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2024-06-02 07:34:13

Gene list

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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome 2

Number of genes found: 65

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Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRB1861 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS2039906 1437 + 0.407098
NA PBPRB0334 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS383101 741 + 0.4278
NA PBPRB1342 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1496659 813 + 0.429274
NA PBPRB1758 hypothetical ABC-transporter outer membrane componentSubName: Full=Hypothetical ABC-transporter outer membrane component; chromosome 2 CDS1922779 1524 + 0.404856
NA PBPRB1678 Hypothetical periplasmic linker proteinSubName: Full=Hypothetical periplasmic linker protein; chromosome 2 CDS1822653 1086 - 0.429098
NA PBPRB0071 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS90507 930 - 0.4
NA PBPRB1595 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1745753 342 + 0.312865
NA PBPRB1532 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1681615 915 + 0.402186
NA PBPRB1639 hypothetical outer membrane proteinSubName: Full=Hypothetical outer membrane protein; chromosome 2 CDS1787124 1020 + 0.40098
NA PBPRB1300 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1442587 561 - 0.424242
NA PBPRB0265 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS303161 843 - 0.432977
NA PBPRB0927 putative D-alanine-D-alanine ligaseRecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; chromosome 2 CDS1068648 993 + 0.410876
NA PBPRB0064 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS81829 510 + 0.390196
NA PBPRB0266 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS304131 3000 - 0.436
NA PBPRB1086 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1231775 696 + 0.409483
NA PBPRB0916 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1056553 627 - 0.370016
NA PBPRB1756 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1919328 1338 + 0.395366
AGGA PBPRB0583 putative agglutination proteinSubName: Full=Putative agglutination protein; chromosome 2 CDS685192 1314 - 0.410198
AGR_C_45 PBPRB0873 putative multidrug efflux membrane fusion proteinSubName: Full=Putative multidrug efflux membrane fusion protein; chromosome 2 CDS1006424 1125 + 0.416
AGR_L_30 PBPRB0306 hypothetical glycosyltransferase, probably involved in cell wall biogenesisSubName: Full=Hypothetical glycosyltransferase, probably involved in cell wall biogenesis; chromosome 2 CDS346733 2232 - 0.43862
ALR PBPRB1952 putative alanine racemaseRecName: Full=Alanine racemase; EC=5.1.1.1; chromosome 2 CDS2150465 1218 + 0.407225
BB3850 PBPRB1024 putative transporter, BCCT familySubName: Full=Putative transporter, BCCT family; chromosome 2 CDS1167279 1605 - 0.418692
BRA0137 PBPRB0751 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS878765 1452 + 0.415289
BT3904 PBPRB0514 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS600825 978 + 0.462168
CT0995 PBPRB1536 Conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1686384 864 - 0.451389
ECS0919 PBPRB0791 putative D-alanyl-D-alanine carboxypeptidaseSubName: Full=Putative D-alanyl-D-alanine carboxypeptidase; chromosome 2 CDS922850 1185 - 0.413502
ECS4016 PBPRB0142 putative phosphosugar isomeraseSubName: Full=Putative phosphosugar isomerase; chromosome 2 CDS164506 1164 + 0.412371
GALE PBPRB0983 putative UDP-glucose 4-epimeraseSubName: Full=Putative UDP-glucose 4-epimerase; chromosome 2 CDS1122282 1017 - 0.437561
HD1253 PBPRB0246 putative diacylglycerol kinaseSubName: Full=Putative diacylglycerol kinase; chromosome 2 CDS282267 426 + 0.389671
HTRB PBPRB1986 putative lipid A biosynthesis lauroyl acyltransferaseSubName: Full=Putative lipid A biosynthesis lauroyl acyltransferase; chromosome 2 CDS2181740 930 - 0.426882
LIN2197 PBPRB1685 Hypothetical glycine betaine transporterSubName: Full=Hypothetical glycine betaine transporter; chromosome 2 CDS1830305 1488 - 0.519489
MRCB PBPRB0616 hypothetical membrane carboxypeptidaseSubName: Full=Hypothetical membrane carboxypeptidase; chromosome 2 CDS735560 2391 + 0.436219
PA4819 PBPRB0750 hypothetical glycosyl transferaseSubName: Full=Hypothetical glycosyl transferase; chromosome 2 CDS877611 1155 + 0.428571
PLU1297 PBPRB0070 putative penicillin-binding protein 2SubName: Full=Putative penicillin-binding protein 2; chromosome 2 CDS88149 2055 - 0.462774
PP1185 PBPRB1460 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1614503 510 - 0.411765
PSPTO229 PBPRB0582 putative outer membrane proteinSubName: Full=Putative outer membrane protein; chromosome 2 CDS684584 591 - 0.426396
PSPTO273 PBPRB0669 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS793837 321 - 0.404984
S1821 PBPRB1573 hypothetical cyclopropane-fatty-acyl-phospholipid synthase proteinSubName: Full=Hypothetical cyclopropane-fatty-acyl-phospholipid synthase protein; chromosome 2 CDS1723265 1029 + 0.424684
SCBAC28G PBPRB0201 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS221191 516 - 0.476744
SMC00430 PBPRB1065 hypothetical oxidoreductase proteinSubName: Full=Hypothetical oxidoreductase protein; chromosome 2 CDS1209016 582 - 0.431271
SO0428 PBPRB1267 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1411335 2229 - 0.435621
SO0428 PBPRB0002 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS2805 2283 + 0.422689
SO2194 PBPRB0759 hypothetical OmpA family proteinSubName: Full=Hypothetical OmpA family protein; chromosome 2 CDS888106 759 + 0.444005
SO4090 PBPRB0513 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS599422 1407 + 0.427861
STM1377 PBPRB0744 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome 2 CDS871921 264 - 0.412879
STY2450 PBPRB1494 putative lipoprotein NlpCSubName: Full=Putative lipoprotein NlpC; chromosome 2 CDS1649504 507 - 0.428008
TGFBI PBPRB1807 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1971863 957 - 0.515152
TONB2 OR PBPRB1217 putative TonB2 proteinSubName: Full=Putative TonB2 protein; chromosome 2 CDS1364123 684 - 0.457602
TONB2 OR PBPRB0698 hypothetical tonB2 proteinSubName: Full=Hypothetical tonB2 protein; chromosome 2 CDS817002 672 + 0.458333
VC2213 PBPRB0642 hypothetical outer membrane protein OmpASubName: Full=Hypothetical outer membrane protein OmpA; chromosome 2 CDS765310 975 + 0.441026
VP0166 PBPRB0695 putative biopolymer transport proteinExbB-related proteinSubName: Full=Putative biopolymer transport proteinExbB-related protein; chromosome 2 CDS814701 1368 + 0.428363
VP0557 PBPRB0441 hypothetical glycosylaseSubName: Full=Hypothetical glycosylase; chromosome 2 CDS513060 1443 - 0.349272
VP1176 PBPRB1679 Hypothetical multidrug resistance proteinSubName: Full=Hypothetical multidrug resistance protein; chromosome 2 CDS1823741 1068 - 0.420412
VPA0557 PBPRB1127 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1273809 753 - 0.415671
VPA0558 PBPRB1126 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1272486 1230 - 0.433333
VPA0559 PBPRB1125 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS1271264 1233 - 0.450933
VVA0333 PBPRB0584 putative secretion protein, HlyD familySubName: Full=Putative secretion protein, HlyD family; chromosome 2 CDS686511 1431 - 0.384347
VVA0543 PBPRB0333 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS382546 378 + 0.407407
VVA1499 PBPRB0371 putative outer membrane protein TolCSubName: Full=Putative outer membrane protein TolC; chromosome 2 CDS421279 1299 - 0.424172
VVA1500 PBPRB0372 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 2 CDS422570 1140 - 0.425439
XACB0036 PBPRB1621 hypothetical conjugal transfer proteinSubName: Full=Hypothetical conjugal transfer protein; chromosome 2 CDS1768486 528 + 0.481061
XCC1439 PBPRB1637 hypothetical RND multidrug efflux membrane fusion protein MexESubName: Full=Hypothetical RND multidrug efflux membrane fusion protein MexE; chromosome 2 CDS1782511 1143 + 0.410324
Y3110 PBPRB1923 hypothetical lipoproteinSubName: Full=Hypothetical lipoprotein; chromosome 2 CDS2116364 399 - 0.431078
YCDQ PBPRB0456 Putative glycosyl transferaseSubName: Full=Putative glycosyl transferase; chromosome 2 CDS529380 1263 - 0.411718
YPO0284 PBPRB1864 conserved hypothetical proSubName: Full=Uncharacterized protein; chromosome 2 CDS2044343 633 - 0.420221