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2024-06-02 01:21:54

Gene list

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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome

Number of genes found: 44

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Tropheryma whipplei TW08/27, TW08/27
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA TW197 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS235965 750 - 0.482667
NA TW317 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS350217 696 - 0.409483
NA TW039 putative ABC transport integral membrane subunitSubName: Full=Putative ABC transport integral membrane subunit; chromosome CDS35160 882 - 0.437642
NA TW264 conserved hypothetical protein (possible murein ligase)SubName: Full=Putative uncharacterized protein; chromosome CDS297309 1386 + 0.458874
NA TW040 putative glycosyl transferaseSubName: Full=Putative glycosyl transferase; chromosome CDS36116 972 + 0.459877
NA TW807 putative glycosyltransferaseSubName: Full=Putative glycosyltransferase; chromosome CDS914410 1218 + 0.472906
NA TW033 putative dehydrataseRecName: Full=dTDP-glucose 4,6-dehydratase; EC=4.2.1.46; chromosome CDS30664 984 - 0.456301
NA TW771 putative cytochrome biogenesis proteinSubName: Full=Putative cytochrome biogenesis protein; chromosome CDS868063 972 + 0.442387
NA TW584 putative peptidoglycan synthesis proteinRecName: Full=Bifunctional protein GlmU; Includes: RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.7.7.23; AltName: Full=N-acetylglucosamine-1-phosphate uridyltransferase; Includes: RecName: Full=Glucosamine-1-phosphate N-acetyltransferase; EC=2.3.1.157; chromosome CDS655551 1836 + 0.441176
NA TW777 putative glycosyl transferaseSubName: Full=Putative glycosyl transferase; chromosome CDS881548 804 - 0.486318
NA TW035 putative epimeraseSubName: Full=Putative epimerase; chromosome CDS31892 624 + 0.501603
NA TW751 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS847917 1203 + 0.444722
NA TW414 putative sugar-1-phosphate nucleotidyltransferaseSubName: Full=Putative sugar-1-phosphate nucleotidyltransferase; chromosome CDS451660 1095 - 0.476712
NA TW444 putative carboxypeptidaseSubName: Full=Putative carboxypeptidase; chromosome CDS484012 942 + 0.406582
NA TW336 putative glycosyl transferaseSubName: Full=Putative glycosyl transferase; chromosome CDS368207 1101 + 0.425068
NA TW038 putative ABC transport ATP-binding subunitSubName: Full=Putative ABC transport ATP-binding subunit; chromosome CDS34302 807 - 0.422553
NA TW787 putative penicillin-binding proteinSubName: Full=Putative penicillin-binding protein; chromosome CDS891053 1458 + 0.465021
NA TW036 putative nucleotidyl transferaseRecName: Full=Glucose-1-phosphate thymidylyltransferase; EC=2.7.7.24; chromosome CDS32571 879 + 0.450512
NA TW098 putative metalloproteaseSubName: Full=Putative metalloprotease; chromosome CDS97781 1125 + 0.439111
NA TW463 probable prolipoprotein diacylglyceryl transferase.RecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; chromosome CDS499790 819 - 0.422466
NA TW032 putative polysaccharide biosynthesis proteinSubName: Full=Putative polysaccharide biosynthesis protein; chromosome CDS29804 864 - 0.488426
NA TW042 putative glycosyl transferaseSubName: Full=Putative glycosyl transferase; chromosome CDS37548 729 - 0.484225
NA TW622 putative NLP/P60 family secreted proteinSubName: Full=Putative NLP/P60 family secreted protein; chromosome CDS707270 1233 - 0.500405
NA TW460 putative glycosyltransferaseSubName: Full=Putative glycosyltransferase; chromosome CDS496780 1176 - 0.470238
NA TW483 NLP/P60-family proteinSubName: Full=NLP/P60-family protein; chromosome CDS520865 894 - 0.525727
alr1 TW266 alanine racemase IRecName: Full=Alanine racemase; EC=5.1.1.1; chromosome CDS299448 1161 - 0.459087
alr2 TW267 alanine racemase IISubName: Full=Alanine racemase II; EC=5.1.1.1; chromosome CDS300658 663 - 0.464555
ddlA TW257 D-alanine--D-alanine ligase ARecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; chromosome CDS286979 1044 + 0.439655
ftsQ TW540 cell division proteinSubName: Full=Cell division protein; chromosome CDS574920 750 - 0.450667
glmS TW158 glucosamine--fructose-6-phosphate aminotransferase [isomerizing]RecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; chromosome CDS184178 1851 + 0.465694
ispH TW664 IspH proteinRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS755714 942 - 0.498938
lepA TW494 GTP-binding protein LepARecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; chromosome CDS531458 1806 - 0.466777
lspA TW250 lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS277872 453 + 0.423841
mraW TW550 S-adenosyl-methyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; chromosome CDS587070 954 - 0.455975
mraY TW546 phospho-N-acetylmuramoyl-pentapeptide-transferaseRecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; chromosome CDS582278 1110 - 0.427027
mscL TW684 large-conductance mechanosensitive channelSubName: Full=Large-conductance mechanosensitive channel; chromosome CDS772508 612 + 0.46732
murA TW254 UDP-N-acetylglucosamine1-carboxyvinyltransferaseSubName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase; EC=2.5.1.7; chromosome CDS283980 1326 + 0.472851
murB TW734 UDP-N-acetylenolpyruvoylglucosamine reductaseRecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; chromosome CDS828402 1056 - 0.476326
murC TW541 UDP-N-acetylmuramate--alanine ligaseSubName: Full=UDP-N-acetylmuramate--alanine ligase; EC=6.3.2.8; chromosome CDS575696 1428 - 0.432773
murD TW544 UDP-N-acetylmuramoylalanine--D-glutamateligaseRecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; chromosome CDS579308 1443 - 0.451836
murE TW545 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diami nopimelate ligaseRecName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; EC=6.3.2.-; AltName: Full=UDP-MurNAc-tripeptide synthetase; chromosome CDS580752 1530 - 0.443791
murF TW547 probableUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-- D-alanyl-D-alanyl ligaseRecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; chromosome CDS583384 1395 - 0.433692
murG TW542 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentape ptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseRecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; chromosome CDS577126 1071 - 0.478058
pbp TW548 penicillin-binding proteinSubName: Full=Penicillin-binding protein; chromosome CDS584800 1746 - 0.451317