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2024-06-15 15:31:23

Gene list

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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome

Number of genes found: 117

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Mycobacterium bovis AF2122/97, AF2122/97
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
Mb0144 Mb0144 PUTATIVE OXIDOREDUCTASE chromosome CDS166017 1023 + 0.674487
Mb0230 Mb0230 POSSIBLE CONSERVED PROTEIN chromosome CDS266987 1155 + 0.663203
Mb0496 Mb0496 MANNOSYLTRANSFERASE chromosome CDS576311 1443 + 0.70201
Mb0553 Mb0553 PROBABLE DOLICHYL-PHOSPHATE SUGAR SYNTHASE (DOLICHOL-PHOSPHATE SUGAR SYNTHETASE) (DOLICHOL-PHOSPHATE SUGAR TRANSFERASE) (SUGAR PHOSPHORYLDOLICHOL SYNT chromosome CDS632987 633 + 0.707741
Mb0589c Mb0589c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS668494 1143 - 0.650044
Mb0715 Mb0715 PROBABLE MEMBRANE SUGAR TRANSFERASE chromosome CDS797288 1413 + 0.663836
Mb0975c Mb0975c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS1061123 999 - 0.664665
Mb1136c Mb1136c PROBABLE CHOLESTEROL DEHYDROGENASE chromosome CDS1234215 1113 - 0.648697
Mb1145 Mb1145 POSSIBLE EXPORTED PROTEIN chromosome CDS1241558 699 + 0.62804
Mb1240 Mb1240 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS1353391 975 + 0.66359
Mb1244c Mb1244c PUTATIVE GLYCOSYL TRANSFERASE chromosome CDS1355745 1164 - 0.646048
Mb1249c Mb1249c PROBABLE TETRONASIN-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER chromosome CDS1361397 1647 - 0.698846
Mb1262c Mb1262c POSSIBLE MEMBRANE PROTEIN chromosome CDS1374206 1236 - 0.697411
Mb1299c Mb1299c HYPOTHETICAL PROTEIN chromosome CDS1415804 699 - 0.665236
Mb1513 Mb1513 HYPOTHETICAL INVASION PROTEIN chromosome CDS1663736 1419 + 0.67019
Mb1514 Mb1514 HYPOTHETICAL INVASION PROTEIN chromosome CDS1665165 726 + 0.672176
Mb1538 Mb1538 PROBABLE GLYCOSYLTRANSFERASE chromosome CDS1687596 1029 + 0.549077
Mb1542c Mb1542c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS1690741 1149 - 0.601393
Mb1545 Mb1545 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS1693657 960 + 0.632292
Mb1547 Mb1547 probable sugar transferase chromosome CDS1695041 1041 + 0.632085
Mb1593c Mb1593c Possible inv protein chromosome CDS1759294 693 - 0.686869
Mb1785c Mb1785c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS1973919 1185 - 0.654852
Mb1899 Mb1899 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS2107556 2100 + 0.668571
Mb2073c Mb2073c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS2275875 2565 - 0.673684
Mb2189c Mb2189c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS2408627 1191 - 0.651553
Mb2211c Mb2211c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS2429026 1158 - 0.683074
Mb2213c Mb2213c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS2431148 1158 - 0.664076
Mb2285c Mb2285c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS2512998 1509 - 0.680583
Mb2460c Mb2460c PROBABLE CONSERVED TRANSMEMBRANE PROTEIN chromosome CDS2697278 1446 - 0.633472
Mb2630 Mb2630 PROBABLE CONSERVED MEMBRANE PROTEIN chromosome CDS2894934 432 + 0.636574
Mb2643c Mb2643c PUTATIVE ACYLTRANSFERASE chromosome CDS2906469 951 - 0.680336
Mb2740c Mb2740c POSSIBLE CONSERVED TRANSMEMBRANE ALANINE AND GLYCINE RICH PROTEIN chromosome CDS2989156 2100 - 0.652381
Mb2889c Mb2889c POSSIBLE PENICILLIN-BINDING LIPOPROTEIN chromosome CDS3131970 1812 - 0.666667
Mb2894c Mb2894c PROBABLE CONSERVED TRANSMEMBRANE PROTEIN chromosome CDS3137064 1215 - 0.646914
Mb2915 Mb2915 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS3156782 750 + 0.716
Mb2981 Mb2981 POSSIBLE GLYCOSYL TRANSFERASE chromosome CDS3266158 828 + 0.600242
Mb3058 Mb3058 POSSIBLE TRANSFERASE chromosome CDS3348094 1245 + 0.680321
Mb3131c Mb3131c POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN chromosome CDS3428399 927 - 0.659115
Mb3389 Mb3389 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS3722637 390 + 0.676923
Mb3436c Mb3436c CONSERVED HYPOTHETICAL PROTEIN [FIRST PART] chromosome CDS3773467 1053 - 0.646724
Mb3651c Mb3651c CONSERVED HYPOTHETICAL PROTEIN chromosome CDS4003137 1386 - 0.683261
Mb3655 Mb3655 PUTATIVE TRANSFERASE (POSSIBLY GLYCOSYLTRANSFERASE) chromosome CDS4007751 726 + 0.630854
Mb3739 Mb3739 POSSIBLE LIGASE chromosome CDS4094441 1242 + 0.704509
Mb3744 Mb3744 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS4098508 726 + 0.663912
Mb3747 Mb3747 POSSIBLE FATTY ACID SYNTHASE chromosome CDS4101196 1263 + 0.637371
Mb3752 Mb3752 PUTATIVE OXIDOREDUCTASE chromosome CDS4107673 1002 + 0.642715
Mb3815c Mb3815c HYPOTHETICAL PROTEIN chromosome CDS4168669 1224 - 0.653595
Mb3841 Mb3841 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS4211071 1620 + 0.660494
Mb3880 Mb3880 CONSERVED HYPOTHETICAL PROTEIN chromosome CDS4260288 657 + 0.684932
Mb3946 Mb3946 PUTATIVE HYDROLASE chromosome CDS4337152 1221 + 0.627355
alr Mb3457c PROBABLE ALANINE RACEMASE ALR chromosome CDS3792822 1227 - 0.660147
betP Mb0941 POSSIBLE GLYCINE BETAINE TRANSPORT INTEGRAL MEMBRANE PROTEIN BETP chromosome CDS1022553 1782 + 0.6156
cmaA1 Mb3424c CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 1 CMAA1 (CYCLOPROPANE FATTY ACID SYNTHASE) (CFA SYNTHASE) (CYCLOPROPANE MYCOLIC ACID SYNTHASE 1) chromosome CDS3759911 864 - 0.603009
cmaA2 Mb0515c CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 2 CMAA2 (CYCLOPROPANE FATTY ACID SYNTHASE) (CFA SYNTHASE) (CYCLOPROPANE MYCOLIC ACID SYNTHASE 2) (MYCOLI chromosome CDS595022 909 - 0.605061
dacB1 Mb3363 PROBABLE PENICILLIN-BINDING PROTEIN DACB1 (D-ALANYL-D-ALANINE CARBOXYPEPTIDASE) (DD-PEPTIDASE) (DD-CARBOXYPEPTIDASE) (PBP) (DD-TRANSPEPTIDASE) (SERINE chromosome CDS3673026 1218 + 0.70197
dacB2 Mb2935 PROBABLE D-ALANYL-D-ALANINE CARBOXYPEPTIDASE DACB2 (PENICILLIN-BINDING PROTEIN) (DD-PEPTIDASE) (DD-CARBOXYPEPTIDASE) (PBP) (DD-TRANSPEPTIDASE) (SERINE chromosome CDS3174855 876 + 0.690639
dapA Mb2774c PROBABLE DIHYDRODIPICOLINATE SYNTHASE DAPA (DHDPS) (DIHYDRODIPICOLINATE SYNTHETASE) chromosome CDS3022796 903 - 0.6866
ddlA Mb3005c PROBABLE D-ALANINE--D-ALANINE LIGASE DDLA (D-ALANYLALANINE SYNTHETASE) (D-ALA-D-ALA LIGASE) chromosome CDS3293365 1113 - 0.674753
ftsQ Mb2175c POSSIBLE CELL DIVISION PROTEIN FTSQ chromosome CDS2390211 945 - 0.681481
galE1 Mb3658c UDP-GLUCOSE 4-EPIMERASE GALE1 (GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHATE GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHO-GALACTOSE chromosome CDS4009904 945 - 0.648677
galE2 Mb0513 POSSIBLE UDP-GLUCOSE 4-EPIMERASE GALE2 (GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHATE GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHO-G chromosome CDS592805 1131 + 0.633952
galE3 Mb0550 PROBABLE UDP-GLUCOSE 4-EPIMERASE GALE3 (GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHATE GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHO-G chromosome CDS628492 1041 + 0.70317
galU Mb1020 PROBABLE UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE GALU (UDP-GLUCOSE PYROPHOSPHORYLASE) (UDPGP) (ALPHA-D-GLUCOSYL-1-PHOSPHATE URIDYLYLTRANSFERASE) chromosome CDS1109723 921 + 0.662324
gca Mb0116 POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA (GDP-D-MANNOSE DEHYDRATASE) chromosome CDS136327 957 + 0.557994
gid Mb3950c PROBABLE GLUCOSE-INHIBITED DIVISION PROTEIN B GID chromosome CDS4341488 675 - 0.662222
glf Mb3839c UDP-GALACTOPYRANOSE MUTASE GLF (UDP-GALP MUTASE) (NAD+-FLAVIN ADENINE DINUCLEOTIDE-REQUIRING ENZYME) chromosome CDS4208549 1200 - 0.624167
glmS Mb3466c PROBABLE GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] GLMS (HEXOSEPHOSPHATE AMINOTRANSFERASE) (D-FRUCTOSE-6-PHOSPHATE AMIDOTRANSFE chromosome CDS3802717 1875 - 0.6672
glmU Mb1046c Probable UDP-N-acetylglucosamine pyrophosphorylase glmU chromosome CDS1137020 1488 - 0.675403
lepA Mb2427c PROBABLE GTP-BINDING PROTEIN LEPA (GTP-BINDING ELONGATION FACTOR) chromosome CDS2669356 1962 - 0.638634
lgt Mb1640 Possible prolipoprotein diacylglyceryl transferases Lgt chromosome CDS1798537 1407 + 0.644634
lpqR Mb0861 PROBABLE CONSERVED LIPOPROTEIN LPQR chromosome CDS935469 777 + 0.683398
lpqU Mb1050 PUTATIVE CONSERVED LIPOPROTEIN LPQU chromosome CDS1144183 732 + 0.67623
lpqZ Mb1276 PUTATIVE LIPOPROTEIN LPQZ chromosome CDS1388101 861 + 0.699187
lspA Mb1566 Probable lipoprotein signal peptidase lspA chromosome CDS1726257 609 + 0.64532
lytB1 Mb3414c PROBABLE LYTB-RELATED PROTEIN LYTB1 chromosome CDS3748731 990 - 0.628283
lytB2 Mb1140 PROBABLE LYTB-RELATED PROTEIN LYTB2 chromosome CDS1237556 1008 + 0.65873
manC Mb3292c PROBABLE MANNOSE-1-PHOSPHATE GUANYLTRANSFERASE MANC (GDP-MANNOSE PYROPHOSPHORYLASE) (GDP-MANNOSE PHOSPHORYLASE) chromosome CDS3599498 1080 - 0.652778
menC Mb0568 PROBABLE MUCONATE CYCLOISOMERASE MENC (CIS,CIS-MUCONATE LACTONIZING ENZYME) (MLE) chromosome CDS645733 981 + 0.702345
mmaA1 Mb0664c METHOXY MYCOLIC ACID SYNTHASE 1 MMAA1 (METHYL MYCOLIC ACID SYNTHASE 1) (MMA1) (HYDROXY MYCOLIC ACID SYNTHASE) chromosome CDS740563 861 - 0.599303
mmaA2 Mb0663c METHOXY MYCOLIC ACID SYNTHASE 2 MMAA2 (METHYL MYCOLIC ACID SYNTHASE 2) (MMA2) (HYDROXY MYCOLIC ACID SYNTHASE) chromosome CDS739533 864 - 0.626157
mmaA3 Mb0662c METHOXY MYCOLIC ACID SYNTHASE 3 MMAA3 (METHYL MYCOLIC ACID SYNTHASE 3) (MMA3) (HYDROXY MYCOLIC ACID SYNTHASE) chromosome CDS738504 882 - 0.591837
mmaA4 Mb0661c METHOXY MYCOLIC ACID SYNTHASE 4 MMAA4 (METHYL MYCOLIC ACID SYNTHASE 4) (MMA4) (HYDROXY MYCOLIC ACID SYNTHASE) chromosome CDS737534 906 - 0.599338
mpb70 Mb2900 MAJOR SECRETED IMMUNOGENIC PROTEIN MPB70 PRECURSOR chromosome CDS3143546 582 + 0.642612
mpb83 Mb2898 CELL SURFACE LIPOPROTEIN MPB83 (LIPOPROTEIN P23) chromosome CDS3140421 663 + 0.634992
mscL Mb1011c POSSIBLE LARGE-CONDUCTANCE ION MECHANOSENSITIVE CHANNEL MSCL chromosome CDS1101476 456 - 0.600877
murA Mb1348 PROBABLE UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE MURA chromosome CDS1468357 1257 + 0.645983
murB Mb0492 PROBABLE UDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE REDUCTASE MURB (UDP-N-ACETYLMURAMATE DEHYDROGENASE) chromosome CDS571502 1110 + 0.663063
murC Mb2176c UDP-N-acetylmuramate-alanine ligase MurC chromosome CDS2391152 1485 - 0.676094
murD Mb2179c UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD chromosome CDS2395448 1461 - 0.704312
murE Mb2182c ProbableUDP-N-acetylmuramoylalanyl-D-glutamate- 2,6-diaminopimelate ligase MurE chromosome CDS2399515 1608 - 0.731343
murF Mb2181c UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamino pimelate-D-alanyl-D-alanyl ligase MurF chromosome CDS2397986 1533 - 0.71559
murG Mb2177c UPD-N-acetylglucosamine-N-acetylmuramyl- (pentapep tide) pyrophosphoryl-undecaprenol-N-acetylglucosamine transferase MurG chromosome CDS2392633 1233 - 0.74047
murI Mb1373 PROBABLE GLUTAMATE RACEMASE MURI chromosome CDS1503110 816 + 0.661765
murX Mb2180c phospho-N-acetylmuramoyl-pentappeptidetransferaseMurX chromosome CDS2396910 1080 - 0.65463
ompA Mb0923 PROBABLE OUTER MEMBRANE PROTEIN A OMPA chromosome CDS1003277 981 + 0.607543
pbpA Mb0016c PROBABLE PENICILLIN-BINDING PROTEIN PBPA chromosome CDS18758 1476 - 0.644986
pbpB Mb2187c Probable penicillin-binding membrane protein pbpB chromosome CDS2405440 2040 - 0.659314
pcaA Mb0479c MYCOLIC ACID SYNTHASE PCAA (CYCLOPROPANE SYNTHASE) chromosome CDS561867 864 - 0.603009
pimA Mb2642c ALPHA-MANNOSYLTRANSFERASE PIMA chromosome CDS2905322 1137 - 0.662269
pimB Mb0572 MANNOSYLTRANSFERASE PIMB chromosome CDS649779 1137 + 0.669305
plcD Mb1784c PROBABLE PHOSPHOLIPASE C 4 PLCD chromosome CDS1972246 1545 - 0.603884
ponA1 Mb0051 PROBABLE BIFUNCTIONAL PENICILLIN-BINDING PROTEIN 1A/1B PONA1 (MUREIN POLYMERASE) (PBP1): PENICILLIN-INSENSITIVE TRANSGLYCOSYLASE (PEPTIDOGLYCAN TGASE) chromosome CDS53647 2043 + 0.633382
ponA2 Mb3707 PROBABLE BIFUNCTIONAL MEMBRANE-ASSOCIATED PENICILLIN-BINDING PROTEIN 1A/1B PONA2 (MUREIN POLYMERASE) [INCLUDES: PENICILLIN-INSENSITIVE TRANSGLYCOSYLAS chromosome CDS4059263 2433 + 0.653103
ppm1 Mb2077c Polyprenol-monophosphomannose synthase Ppm1 chromosome CDS2292044 2625 - 0.670095
proX Mb3785c POSSIBLE OSMOPROTECTANT (GLYCINE BETAINE/CARNITINE/CHOLINE/L-PROLINE) BINDING LIPOPROTEIN PROX chromosome CDS4140720 948 - 0.625527
rfbB Mb3813 POSSIBLE DTDP-GLUCOSE 4,6-DEHYDRATASE RFBB chromosome CDS4166551 981 + 0.588175
rfbD Mb3812 PROBABLE O-ANTIGEN/LIPOPOLYSACCHARIDE TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER RFBD chromosome CDS4165553 843 + 0.626335
rfbE Mb3810 PROBABLE O-ANTIGEN/LIPOPOLYSACCHARIDE TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER RFBE chromosome CDS4163824 822 + 0.614355
rfe Mb1334 PUTATIVE UNDECAPAPRENYL-PHOSPHATE ALPHA-N-ACETYLGLUCOSAMINYLTRANSFERASE RFE chromosome CDS1456344 1215 + 0.651852
rmlA Mb0341 PROBABLE GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE RMLA (DTDP-GLUCOSE SYNTHASE) (DTDP-GLUCOSE PYROPHOSPHORYLASE) chromosome CDS399688 867 + 0.61361
rmlB1 Mb3493 PROBABLE DTDP-GLUCOSE 4,6-DEHYDRATASE RMLB1 chromosome CDS3829533 996 + 0.635542
rmlB2 Mb3497c POSSIBLE DTDP-GLUCOSE 4,6-DEHYDRATASE RMLB2 chromosome CDS3832671 1095 - 0.661187
rmlC Mb3494 PROBABLE DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE RMLC (DTDP-4-KETO-6-DEOXYGLUCOSE 3,5-EPIMERASE) (DTDP-L-RHAMNOSE SYNTHETASE) (THYMIDINE DIPHOSPHO-4-KETO chromosome CDS3830530 609 + 0.627258
rmlD Mb3294c POSSIBLE DTDP-RHAMNOSE MODIFICATION PROTEIN RMLD chromosome CDS3601483 915 - 0.691803
udgA Mb0330 PROBABLE UDP-GLUCOSE 6-DEHYDROGENASE UDGA (UDP-GLC DEHYDROGENASE) (UDP-GLCDH) (UDPGDH) chromosome CDS390290 1332 + 0.649399
ufaA1 Mb0455c PUTATIVE CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE UFAA1 (CYCLOPROPANE FATTY ACID SYNTHASE) (CFA SYNTHASE) chromosome CDS536243 1284 - 0.658879
umaA1 Mb0478 POSSIBLE MYCOLIC ACID SYNTHASE UMAA1 chromosome CDS560907 861 + 0.528455