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Gene list

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COG category: Replication, recombination and repair
Genomic element: pDTG1

Number of genes found: 10

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# Pseudomonas putida, NCIB 9816-4

>gid:1156384    putative ligase fragment
GTGCAGCTGCTGGCCAACGCTTGCCGGATGCAGCTGGAGGGAATCGTGGA
GAAGCGTGATGGCCGCCGCTACAGCAGCGCAAGGAACGGCGCTTGGGTGA
AATTGAAATGCGATAATCGCCAAGAATTTGTGATCTCAGGATTCACGCGC
GCAGCTACCGGCGTCGGTTCGCTGTTACTGCGGGCTCCCCTTTACGAACT
GATTACGGCCTTGCTGGCGCAGACGGCGTGGAATAATTGGTCGAAATCAG
CGATCAAGGTTCCCCTTTCAATGAATGCTCTGTCGAAAGGCCTACTCGGG
TTGGGAGCTATGCCCCTCACGCTGCTGGGCTCATTTGCTGTGTTTCCGGT
TTTCAATGCGCCCAGCCAGGGAAACTGGATAGTCGCCGGCACCGTCGCTG
CTGCTGGCGCTCTCGGGGCCTGGTTTATTGAGTGGACGGAGCGGAAAGTG
GTGGCAATCGCGTCGTCATCGACCTGA
>gid:1156409    putative transposase
GTGTATATGACTAATAGAAACGATAAGGGTGGGGAGCTTTTGGGTCAGGA
GCGGCGTCGCCGCTGGAGCCCGGAGCAAAAACTGGCCATGGTTCGCGAGA
GCCTGCAACCGGGGCAAAGCGTCTCGGTGGTGGCTCGACAGAATGGCGTG
AATGCCAACCAGTTGTTTCAGTGGCGCAAGCTCTATCAGAGCGGCAGTCT
CTCGGCTGTCAGTGCTGGGGAGAGCGTGGTGCCCGCTTCCGAGCTGGCCG
ATGCGCTCAAGCAGATCCGCGAGCTACAGCGCATGCTTGGCAAGAAAACC
ATGCAGGTCGAGATCCTTCAGGAAGCTGTGGAGATTGCTCGGTCGCGAAA
ATGGATTGCGCACTCACCCTTGTTGCCGGGGGACGACCAGTGA
>gid:1156408    putative transposase
ATGGATTGCGCACTCACCCTTGTTGCCGGGGGACGACCAGTGAAGCTGAT
CAGTGAAAGTCTCGGTGTAGCGCGCTCGCAATTGACGGTTCGACTCAACC
CAAATGCTCAGGTCGAGCGGCGTCGCCCTGCACTGGACGATGCCGCACTG
GTCGAAGAAATTCAGGCTGAAGTGAGTGAACTGCCCAGCTACGGGTACCG
CCGTGTGTGGGGGTTGCTGCGTCGTCGGCGTGAAAAGCAGAGTCAGGCGC
CGATCAACGTCAAGCGGGTTTATCGCGTCATGCGCGATCATCAGTTGCTG
CTGGAGCGACGGATTAAACAACCGGGTGTGGCACGCCGTCACGAAGGCCG
AATTGCCGTGGCCACCAGCGATACCCGGTGGTGCTCGGACGGGTTTGAGT
TTCGCTGTGATGATAACGCCAAGCTGAGCGTGACCTTTGCCCTGGACTGC
TGCGACCGCGAAGCCATCGGTTGGGTGGCCAGCCCGACCGGGTACAGCGG
CGACGATATCCGTGATCTGATGCTGGAGGCGGTGGAAAAACGCTTCGGTG
AAGAGGCGCCTGCCACCCCGGTGCAATGGCTGAGCGACAATGGCTCGGCC
TACATCGCTGAACAGACACGCCAGTTTGCCCGACAGATCGGCTTGCAACC
GCTGACCACGCCGGTGCGTAGCCCGCAGAGCAACGGCATGGCCGAGAGCT
CTAGCTGA
>gid:1156382  intA  putative integrase
ATGAGCAAACTAACCCCTAAGTTCGTCAAGGATGTCGACCAGCCCGGCTC
CTACCAGGACGGCCGAGGGTTGATTCTTCGTGTATCAGCTACCCTGCGGA
AAAGCTGGGTCTTTCGCTATATGCTGGCGAAACAACGGCACGACCTTGCC
CTGGGGACATTCCCTGCTTTGAGCCTCAGAGACGCAAGACTGGAGGCTGA
CAAGTACCGACTCGATATCGCCCGTGGCGTCGATCCAGTCGCTGAGCGCG
TGAAGGCCAAAGCTGCCAAAGCCTCGCGAGCCACAACGAGCCACACATTT
CGGGCGTCGGCAGAAAGGTACATACGCACGCATTCGTCGAGCTGGTCCAA
GAGACACCACCAGCAATGGCAGAATTCCCTCACGAAGCATGTCTACCCTG
TCATAGGCGGATTTCGGATAGCCGAGGTCGACACGGACGATATCCTGGAT
GTGCTAACGCCGATCTGGAGCAAGATCCCCGTCACGGCGAACCGCGTCCG
GAATCGCATAGAGCTCGTGCTCGATGCAGCCAAGGCACTGAAGCTTCGGC
AAGGTGAAAACCCCGCACGGTGGCGTGGTCATCTCGACAAGCTCTTGCCC
AAGCAATCGCATACGGTAGTCCCCTTCCCGTCTCCGACACCTTCACGCAC
TGCCGAGCTGTTGGCCAGGCTCGATTCCCTGGATGGGGCAGCAGCTCGTG
CTGTTGAATTCGCAATTCTGACTGCGACCCGTAACCAAGAGGTAAGCGGG
GCCCAGTGGCCGGAAATAGATTGGGAGGAGAAAGTCTGGTACATCCCAGC
AGAACGCATGAAAGCGGGCAAGGCTCACCGGGTACCCCTTACGGAGCAAA
TGCTCGAGGTGCTACGGCAGCAGATCGGAAAGCATGACAAATGGATATTT
CTCAACTCCTGGCGAACAGGCCCTATTCCCGGCAATGCCATGGCAAGGGT
ACTCGATCAGCTCCAGGTCGATGGCGTCGTACCGCATGGGTTCAGATCTA
CTTTTCGGACGTGGGCCGCGGAAGAAACCGATCACCAGCGAGAGGTTTGC
GAAATGGCTCTCGCGCATACCCTCAACAGTAAGGTTGAAGCAGCTTATAA
CCGCGGCGACTTGCTGGATAAGCGTCGCGCCCTGATGAAGGATTGGGGAG
ACTTTCTTGTCGTTAACGCTCCCCAGGTGAACGGTGAAGTATCGGATCTG
GTTTCGGAGCTTGCCCCTGATGCTGGGTCAGATCTGGCCAAGGTTCAGCC
GGCCGCTTGA
>gid:1156373  res1  putative resolvase
ATGTTCGTGCGTGCTTATCTCCGAGCCTCCACCGAGGATCAGGACGCCAG
TCGCGCCCGTGATCAACTGGAAGAATTCGTTGCGAGCCACGGAAAGGTTA
TCGCTGCCAGTTACATGGAGAACATCAGCGGCACGCTAGCTGATCGGCCA
GAGCTTCAACGCCTTCTGAACGATGCGCGCCGGGGTGACATAATTCTGGT
TGAAGCTATTGACCGGCTGTCTCGTATGAATGACCAGGACTGGCGGGCAC
TGATAACCGCGATAGACAGCAGAGGTCTGCGAATCGTAGCCGTCGACCTT
CCGACTAGTTACCAGGGTCTCACATTGCCGTCTGGTGACGAGTTCACTGA
TCGAATGTTGGCCTCAATCAATTCAATGATGACGGATATGATGGCGGCAA
TCGCCCGGAAGGATTATCTGCAGCGTCGGCACCGGCAGTCGCAAGGCATC
ACCAAAGCAAAAGCTGCAGGTGTTTACAAAGGCAGACCGGCAGATCTGGC
GCTGCGTAAGCGTGTTAGTGAGCTTCTGGCCGCTGGCTTGGGTATCCGAG
CAATCGCCCGTCATGCCGTTTGTTCAACCACGACTGTAATGCGTATCCGA
GACGAACTGGTTGAAAGCTTATCCAGTTGA
>gid:1156380  ruvB1  putative ultraviolet light resistance protein B
ATGTCGGTAGATCTCTCCAACGACCCTATGCTCAATCAGGCTGATCAAGT
TCGTTCCCCTGACTTCATGGATGGGTTTAAGCAGAACTTCGCGGACTGCA
CCTCTACCGAAGTTTTTGAGAACGTGACGAAAAACGCCCATGTTGCCAAT
TACAAAACATGTGAGCGCGTCGTGGATCAAGGCGGAAACGTTGAGTTCCT
GCATGACTACAAGGTAGGTGTAATCGAATACGTTTCCGGGCAGCCAAACT
TTCAGTCGTGCGGACCAGGTTGCTTGTACATCTGGGTCGGCATGGTAGGG
GACAACTACTGGAGCGGGAACTGCAAAATCTATGAGGAGTACACCCGATT
CCGCGTGATAGCCAAGGACGCCATTATTTCAGCTACCGTCGACAGAGCTG
TTTTCGACGAATCCTTCGTACGCTTAGAGGACCAGCGCGAACCATTGGTG
GACGTGGGCCGAGCTATTCAGGCGCGCGTGCTGCAGTGGGTTGCGTTGCC
GGTCGGTGTGGGCATCGGCCACACCAAAACCCTCGCCAAGGCAGCACAAC
ATGCCTCGAAGATCTGGCGTGAGAAAACCGGTGGTGTTGTAGACCTGCGC
AAGCCGGAGGCTGTTGAGTGGTTGTTGCGCCGGATGCCTGTCGAAGAAGT
GTGGGGCATTGGCAGGCGTATGCGCGATAACCTGGCCGGTGAAGGCATTA
AAACAGCGTGGGAGCTATCCCACGCTGAGCCGCGAACAATGGGCCGCAAA
TACTCAGTGGTCTTGGAACGAACGATCAGGGAGCTTCGCGGCGAGTCCTG
CATCGACATGGAACAAAGCCCACCGGACACACAGACCATTTGCTCAAGCA
AGATGTTTGGTCAGCGCGTCCACACAATCGAGGGGCTTGGCCAGGCGTTG
GCCACCTATATCCACAAGGCCGCTGAGAAGCTGCGCAAGCAGCGATCTTT
GTGCGGTGGCCTGCGGATCGGCATACAGACCTCGTTCCATGGCGACGGTC
CGAAGTACGCCAATGCAGCCACGGTCATTCCCGACTACCCAACAGATGAC
GTGCGCGTGCTGACAAAGCACGCGCTGCGTGCGTTGGAAGGCATCTACAG
GCCGGGCTTTGCGTACAGCAAAGCTGAGGTCATGTTAATGGATCTGCGAA
AGCGTGGTGAGTACACGCAAGATCTGTTCACGCCGAGTCAACCGGCGCGC
ACTGACGCGCTCATGAGCGTTATGGACAAGATCAACAGACGGTGGGGACA
TGATTGCTTACGCACTGCAGCTGTTCCCCTGTCGCCGGACTGGGGCATGC
GTAGGGCTCTGCTGAGCCCTAGTTACATGACCAGTTGGGATCAGATGTGG
ACGGTGCAATGCTAG
>gid:1156426  ruvB2  putative ultraviolet light resistance protein B
ATGAACTTTGAACCCCGGCGACCTGTGTTCAGCCTGGTCGACGCGAACAA
GTTTTACTGCAGCTGCGAGCGCATTTTCCGGCCCGAGCTGAGGGGTAAAC
CAGTGGTGGTTCTTTCGAACTCGGATGGCTGCATCGTTGCTTGCACCAAT
GAGGCCAAGGAGCTTGGTTTGAAGATGGGAGATCCTTATTTCAAGATCCG
GGCATTTCTGGAGCGCAACGGTGTTGCAGCGTTCAGCAGCAATTACACGC
TCTACGGCGAGTTATCGCACAGGATGGCAATGGCTACAGCGTCCCTGGTC
AGTGCCGTGGAACAGTATTCAATTGATGATGCCCTGGGTTATGTCCTCTC
TCTGAACCTCTATCGACGGCAGCTCACCGTGGCACAACGGGCTTTGATCG
CTGCCGAGCTGTCCTCACTGCGCGGGAGTAGCACTATCACTGTTGACCTG
GAGAAGGCCGCCGGGCAGGAGCTGTGCCTTTGTTGTGGATGTAGCAAAGA
GGCTGGAGAATCGGGTGAAGGCAAAAATGCAGGCCCGTGA
>gid:1156431  ssb  putative truncated single strand binding protein
ATGGCCCGTGGCGTAAACAAAGTGATTCTAATAGGGACTTGCGGTCAGGA
TCCCGAGGTTCGTTACCTTCCCAACGGTAACGCCGTGACCAATTTGAGCT
TGGCCACCAGTGAGCAATGGACAGATAAGCAAACCGGGCAGAAGGTCGAA
AAAACCGAGCGGCACCGGGTATCCCTGTTCGGCAAGGTGGCCGAGATTGC
CGGCGAGTATCTGCGCAAAGGTTCACAGGTCTACATCGAAGGCAAGCTGC
AAACCCGCGAATGGGAGAAGGACGGTATCAAGCGTTACACGACAGAAATT
GTCGTAGACATGCAAGGCACCATGCAGCTGCTGGGGGGTAGACCGCAGAA
CCAGGACGGCACCAACCAGGCGCAGCAACAGCGGCGACCACAACAACCGG
CCCCGCAACCGCAGCCCGCATATGACCCCATGGATGACGACATTCCCTTC
ATGGACCCCTATCGTTTTTCTTGCCTGCTGCAGTAG
>gid:1156420  tnpA  transposase
ATGAAGCAGATGACCTTCGCTGACGCCGAGTACGCCGGTAAGCGCAAACA
AACCCGCAAAGAGTTGTTCCTGATCGAGATGGATCGGGTGGTGCCGTGGA
AGGGTTTGATTGCCTTGATCGAACCGCATTATCCCAAGGGTGAAGGCGGT
CGTCCGGCCTATCCGCTGATGGCGATGCTGCGCGTGCACCTGATGCAAAA
CTGGTTCGGTTACAGCGATCCAGCGATGGAAGAGGCGCTGTACGAGACCA
CCATCCTGCGCCAGTTCGCGGGGCTGAGCTTGGAGCGTATCCCCGATGAA
ACCACCATCCTCAACTTCCGTCGTTTGCTGGAGAAGCACGAACTAGCCGC
CGGCATCTTGGCTGTCATCAATGGCTATCTGGGCGACCGAGGGCTGTCGC
TGCGCCAAGGCACGATCGTCGATGCCACGCTGATCAATGCGCCGAGTTCG
ACCAAGAACAAGGACGGTAAGCGCGACCCGGAAATGCATCAGACCAAGAA
GGGTAACCAGTACTACTTCGGCATGAAGGCGCACATCGGTGTCGATGATG
AGTCGGGCTTGGTGCACAGCGTGGTGGGCACGGCGGCCAACGTGGCCGAT
GTCACCCAGGTCGATAAGCTGCTGCACGGCGATGAGAACATGGTCGGTGC
CGACGCGGGTTACACCGGCGTCGAGAAACGCCCTGAACATGAAGGCCGGG
AGGTCATCTGGCAGATCGCCGCCCGCCGTAGTACTTACAAGAAGCTTGAT
AAGCGCAGTGCTTTGTACAAAGCCGCGCGCAAGATTGAGAAGGCCAAGGC
TCAGGTACGAGCCAAGGTCGAGCATCCGTTCCGGGTGATCAAGCGCCAGT
TCGGTTATGTGAAGGTGCGCTTCCGTGGTCTGGCGAAGAACACGGCGCAA
CTGGTGACGCTGTTCGCGCTGTCGAACCTGTGGATGGCGCGCCGACATTT
ACTGGCGAATGCAGGAGAGGTGCGCCTGTAA
>gid:1156442  traC  putative TraC protein
ATGTTCAATGTTACCTCTATCAAGGGGAGCAACCAGTACGCTGCAGCTGG
CTACTACACAGCTGCAGACGACTACTACGCAAAAGAGTCCCCCGGCGAGT
GGCAGGGAATCGGCGCCGAGCTTTTAGGCCTGGATGGGCCAATCGACCAG
AAGGAGCTGGCCAAGCTTTTTGACGGCAAGCTTCCGAACGGCGAGCTGAT
GCCCAAGCCCGTCAACAAGGAAACAGGTCAAATAGTTAATCGTCGGATGG
GTTTGGATCTGACGTTCTCAGCTCCGAAATCTGTGTCTATGCAAGCCCTG
ATCGCCGGTGACAAGGACGTGGTAGCTGCGCACGACCGCGCAGTAACCAA
AGCGATGGAGCATGTCGAGAAACTGGCGCAGACCCGCCGAAAGGAACATG
GCAAGTCCATGCTCGAACGAACGGGCAACCTGATCATCGGTAAGTTTCGC
CATGAACTCAGCCGCGCCAAAGATCCTCAGTTGCACACCCACGCCGTAGT
CATGAACGCGACACGGCGTGCAGACGGTAAATGGCGAGCAATACACAACG
ACGATATTTTCAAGATCCAACCGCAGATCGACGCCATGTACAAGGGCGAG
CTGGCCAAGGAGCTGCGCGAGCTGGGCTATGAAATTCGGGTGTTGGACAA
AGACGGGAATTTCGAGCTGGCCCATATTTCGAGGGACCAGATCGAGGCGT
TTTCGAGCCGGTCCAAGGTGATCGAGGAAGCGTTGGCCAAGGACGGGAAA
ACACGAAGCAACGCCACGGCCTTGGAGAAACAAATTATTGCGATGGCCAC
CAGGCCACGCAAAGACGAGCGCGACCGTCATTTGGTCAAAGAATACTGGG
TCATCAAGGCGCGAGATCTAGGTATCGAGTTCGGCGGCCGCAGTCAGCTT
GATAACCGCGAGTACGGTAGGCGCTCAGAGAGCATCCATGCAGAACACAA
CCTGCCGGAAGGCATCACCGCTGGCCAAGCAGTGGTGCAATACGCCATAA
ACCACTTGACCGAACGTGAGCAGGTTGTCGGCGAGTCTGATCTGCGCACA
GCTGCGCTACGGCGCGCTGTTGGCTTGGCATCGCCATCCGAAGTCGACGA
TGAAATCAAGCGTCTGGTGAAACAGGGAACGCTTATCGAATCTCCACCAA
CCTACACGATGGCCACAGGTAAGGATGGGACGGCGCTGTCACCTGCTGGG
TGGCGCGCATTGCTGAAAGAACAAAAGGGCTGGACTGACAAGGAAGCCCA
GCAGTACGTCAAGATGGCGATCACCCGTGGCTCTTTGGTTGAAGCTGAAA
AACGGTACACCACTCAACGGGCGTTGAAACGAGAAAAGGCGATCCTCGCT
ATCGAGCGCAGCGGACGTGGCCTAGTCGCGCCGCTGTTGAGCAAGGAGCA
GGTAGCAAAAGCACTTGAGGGCTCAACACTATCTGCAGGCCAGTACCAGG
CCGTGGAAGTGATCGTCAGTACGAGCAACCGATTTGTTGGCATCCAGGGC
GACGCAGGAACCGGCAAAACTTACTCAGTTGATCGCGCTGTTAAGCTGAT
CGAGTCAGTCAACAACGCCATGACCGAGCGGACTACAACGACCGATGCGG
TTTTCCGTGTCGTTGCTTTGGCACCCTACGGCAACCAAGTAACCGCACTG
AAAAACGAAGGGTTGGACGCTCACACACTCGCCAGCTTTTTCCATACCAA
AGACAAGAAGCTGGACGAGCGGACAATCGTCGTACTCGATGAGGCAGGTG
TAGTCGGCGCACGCCAGATGGAGCATCTGATGCGAATCATCGAGCAGTCC
GGCGCCCGACTGGTCCAGCTGGGCGACACCAAACAAACGGAAGCTATCGA
GGCTGGCAAACCATTCGCCCAGTTGCAGCAGAACGGTATGCAAACTGCGC
GGATCAAGGAAATTCAGCGACAGAAGAACCAGGAACTAAAAATTGCTGTT
CAGCATGCGGCTGATGGCAACCCGGGAAAGTCACTTGAGCATGTCAATCA
TGTTGAAGAATTCCGGGAGCCTGGCCAACGGCACCAAGCCATCGTTCGTG
ACTACATGTCGTTGACGCCGGAAGAACGCAAAGAAGTATTGATCGTCGCC
GGTACGAACAAGGACCGCAAACAGATCAACGCAATGACAAGGGAGTCGCT
TGGCCTCGTAGGCAACGGGAAAGAGCTGCCGACGCTCAACCGCGTCGACA
CCACACAAGCCGAACGACGGTACGCTCCAAGCTACAAAAAGGGAATGATC
GTACAGCCCGAGAAGGATTACATAAGAACTGGCTTGTCCCGAGGGGAGCT
GTATACCGTTGACCAGGCCCTGCCCGGAAACGTGCTGGTGGTAAAAGACA
AGAACGGGAACCGCGTCGAGTTTAATCCTCGGAAGCTGACCAAGCTCAGC
GTGTACAACCTTGAGAAACCTGAATTTTCCGTTGGCGATCTGGTGCGGAT
CACCCGTAATGATCAGAAACTGGATCTCACCAACGGCGACCGAATGCGGG
TTGTTGGGAACGCCAATGGCGTCATCGAGCTGGCATCCCTCAAAGAGAAA
GACGGCACGCCAGAACGAGTAGTGGCCCTTCCAACTAACCGACCATTGCA
TCTAGAGCACGCCTATTCCGCTACCGTCCACAGCGCCCAAGGTCTTACAA
ATGATCGAGTGATGATCTCCATCAACACGAAAAGCCGGACAACCTCACAA
AACCTTTGGTACGTGGCCATCAGCCGGGCAAGACACGAAGCGCGCATCTA
TACCGACTCAATAGCCGGATTGCCTGCCGCCATTGCAAACCGATACGACA
AAACTACAGCCCTGTCATTGCAGCAGGCGCGAGAGCGTCAGCGTAACGAG
TCCATCAAGCCGCGCACGGTGTTGGACGGTAAGGCGCTGGAACGCAAACA
GCGTTCCGCTCTGGACGGACCGAGCGCAGGTAAATCAGGCGTGTAG