796 | 378 | - | 0.449735 | ||
SO2088 | lipid A biosynthesis acyltransferase, putative | SubName: Full=KDO 2-(Lauroyl)-lipid IVA acyltransferase LpxM; EC=2.3.1.-; | chromosome | CDS | 2184640 | 939 | + | 0.456869 | |
SO2114 | conserved hypothetical protein | SubName: Full=Outer membrane protein Omp85 family; | chromosome | CDS | 2215857 | 1857 | - | 0.465805 | |
SO2180 | peptidase, M23/M37 family | chromosome | CDS | 2291918 | 936 | + | 0.508547 | ||
SO2194 | OmpA family protein | SubName: Full=Sortase system OmpA family protein PdsO; | chromosome | CDS | 2306555 | 810 | + | 0.516049 | |
SO2196 | LPXTG-site transpeptidase family protein | chromosome | CDS | 2309797 | 687 | + | 0.483261 | ||
SO2259 | lipoprotein releasing system transmembrane protein LolC, putative | SubName: Full=ABC-type lipoprotein release system permease component LolC; | chromosome | CDS | 2374163 | 1251 | + | 0.495604 | |
SO2467 | adhesion-related protein | chromosome | CDS | 2588101 | 375 | - | 0.48 | ||
SO2472 | D-alanyl-D-alanine carboxypeptidase-related protein | SubName: Full=D-alanyl-D-alanine carboxypeptidase VanY family; EC=3.4.16.-; | chromosome | CDS | 2594218 | 759 | + | 0.516469 | |
SO2476 | polysaccharide biosynthesis protein | SubName: Full=Polysaccharide biosynthesis protein; | chromosome | CDS | 2596996 | 1188 | + | 0.459596 | |
SO2554 | conserved hypothetical protein | chromosome | CDS | 2686023 | 357 | + | 0.484594 | ||
SO2564 | transglycosylase, Slt family | SubName: Full=Membrane-bound lytic peptidoglycan transglycosylase D; EC=4.2.2.-; | chromosome | CDS | 2693552 | 1548 | + | 0.446382 | |
SO2601 | carboxyl-terminal protease | SubName: Full=Periplasmic C-terminal processing protease Prc; EC=3.4.21.102; | chromosome | CDS | 2736274 | 2049 | - | 0.454368 | |
SO2622 | conserved hypothetical protein | SubName: Full=Outer membrane protein SlyB-like protein; | chromosome | CDS | 2758935 | 471 | - | 0.471338 | |
SO2712 | hypothetical protein | SubName: Full=Predicted thiamine kinase ThiK; | chromosome | CDS | 2830243 | 1140 | - | 0.484211 | |
SO2773 | hypothetical protein | SubName: Full=Predicted inner membrane protein; | chromosome | CDS | 2895784 | 369 | - | 0.457995 | |
SO2842 | peptidase, M23/M37 family | chromosome | CDS | 2959098 | 1305 | - | 0.42682 | ||
SO2848 | hypothetical protein | SubName: Full=Putative periplasmic protein; | chromosome | CDS | 2967086 | 396 | - | 0.444444 | |
SO2861 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2985205 | 852 | - | 0.483568 | |
SO2943 | conserved domain protein | chromosome | CDS | 3081823 | 258 | - | 0.465116 | ||
SO2948 | prophage LambdaSo, tail assembly protein K, putative | SubName: Full=Lambda phage tail assembly protein K; | chromosome | CDS | 3085846 | 714 | - | 0.505602 | |
SO2981 | hypothetical protein | SubName: Full=Lambda phage uncharacterized protein; | chromosome | CDS | 3109165 | 585 | - | 0.464957 | |
SO3060 | outer membrane porin, putative | SubName: Full=Outer membrane porin; | chromosome | CDS | 3174321 | 1170 | - | 0.466667 | |
SO3102 | AcrA/AcrE family protein | SubName: Full=Thiophosphate efflux pump MFP component; | chromosome | CDS | 3227970 | 1014 | + | 0.488166 | |
SO3161 | glucose-1-phosphate thymidylyltransferase-related protein | chromosome | CDS | 3298073 | 195 | - | 0.374359 | ||
SO3163 | lipoprotein | SubName: Full=Outer membrane lipoprotein NlpE; | chromosome | CDS | 3300032 | 453 | + | 0.439294 | |
SO3167 | dTDP-glucose 4,6-dehydratase | RecName: Full=dTDP-glucose 4,6-dehydratase; EC=4.2.1.46; | chromosome | CDS | 3302662 | 1032 | - | 0.455426 | |
SO3171 | polysaccharide biosynthesis protein | SubName: Full=Polysaccharide biosynthesis protein epimerase/dehydratase-like WbfY; | chromosome | CDS | 3307620 | 1941 | - | 0.442555 | |
SO3172 | galactosyl transferase | SubName: Full=Galactosyl transferase WbfU; | chromosome | CDS | 3309691 | 558 | - | 0.387097 | |
SO3173 | UDP-galactose 4-epimerase, putative | SubName: Full=NAD-dependent epimerase/dehydratase family protein; | chromosome | CDS | 3310251 | 930 | - | 0.469892 | |
SO3174 | glycosyl transferase, group 1 family protein | SubName: Full=O-antigen biosynthesis glycosyl transferase family 4; | chromosome | CDS | 3311216 | 1134 | - | 0.38448 | |
SO3176 | glycosyl transferase, group 1 family protein | SubName: Full=O-antigen biosynthesis glycosyl transferase family 4; | chromosome | CDS | 3314278 | 1122 | - | 0.365419 | |
SO3180 | glycosyl transferase, group 2 family protein | SubName: Full=Glycosyl transferase family 2 WbnI; | chromosome | CDS | 3318973 | 897 | - | 0.317726 | |
SO3183 | perosamine synthetase-related protein | SubName: Full=Perosamine synthetase-related protein; | chromosome | CDS | 3321791 | 951 | - | 0.309148 | |
SO3185 | polysaccharide biosynthesis protein | SubName: Full=Enzyme for biosynthesis of dTDP-Qui4N; | chromosome | CDS | 3323470 | 1077 | - | 0.349118 | |
SO3189 | polysaccharide biosynthesis protein | SubName: Full=UDP-GlkcNAc C4 epimerase WbpP; EC=5.1.3.7; | chromosome | CDS | 3327042 | 1023 | - | 0.376344 | |
SO3190 | polysaccharide biosynthesis protein | SubName: Full=UDP-N-acetyl-d-glucosamine 6-dehydrogenase WbpA; | chromosome | CDS | 3328151 | 1281 | - | 0.416862 | |
SO3191 | chain length determinant protein | SubName: Full=Polysaccharide chain length determinant Wzz; | chromosome | CDS | 3329608 | 990 | - | 0.417172 | |
SO3193 | polysaccharide biosynthesis protein | SubName: Full=Outer membrane polysaccharide export channel protein Wza; | chromosome | CDS | 3331303 | 2766 | - | 0.441432 | |
SO3197 | vacJ lipoprotein, putative | SubName: Full=Phospholipid transport-associated protein MlaA; | chromosome | CDS | 3338754 | 786 | - | 0.431298 | |
SO3261 | polysaccharide biosynthesis related-protein | SubName: Full=Polysaccharide biosynthesis related-protein; | chromosome | CDS | 3396928 | 873 | + | 0.436426 | |
SO3269 | cytidylyltransferase domain protein | SubName: Full=Flagellin modification protein; | chromosome | CDS | 3406993 | 1725 | + | 0.431304 | |
SO3270 | polysaccharide biosynthesis protein | SubName: Full=C4 aminotransferase for PseB product PseC; | chromosome | CDS | 3408733 | 1146 | - | 0.4363 | |
SO3271 | polysaccharide biosynthesis protein | SubName: Full=Bifunctional UDP GlcNAc C6 dehydratase/C5 epimerase PseB; EC=5.1.3.-; | chromosome | CDS | 3409875 | 996 | - | 0.456827 | |
SO3278 | conserved hypothetical protein | SubName: Full=RND superfamily efflux pump MFP component; | chromosome | CDS | 3417827 | 1125 | + | 0.480889 | |
SO3288 | transglycosylase, Slt family | chromosome | CDS | 3433162 | 1374 | + | 0.467249 | ||
SO3339 | OmpA family protein | SubName: Full=Outer membrane porin OmpA family; | chromosome | CDS | 3486976 | 591 | + | 0.409475 | |
SO3340 | conserved hypothetical protein | SubName: Full=Small conductance mechanosensitive ion channel protein MscS; | chromosome | CDS | 3487598 | 828 | + | 0.422705 | |
SO3387 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3525798 | 510 | + | 0.433333 | |
SO3411 | protease, putative | SubName: Full=Predicted non-catalytic member of peptidase subfamily S41B; | chromosome | CDS | 3547932 | 3285 | - | 0.482496 | |
SO3483 | HlyD family secretion protein | SubName: Full=HAE1 family efflux pump MFP component; | chromosome | CDS | 3629924 | 1110 | + | 0.476577 | |
SO3506 | SIS domain protein | SubName: Full=Glucosamine-6-phosphate deaminase NagB; EC=3.5.99.6; | chromosome | CDS | 3657713 | 999 | - | 0.487487 | |
SO3545 | OmpA family protein | chromosome | CDS | 3701745 | 1113 | + | 0.443845 | ||
SO3592 | conserved hypothetical protein | chromosome | CDS | 3755361 | 915 | + | 0.424044 | ||
SO3634 | nucleotidyltransferase family protein | SubName: Full=Nucleotidyltransferase family protein; | chromosome | CDS | 3791930 | 681 | - | 0.493392 | |
SO3685 | curli production assembly/transport component CsgG, putative | SubName: Full=Curli secretion apparatus outer membrane lipoprotein component CsgG; | chromosome | CDS | 3835495 | 807 | - | 0.478315 | |
SO3694 | conserved hypothetical protein | SubName: Full=ABC-type macrolide family export system MFP component; | chromosome | CDS | 3844363 | 1260 | - | 0.492857 | |
SO3731 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3874192 | 1548 | + | 0.428295 | |
SO3810 | OmpA-like transmembrane domain protein | SubName: Full=Outer membrane protein OmpA-like protein; | chromosome | CDS | 3963112 | 564 | - | 0.439716 | |
SO3811 | lipoprotein, putative | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3963812 | 567 | + | 0.440917 | |
SO3896 | outer membrane porin, putative | SubName: Full=Outer membrane porin Omp35; | chromosome | CDS | 4042055 | 1110 | + | 0.414414 | |
SO3931 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4076330 | 744 | + | 0.395161 | |
SO3969 | OmpA family protein | SubName: Full=Putative outer membrane lipoprotein YiaD; | chromosome | CDS | 4108149 | 687 | - | 0.509461 | |
SO4015 | conserved hypothetical protein | SubName: Full=HAE1 family effllux pump MFP component; | chromosome | CDS | 4160082 | 1308 | - | 0.4763 | |
SO4017 | transglycosylase, Slt family | SubName: Full=Membrane bound lytic murein transglycosylase MltD; EC=4.2.2.-; | chromosome | CDS | 4163355 | 1434 | + | 0.466527 | |
SO4043 | TonB domain protein | SubName: Full=TonB mediated energy transduction system energy transducer component TonB; | chromosome | CDS | 4196803 | 1110 | + | 0.454054 | |
SO4089 | HlyD family secretion protein | SubName: Full=ABC-type efflux system MFP component; | chromosome | CDS | 4243248 | 975 | - | 0.527179 | |
SO4090 | outer membrane efflux protein | SubName: Full=ABC-type efflux system secretin component; | chromosome | CDS | 4244212 | 1422 | - | 0.49789 | |
SO4131 | conserved hypothetical protein | SubName: Full=Nucleoside-specifc outer membrane porin Tsx family; | chromosome | CDS | 4288941 | 753 | + | 0.440903 | |
SO4148 | HlyD family secretion protein | SubName: Full=Type I protein secretion system MFP component HlyD family; | chromosome | CDS | 4308263 | 1326 | + | 0.441176 | |
SO4174 | NAD dependent epimerase/dehydratase family protein | SubName: Full=dTDP-4-dehydrorhamnose reductase family; | chromosome | CDS | 4346500 | 921 | - | 0.51683 | |
SO4178 | conserved hypothetical protein | SubName: Full=Membrane anchored protein MxdC; | chromosome | CDS | 4349988 | 1056 | - | 0.487689 | |
SO4179 | glycosyl transferase, group 2 family protein | chromosome | CDS | 4351043 | 1212 | - | 0.469472 | ||
SO4212 | peptidase, M23/M37 family | SubName: Full=Peptidase M23 family; | chromosome | CDS | 4385863 | 900 | - | 0.466667 | |
SO4227 | conserved hypothetical protein TIGR00006 | RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; | chromosome | CDS | 4402796 | 942 | - | 0.474522 | |
SO4319 | HlyD family secretion protein | chromosome | CDS | 4505665 | 1455 | + | 0.446048 | ||
SO4321 | OmpA family protein | SubName: Full=Pal-like T1SS-linked outer membrane lipoprotein; | chromosome | CDS | 4508558 | 606 | + | 0.448845 | |
SO4327 | HlyD family secretion domain protein | SubName: Full=RND-type multidrug/detergent efflux system MFP component VexB; | chromosome | CDS | 4518424 | 1119 | + | 0.462913 | |
SO4420 | peptidase, M23/M37 family | SubName: Full=Subfamily M23B unassigned peptidase; | chromosome | CDS | 4612038 | 513 | + | 0.45614 | |
SO4473 | outer membrane protein, putative | SubName: Full=Autotransporter; | chromosome | CDS | 4662161 | 567 | - | 0.416226 | |
SO4505 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4696908 | 657 | + | 0.487062 | |
SO4564 | TonB2 protein, putative | SubName: Full=TonB mediated energy transduction system energy transducer component TonB; | chromosome | CDS | 4760828 | 612 | + | 0.477124 | |
SO4597 | heavy metal efflux system protein, putative | chromosome | CDS | 4788361 | 1419 | + | 0.479211 | ||
SO4628 | sulfatase | SubName: Full=Membrane sulfatase HI1246 family; EC=3.1.6.-; | chromosome | CDS | 4822919 | 1983 | - | 0.480585 | |
SO4660 | transglycosylase SLT domain protein | SubName: Full=Glycoside hydrolase family 23; EC=4.2.2.-; | chromosome | CDS | 4859473 | 720 | - | 0.480556 | |
SO4678 | heptosyl transferase, glycosyltransferase family 9 protein | SubName: Full=ADP-heptose-LPS heptosyltransferase WaaC; EC=2.4.1.-; | chromosome | CDS | 4876548 | 1044 | + | 0.510536 | |
SO4679 | glycosyl transferase, group 1 family protein | SubName: Full=Glycosyl transferase family 4 WabH; EC=2.4.1.-; | chromosome | CDS | 4877644 | 1086 | + | 0.467772 | |
SO4680 | conserved hypothetical protein | SubName: Full=CDP-glycerol glycerophosphotransferase family protein; | chromosome | CDS | 4878749 | 1077 | + | 0.481894 | |
SO4681 | glycosyl transferase, group 1 family protein | SubName: Full=Glycosyl transferase family 4; EC=2.4.1.-; | chromosome | CDS | 4879861 | 1179 | - | 0.410517 | |
SO4682 | glycosyl transferase, group 1 family protein | SubName: Full=Glycosyl transferase family 4; EC=2.4.1.-; | chromosome | CDS | 4881325 | 1071 | - | 0.47619 | |
SO4686 | NAD dependent epimerase/dehydratase family protein | SubName: Full=UDP-glucuronate 4-epimerase WcvA; EC=5.1.3.6; | chromosome | CDS | 4885039 | 1008 | - | 0.489087 | |
SO4688 | glycosyl transferase, group 2 family protein | SubName: Full=Glycosyl transferase family 2; EC=2.4.1.-; | chromosome | CDS | 4887469 | 732 | + | 0.506831 | |
SO4690 | conserved hypothetical protein | SubName: Full=Glycosyl transferase family 83; | chromosome | CDS | 4889105 | 1725 | + | 0.496812 | |
SO4693 | multidrug resistance protein, AcrA/AcrE family | SubName: Full=Proton-coupled multidrug efflux pump MFP component VmeA; | chromosome | CDS | 4894620 | 1149 | - | 0.490862 | |
aggA | agglutination protein | SubName: Full=Type I protein secretion system secretin component AggA; | chromosome | CDS | 4507146 | 1416 | + | 0.457627 | |
alr | alanine racemase, biosynthetic | RecName: Full=Alanine racemase; EC=5.1.1.1; | chromosome | CDS | 4062285 | 1077 | - | 0.489322 | |
amiB | N-acetylmuramoyl-L-alanine amidase | SubName: Full=N-acetylmuramoyl-L-alanine amidase AmiB; EC=3.5.1.28; | chromosome | CDS | 625445 | 1392 | + | 0.454023 | |
asmA | asmA protein | SubName: Full=Outer membrane protein assembly protein AsmA; | chromosome | CDS | 2696117 | 1821 | - | 0.427238 | |
blc | lipoprotein Blc | SubName: Full=Lipocalin family lipoprotein Blc; | chromosome | CDS | 1778846 | 534 | - | 0.455056 | |
cfa | cyclopropane-fatty-acyl-phospholipid synthase | SubName: Full=Cyclopropane-fatty-acyl-phospholipid synthase CfaS; EC=2.1.1.79; | chromosome | CDS | 3517406 | 1257 | - | 0.463803 | |
cutE | apolipoprotein N-acyltransferase | RecName: Full=Apolipoprotein N-acyltransferase; Short=ALP N-acyltransferase; EC=2.3.1.-; | chromosome | CDS | 1219581 | 1557 | - | 0.487476 | |
dacA-1 | D-alanyl-D-alanine carboxypeptidase | chromosome | CDS | 1206370 | 1173 | - | 0.452685 | ||
dacB | penicillin-binding protein 4 | SubName: Full=D-alanyl-D-alanine carboxypeptidase DacB; EC=3.4.16.4; | chromosome | CDS | 2497388 | 1524 | + | 0.454724 | |
dapA | dihydrodipicolinate synthase | RecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; | chromosome | CDS | 1974639 | 885 | + | 0.483616 | |
ddlA | D-alanine--D-alanine ligase | RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; | chromosome | CDS | 2331687 | 1011 | - | 0.450049 | |
dgkA | diacylglycerol kinase | chromosome | CDS | 2317494 | 405 | - | 0.464198 | ||
flgJ | flagellar protein FlgJ | SubName: Full=Flagellar rod cap protein and peptidoglycan hydrolase FlgJ; EC=3.2.1.-; | chromosome | CDS | 3380959 | 1155 | - | 0.471861 | |
ftsI | peptidoglycan synthetase FtsI | SubName: Full=Peptidoglycan synthetase FtsI; EC=2.4.1.129; | chromosome | CDS | 4400705 | 1752 | - | 0.502283 | |
ftsQ | cell division protein FtsQ | RecName: Full=Cell division protein FtsQ; | chromosome | CDS | 4390781 | 789 | - | 0.468948 | |
galE | UDP-glucose 4-epimerase | SubName: Full=UDP-glucose 4-epimerase GalE; EC=5.1.3.2; | chromosome | CDS | 1751213 | 1014 | - | 0.472387 | |
galU | UTP-glucose-1-phosphate uridylyltransferase | SubName: Full=UTP-glucose-1-phosphate uridylyltransferase GalU; EC=2.7.7.9; | chromosome | CDS | 1752226 | 909 | - | 0.464246 | |
gidB | glucose-inhibited division protein B | RecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.170; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; | chromosome | CDS | 4967069 | 621 | - | 0.431562 | |
glmS | glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | RecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; | chromosome | CDS | 4951368 | 1830 | - | 0.497268 | |
glmU | UDP-N-acetylglucosamine pyrophosphorylase | RecName: Full=Bifunctional protein GlmU; Includes: RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.7.7.23; AltName: Full=N-acetylglucosamine-1-phosphate uridyltransferase; Includes: RecName: Full=Glucosamine-1-phosphate N-acetyltransferase; EC=2.3.1.157; | chromosome | CDS | 4956626 | 1365 | - | 0.477656 | |
htrB | lipid A biosynthesis lauroyl acyltransferase | SubName: Full=Lipid A biosynthesis lauroyl acyltransferase LpxL; EC=2.3.1.-; | chromosome | CDS | 3891551 | 927 | + | 0.487594 | |
imp | organic solvent tolerance protein | RecName: Full=LPS-assembly protein LptD; Flags: Precursor; | chromosome | CDS | 3793820 | 2298 | + | 0.449956 | |
kdsA | 2-dehydro-3-deoxyphosphooctonate aldolase | RecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; EC=2.5.1.55; AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthase; AltName: Full=KDO-8-phosphate synthase; Short=KDO 8-P synthase; Short=KDOPS; AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase; | chromosome | CDS | 3977374 | 849 | - | 0.444052 | |
kdsB | 3-deoxy-D-manno-octulosonatecytidylyltransferase | RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase; EC=2.7.7.38; AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid synthase; Short=CKS; Short=CMP-KDO synthase; | chromosome | CDS | 2599356 | 738 | + | 0.479675 | |
kdtA | 3-deoxy-D-manno-octulosonic-acid (KDO) transferase | SubName: Full=3-deoxy-D-manno-octulosonic-acid (KDO) transferase KdtA; EC=2.-.-.-; | chromosome | CDS | 4874417 | 1275 | + | 0.533333 | |
lepA | GTP-binding protein LepA | RecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; | chromosome | CDS | 1402038 | 1791 | + | 0.457286 | |
lgt | prolipoprotein diacylglyceryl transferase | RecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; | chromosome | CDS | 1392260 | 807 | + | 0.459727 | |
lolA | outer membrane lipoprotein carrier protein LolA | RecName: Full=Outer-membrane lipoprotein carrier protein; Flags: Precursor; | chromosome | CDS | 2419898 | 621 | + | 0.431562 | |
lolB | outer membrane lipoprotein LolB | RecName: Full=Outer-membrane lipoprotein LolB; Flags: Precursor; | chromosome | CDS | 3985011 | 645 | + | 0.494574 | |
lolE | lipoprotein releasing system transmembrane protein LolE | SubName: Full=ABC-type lipoprotein release system permease component LolE; | chromosome | CDS | 2372143 | 1233 | + | 0.501217 | |
lpxA | acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase | SubName: Full=Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase LpxA; EC=2.3.1.129; | chromosome | CDS | 1723502 | 771 | + | 0.486381 | |
lpxB | lipid A disaccharide synthase | RecName: Full=Lipid-A-disaccharide synthase; EC=2.4.1.182; | chromosome | CDS | 1724404 | 1158 | + | 0.489637 | |
lpxC | UDP-3-0-acyl N-acetylglucosamine deacetylase | RecName: Full=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; EC=3.5.1.-; AltName: Full=UDP-3-O-acyl-GlcNAc deacetylase; | chromosome | CDS | 4387250 | 921 | - | 0.465798 | |
lpxD | UDP-3-O-(3-hydroxymyristoyl) glucosamine n-acyltransferase | RecName: Full=UDP-3-O-acylglucosamine N-acyltransferase; EC=2.3.1.-; | chromosome | CDS | 1721984 | 1026 | + | 0.484405 | |
lpxK | tetraacyldisaccharide 4'-kinase | RecName: Full=Tetraacyldisaccharide 4-kinase; EC=2.7.1.130; AltName: Full=Lipid A 4-kinase; | chromosome | CDS | 2922559 | 1008 | - | 0.499008 | |
lspA | lipoprotein signal peptidase | RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; | chromosome | CDS | 3685286 | 513 | - | 0.409357 | |
lytB | penicillin tolerance protein LytB | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 3683909 | 957 | - | 0.45768 | |
mdoH | periplasmic glucans biosynthesis protein MdoH | RecName: Full=Glucans biosynthesis glucosyltransferase H; EC=2.4.1.-; | chromosome | CDS | 2205808 | 2184 | + | 0.491758 | |
mexE | RND multidrug efflux membrane fusion protein MexE | chromosome | CDS | 3643118 | 1431 | - | 0.480783 | ||
mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | SubName: Full=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase Mpl; EC=6.3.2.-; | chromosome | CDS | 3959211 | 1398 | - | 0.496423 | |
mraY | phospho-N-acetylmuramoyl-pentapeptide-transferase | RecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; | chromosome | CDS | 4396765 | 1083 | - | 0.476454 | |
mrcA | penicillin-binding protein 1A | SubName: Full=Penicillin-binding protein 1A McrA; EC=2.4.2.-; EC=3.4.-.-; | chromosome | CDS | 286053 | 2520 | - | 0.481349 | |
mrcB | penicillin-binding protein 1B | SubName: Full=Penicillin-binding protein 1B MrcB; EC=2.4.1.129; EC=3.4.-.-; | chromosome | CDS | 660661 | 2307 | + | 0.515388 | |
mrdA | penicillin-binding protein 2 | SubName: Full=Penicillin-binding protein 2 MrdA; | chromosome | CDS | 1210703 | 1857 | - | 0.480883 | |
mreC | rod shape-determining protein MreC | SubName: Full=Cell wall structural complex component MreC; | chromosome | CDS | 4255016 | 1068 | - | 0.514981 | |
mreD | rod shape-determining protein MreD | SubName: Full=Cell wall structural complex component MreD; | chromosome | CDS | 4254528 | 489 | - | 0.464213 | |
mscL | large conductance mechanosensitive channel protein | RecName: Full=Large-conductance mechanosensitive channel; | chromosome | CDS | 545546 | 411 | - | 0.46472 | |
mtgA | monofunctional biosynthetic peptidoglycan transglycosylase | RecName: Full=Monofunctional biosynthetic peptidoglycan transglycosylase; Short=Monofunctional TGase; EC=2.4.2.-; | chromosome | CDS | 3878719 | 777 | - | 0.456885 | |
mtrB | outer membrane protein precursor MtrB | SubName: Full=Extracellular iron oxide respiratory system outer membrane component MtrB; | chromosome | CDS | 1856169 | 2094 | - | 0.463228 | |
murA | UDP-N-acetylglucosamine1-carboxyvinyltransferase | RecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase; Short=EPT; | chromosome | CDS | 4093440 | 1260 | - | 0.504762 | |
murB | UDP-N-acetylenolpyruvoylglucosamine reductase | RecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; | chromosome | CDS | 223639 | 1026 | + | 0.446394 | |
murC | UDP-N-acetylmuramate--alanine ligase | RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; | chromosome | CDS | 4391681 | 1467 | - | 0.496933 | |
murD | UDP-N-acetylmuramoylalanine--D-glutamateligase | RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; | chromosome | CDS | 4395439 | 1320 | - | 0.506818 | |
murE | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase | chromosome | CDS | 4399230 | 1476 | - | 0.518293 | ||
murF | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase | RecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; | chromosome | CDS | 4397848 | 1383 | - | 0.491685 | |
murG | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase | RecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; | chromosome | CDS | 4393150 | 1089 | - | 0.517906 | |
murI | glutamate racemase | RecName: Full=Glutamate racemase; EC=5.1.1.3; | chromosome | CDS | 214813 | 822 | + | 0.457421 | |
nlpB | lipoprotein-34 NlpB | RecName: Full=Outer membrane protein assembly factor BamC; Flags: Precursor; | chromosome | CDS | 1975527 | 1098 | + | 0.454463 | |
nlpD | lipoprotein NlpD | SubName: Full=Lipoprotein NlpD; | chromosome | CDS | 3578320 | 897 | - | 0.410256 | |
ompH | outer membrane protein OmpH | SubName: Full=Periplasmic chaperone for outer membrane proteins Skp; | chromosome | CDS | 1721474 | 507 | + | 0.424063 | |
pal | peptidoglycan-associated lipoprotein | SubName: Full=Peptidoglycan-associated lipoprotein Pal; | chromosome | CDS | 2868611 | 534 | - | 0.449438 | |
pbpG | D-alanyl-D-alanine endopeptidase | SubName: Full=D-alanyl-D-alanine endopeptidase PbpG; EC=3.4.-.-; | chromosome | CDS | 1029978 | 966 | + | 0.459627 | |
rfaE | ADP-heptose synthase | RecName: Full=Bifunctional protein HldE; Includes: RecName: Full=D-beta-D-heptose 7-phosphate kinase; EC=2.7.1.167; AltName: Full=D-beta-D-heptose 7-phosphotransferase; AltName: Full=D-glycero-beta-D-manno-heptose-7-phosphate kinase; Includes: RecName: Full=D-beta-D-heptose 1-phosphate adenylyltransferase; EC=2.7.7.70; AltName: Full=D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase; | chromosome | CDS | 3890018 | 1431 | - | 0.502446 | |
rfbA | glucose-1-phosphate-thymidylyltransferase | RecName: Full=Glucose-1-phosphate thymidylyltransferase; EC=2.7.7.24; | chromosome | CDS | 3324543 | 915 | - | 0.382514 | |
rfbB | dTDP-glucose 4,6-dehydratase | SubName: Full=dTDP-glucose-4,6-dehydratase RfbB; EC=4.2.1.46; | chromosome | CDS | 3325912 | 1128 | - | 0.430851 | |
rfbC | dTDP-4-dehydrorhamnose 3,5-epimerase | SubName: Full=dTDP-4-keto-L-rhamnose-35-epimerase RfbC; EC=5.1.3.13; | chromosome | CDS | 3297547 | 540 | - | 0.472222 | |
rfbD | dTDP-4-dehydrorhamnose reductase | SubName: Full=dTDP-4-dehydrorhamnose reductase family; EC=1.1.1.133; | chromosome | CDS | 1741411 | 987 | + | 0.510638 | |
tolA | tolA protein | SubName: Full=TolA energy-transducing system inner membrane component TolA; | chromosome | CDS | 2870529 | 1038 | - | 0.468208 | |
tolC | outer membrane protein TolC | SubName: Full=Global secretion system secretin TolC; | chromosome | CDS | 4051556 | 1308 | + | 0.447248 | |
tonB1 | TonB1 protein | SubName: Full=TonB1 energy transduction system for heme uptake energy transducer component TonB; | chromosome | CDS | 3823865 | 825 | + | 0.473939 | |
tonB2 | TonB2 protein | SubName: Full=TonB2 mediated energy transduction system energy transducer component TonB2; | chromosome | CDS | 1920583 | 624 | + | 0.491987 | |
ugd | UDP-glucose 6-dehydrogenase | SubName: Full=UDP-glucose dehydrogenase WcvB; EC=1.1.1.22; | chromosome | CDS | 4886071 | 1164 | - | 0.456186 |