Gene list
Applied filters:
COG category: Replication, recombination and repair
Genomic element: chromosome 1
Number of genes found: 133
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Burkholderia sp. 383, 383 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Bcep18194_A3742 | DNA polymerase III, delta subunit | chromosome 1 | CDS | 632554 | 1095 | + | 0.707763 |
NA | Bcep18194_A5698 | Gram negative topoisomerase IV, subunit A | chromosome 1 | CDS | 2805121 | 2322 | - | 0.667528 |
NA | Bcep18194_A5464 | ATP-dependent helicase HrpA | chromosome 1 | CDS | 2543577 | 4209 | - | 0.695652 |
NA | Bcep18194_A4974 | transposase IS3/IS911 | chromosome 1 | CDS | 2003439 | 417 | + | 0.604317 |
NA | Bcep18194_A6507 | 3-methyladenine DNA glycosylase/8-oxoguanineDNA glycosylase | chromosome 1 | CDS | 3679660 | 960 | - | 0.711458 |
NA | Bcep18194_A6051 | NUDIX hydrolase | chromosome 1 | CDS | 3192316 | 495 | - | 0.676768 |
NA | Bcep18194_A5454 | Exodeoxyribonuclease III xth | chromosome 1 | CDS | 2531390 | 777 | + | 0.661519 |
NA | Bcep18194_A5146 | hypothetical protein | chromosome 1 | CDS | 2191988 | 624 | + | 0.684295 |
NA | Bcep18194_A5352 | Phage SPO1 DNA polymerase-related protein | chromosome 1 | CDS | 2412050 | 1011 | - | 0.701286 |
NA | Bcep18194_A5538 | Excinuclease ABC, B subunit | chromosome 1 | CDS | 2630802 | 2124 | - | 0.638418 |
NA | Bcep18194_A3999 | hypothetical protein | chromosome 1 | CDS | 926032 | 162 | + | 0.641975 |
NA | Bcep18194_A5891 | Tyrosine recombinase XerD | chromosome 1 | CDS | 3011564 | 951 | - | 0.6898 |
NA | Bcep18194_A3785 | NUDIX hydrolase | chromosome 1 | CDS | 681181 | 630 | - | 0.68254 |
NA | Bcep18194_A3247 | Histone-like DNA-binding protein | chromosome 1 | CDS | 79524 | 279 | - | 0.609319 |
NA | Bcep18194_A5642 | Phage integrase | chromosome 1 | CDS | 2739065 | 1212 | - | 0.59736 |
NA | Bcep18194_A5875 | Exodeoxyribonuclease VII | chromosome 1 | CDS | 2995856 | 1383 | - | 0.720897 |
NA | Bcep18194_A4987 | Phage integrase | chromosome 1 | CDS | 2015945 | 1119 | - | 0.576407 |
NA | Bcep18194_A3657 | NUDIX hydrolase | chromosome 1 | CDS | 544651 | 444 | + | 0.668919 |
NA | Bcep18194_A4153 | DNA gyrase, subunit A | chromosome 1 | CDS | 1086842 | 2604 | + | 0.637481 |
NA | Bcep18194_A4044 | Nucleoside diphosphate pyrophosphatase | chromosome 1 | CDS | 968980 | 600 | + | 0.68 |
NA | Bcep18194_A5488 | Deoxyribodipyrimidine photolyase | chromosome 1 | CDS | 2575114 | 1557 | - | 0.709056 |
NA | Bcep18194_A3831 | DNA repair protein RecN | chromosome 1 | CDS | 737711 | 1650 | - | 0.702424 |
NA | Bcep18194_A3796 | Site-specific recombinase-like | chromosome 1 | CDS | 690715 | 2124 | - | 0.69162 |
NA | Bcep18194_A5126 | RecR protein | chromosome 1 | CDS | 2169580 | 597 | - | 0.673367 |
NA | Bcep18194_A6157 | hypothetical protein | chromosome 1 | CDS | 3307053 | 1497 | - | 0.739479 |
NA | Bcep18194_A4653 | hypothetical protein | chromosome 1 | CDS | 1642647 | 411 | + | 0.618005 |
NA | Bcep18194_A4944 | hypothetical protein | chromosome 1 | CDS | 1966812 | 255 | - | 0.666667 |
NA | Bcep18194_A5669 | Endonuclease III/Nth | chromosome 1 | CDS | 2776768 | 645 | + | 0.648062 |
NA | Bcep18194_A4921 | 2OG-Fe(II) oxygenase | chromosome 1 | CDS | 1942448 | 651 | + | 0.583717 |
NA | Bcep18194_A4929 | Methylated-DNA--(protein)-cysteineS-methyltransf erase | chromosome 1 | CDS | 1948208 | 552 | + | 0.637681 |
NA | Bcep18194_A5796 | DNA polymerase III chi subunit, HolC | chromosome 1 | CDS | 2910019 | 417 | - | 0.690647 |
NA | Bcep18194_A6106 | Uracil-DNA glycosylase superfamily | chromosome 1 | CDS | 3248882 | 633 | - | 0.649289 |
NA | Bcep18194_A4927 | 2OG-Fe(II) oxygenase | chromosome 1 | CDS | 1947238 | 645 | + | 0.593798 |
NA | Bcep18194_A3774 | Holliday junction DNA helicase RuvB | chromosome 1 | CDS | 669106 | 1071 | - | 0.676004 |
NA | Bcep18194_A3963 | Holliday junction resolvase YqgF | chromosome 1 | CDS | 884974 | 450 | + | 0.677778 |
NA | Bcep18194_A5170 | DnaB helicase | chromosome 1 | CDS | 2217788 | 1383 | - | 0.643529 |
NA | Bcep18194_A5356 | DEAD/DEAH box helicase | chromosome 1 | CDS | 2415092 | 1551 | + | 0.698904 |
NA | Bcep18194_A3995 | transposase and inactivated derivatives-like | chromosome 1 | CDS | 922590 | 516 | - | 0.610465 |
NA | Bcep18194_A5833 | DNA repair protein RadC | chromosome 1 | CDS | 2947004 | 774 | + | 0.706718 |
NA | Bcep18194_A3441 | ATP-dependent DNA helicase RecQ | chromosome 1 | CDS | 315053 | 1848 | + | 0.675325 |
NA | Bcep18194_A5096 | Helicase c2 | chromosome 1 | CDS | 2135443 | 2247 | - | 0.682688 |
NA | Bcep18194_A3795 | putative RNA methylase | chromosome 1 | CDS | 689248 | 1302 | - | 0.71659 |
NA | Bcep18194_A3213 | Site-specific DNA-methyltransferase (adenine-specific) | chromosome 1 | CDS | 44862 | 2019 | - | 0.676077 |
NA | Bcep18194_A4986 | Phage integrase | chromosome 1 | CDS | 2014405 | 1584 | - | 0.589015 |
NA | Bcep18194_A3182 | chromosomal replication initiator protein, DnaA | chromosome 1 | CDS | 76 | 1578 | + | 0.653992 |
NA | Bcep18194_A5658 | DEAD/DEAH box helicase-like | chromosome 1 | CDS | 2760036 | 1584 | - | 0.688131 |
NA | Bcep18194_A6508 | transcriptional regulator, AraC family | chromosome 1 | CDS | 3680616 | 1092 | - | 0.696886 |
NA | Bcep18194_A4080 | AAA ATPase | chromosome 1 | CDS | 1008786 | 1311 | + | 0.667429 |
NA | Bcep18194_A4187 | NUDIX hydrolase | chromosome 1 | CDS | 1122052 | 687 | + | 0.656477 |
NA | Bcep18194_A4427 | Ribonuclease H | chromosome 1 | CDS | 1384168 | 444 | - | 0.650901 |
NA | Bcep18194_A5296 | DNA-directed DNA polymerase | chromosome 1 | CDS | 2349073 | 618 | + | 0.631068 |
NA | Bcep18194_A4983 | Phage integrase | chromosome 1 | CDS | 2009443 | 1767 | - | 0.701754 |
NA | Bcep18194_A6479 | SMF protein | chromosome 1 | CDS | 3646915 | 1347 | + | 0.731997 |
NA | Bcep18194_A6481 | DNA topoisomerase III | chromosome 1 | CDS | 3648872 | 2598 | + | 0.638953 |
NA | Bcep18194_A5422 | RecJ exonuclease | chromosome 1 | CDS | 2490949 | 1698 | + | 0.709658 |
NA | Bcep18194_A5120 | 3'-5' exonuclease related to the exonuclease domain of PolB | chromosome 1 | CDS | 2163643 | 777 | - | 0.634492 |
NA | Bcep18194_A4114 | DNA polymerase III, epsilon subunit | chromosome 1 | CDS | 1043196 | 1137 | + | 0.693052 |
NA | Bcep18194_A3776 | Crossover junction endodeoxyribonuclease RuvC | chromosome 1 | CDS | 671045 | 543 | - | 0.707182 |
NA | Bcep18194_A6109 | Excinuclease ABC, A subunit | chromosome 1 | CDS | 3251658 | 2886 | + | 0.661816 |
NA | Bcep18194_A5998 | DEAD/DEAH box helicase | chromosome 1 | CDS | 3131668 | 1455 | + | 0.687285 |
NA | Bcep18194_A6127 | A/G-specific adenine glycosylase MutY | chromosome 1 | CDS | 3270705 | 1107 | - | 0.719964 |
NA | Bcep18194_A5255 | transcription-repair coupling factor | chromosome 1 | CDS | 2307667 | 3471 | + | 0.679343 |
NA | Bcep18194_A3293 | Primosomal protein n | chromosome 1 | CDS | 128342 | 2262 | + | 0.72237 |
NA | Bcep18194_A6437 | Tyrosine recombinase XerC | chromosome 1 | CDS | 3602959 | 921 | + | 0.681868 |
NA | Bcep18194_A4673 | hypothetical protein | chromosome 1 | CDS | 1664058 | 918 | - | 0.64597 |
NA | Bcep18194_A4161 | Integration host factor, beta subunit | chromosome 1 | CDS | 1097491 | 324 | + | 0.604938 |
NA | Bcep18194_A3812 | ATP-dependent DNA helicase RecG | chromosome 1 | CDS | 708450 | 2334 | + | 0.704799 |
NA | Bcep18194_A4975 | IS66 Orf2 like | chromosome 1 | CDS | 2003843 | 354 | + | 0.644068 |
NA | Bcep18194_A4909 | hypothetical protein | chromosome 1 | CDS | 1927964 | 3843 | + | 0.557897 |
NA | Bcep18194_A4634 | hypothetical protein | chromosome 1 | CDS | 1615013 | 402 | - | 0.691542 |
NA | Bcep18194_A5979 | RecA DNA recombination protein | chromosome 1 | CDS | 3108905 | 1047 | - | 0.627507 |
NA | Bcep18194_A6112 | NUDIX hydrolase | chromosome 1 | CDS | 3256938 | 867 | - | 0.712803 |
NA | Bcep18194_A5684 | G-T/U mismatch-specific DNA glycosylase-like | chromosome 1 | CDS | 2789793 | 477 | - | 0.666667 |
NA | Bcep18194_A5699 | DNA topoisomerase (ATP-hydrolyzing) | chromosome 1 | CDS | 2807512 | 1983 | - | 0.657589 |
NA | Bcep18194_A5743 | Excinuclease ABC, C subunit-like | chromosome 1 | CDS | 2848286 | 870 | + | 0.670115 |
NA | Bcep18194_A3391 | protein of unknown function UPF0102 | chromosome 1 | CDS | 250423 | 387 | + | 0.741602 |
NA | Bcep18194_A3183 | DNA-directed DNA polymerase | chromosome 1 | CDS | 1822 | 1107 | + | 0.636856 |
NA | Bcep18194_A6456 | Exodeoxyribonuclease III xth | chromosome 1 | CDS | 3622008 | 774 | - | 0.620155 |
NA | Bcep18194_A5191 | TatD-related deoxyribonuclease | chromosome 1 | CDS | 2236682 | 780 | - | 0.647436 |
NA | Bcep18194_A6209 | Phage integrase | chromosome 1 | CDS | 3363425 | 912 | - | 0.552632 |
NA | Bcep18194_A4426 | DNA polymerase III, epsilon subunit | chromosome 1 | CDS | 1383395 | 735 | - | 0.668027 |
NA | Bcep18194_A6076 | hypothetical protein | chromosome 1 | CDS | 3218701 | 180 | - | 0.683333 |
NA | Bcep18194_A3775 | DNA recombination protein, RuvA | chromosome 1 | CDS | 670307 | 582 | - | 0.658076 |
NA | Bcep18194_A3329 | UvrD/REP helicase | chromosome 1 | CDS | 176781 | 2088 | + | 0.664751 |
NA | Bcep18194_A5729 | hypothetical protein | chromosome 1 | CDS | 2834983 | 549 | + | 0.655738 |
NA | Bcep18194_A4167 | DNA-binding protein | chromosome 1 | CDS | 1103123 | 342 | + | 0.681287 |
NA | Bcep18194_A5201 | putative exonuclease, RdgC | chromosome 1 | CDS | 2245219 | 948 | + | 0.623418 |
NA | Bcep18194_A6208 | hypothetical protein | chromosome 1 | CDS | 3361746 | 1683 | - | 0.526441 |
NA | Bcep18194_A3991 | transposase and inactivated derivatives-like | chromosome 1 | CDS | 919222 | 444 | + | 0.617117 |
NA | Bcep18194_A4925 | Methylated-DNA--(protein)-cysteineS-methyltransf erase | chromosome 1 | CDS | 1945956 | 561 | + | 0.597148 |
NA | Bcep18194_A4930 | DNA-3-methyladenine glycosylase II | chromosome 1 | CDS | 1948762 | 645 | + | 0.615504 |
NA | Bcep18194_A5448 | DNA-directed DNA polymerase | chromosome 1 | CDS | 2522910 | 1158 | - | 0.686529 |
NA | Bcep18194_A3853 | DNA mismatch repair protein | chromosome 1 | CDS | 759905 | 1986 | - | 0.697885 |
NA | Bcep18194_A4255 | Excinuclease ABC, C subunit | chromosome 1 | CDS | 1189707 | 2034 | + | 0.675025 |
NA | Bcep18194_A3347 | DNA-3-methyladenine glycosylase I | chromosome 1 | CDS | 204798 | 603 | - | 0.650083 |
NA | Bcep18194_A5128 | DNA-directed DNA polymerase | chromosome 1 | CDS | 2170627 | 2376 | - | 0.702441 |
NA | Bcep18194_A4248 | Recombination protein O, RecO | chromosome 1 | CDS | 1182752 | 837 | + | 0.661888 |
NA | Bcep18194_A3616 | Uracil-DNA glycosylase | chromosome 1 | CDS | 490813 | 906 | - | 0.710817 |
NA | Bcep18194_A4863 | hypothetical protein | chromosome 1 | CDS | 1881764 | 870 | + | 0.67931 |
NA | Bcep18194_A6105 | DNA-3-methyladenine glycosylase II | chromosome 1 | CDS | 3248272 | 624 | - | 0.725962 |
NA | Bcep18194_A5892 | Methylated-DNA-(protein)-cysteineS-methyltransfe rase | chromosome 1 | CDS | 3012514 | 504 | - | 0.670635 |
NA | Bcep18194_A4586 | UvrD/REP helicase | chromosome 1 | CDS | 1564393 | 2364 | + | 0.667513 |
NA | Bcep18194_A4621 | Integration host factor, alpha subunit | chromosome 1 | CDS | 1604402 | 396 | + | 0.631313 |
NA | Bcep18194_A4548 | NUDIX hydrolase | chromosome 1 | CDS | 1519688 | 471 | + | 0.670913 |
NA | Bcep18194_A6107 | Single-strand binding protein | chromosome 1 | CDS | 3249550 | 555 | - | 0.677477 |
NA | Bcep18194_A4061 | Superfamily I DNA and RNA helicases-like | chromosome 1 | CDS | 983380 | 3324 | - | 0.523767 |
NA | Bcep18194_A5315 | Ribonuclease H | chromosome 1 | CDS | 2367280 | 645 | - | 0.688372 |
NA | Bcep18194_A6128 | DNA-formamidopyrimidine glycosylase | chromosome 1 | CDS | 3271836 | 828 | - | 0.698068 |
NA | Bcep18194_A5703 | hypothetical protein | chromosome 1 | CDS | 2813118 | 204 | + | 0.583333 |
NA | Bcep18194_A3498 | protein of unknown function DUF1568 | chromosome 1 | CDS | 361938 | 714 | + | 0.672269 |
NA | Bcep18194_A5655 | DNA polymerase III, alpha subunit | chromosome 1 | CDS | 2754311 | 3531 | - | 0.6661 |
NA | Bcep18194_A4812 | NUDIX hydrolase | chromosome 1 | CDS | 1827559 | 423 | - | 0.680851 |
NA | Bcep18194_A4931 | transcriptional regulator, AraC family | chromosome 1 | CDS | 1949490 | 1065 | + | 0.626291 |
NA | Bcep18194_A5418 | TatD-related deoxyribonuclease | chromosome 1 | CDS | 2486847 | 789 | - | 0.679341 |
NA | Bcep18194_A5192 | DNA polymerase III delta prime subunit | chromosome 1 | CDS | 2237603 | 1029 | - | 0.709427 |
NA | Bcep18194_A5173 | Primosomal replication protein N-like | chromosome 1 | CDS | 2220070 | 300 | - | 0.586667 |
NA | Bcep18194_A5394 | MutS 1 protein | chromosome 1 | CDS | 2461064 | 2658 | + | 0.680587 |
NA | Bcep18194_A5562 | NUDIX hydrolase | chromosome 1 | CDS | 2658939 | 591 | - | 0.629442 |
NA | Bcep18194_A4180 | Radical SAM family protein | chromosome 1 | CDS | 1116573 | 1176 | + | 0.665816 |
NA | Bcep18194_A5383 | 3-methyladenine DNA glycosylase/8-oxoguanineDNA glycosylase | chromosome 1 | CDS | 2449704 | 828 | - | 0.687198 |
NA | Bcep18194_A4324 | Exodeoxyribonuclease V, alpha subunit | chromosome 1 | CDS | 1276629 | 2304 | + | 0.72526 |
NA | Bcep18194_A6138 | conserved hypothetical protein | chromosome 1 | CDS | 3280931 | 615 | - | 0.713821 |
NA | Bcep18194_A4976 | transposase IS66 | chromosome 1 | CDS | 2004236 | 1596 | + | 0.626566 |
NA | Bcep18194_A4632 | hypothetical protein | chromosome 1 | CDS | 1614051 | 318 | + | 0.625786 |
NA | Bcep18194_A3778 | transcriptional regulator, Fis family | chromosome 1 | CDS | 673349 | 234 | - | 0.581197 |
NA | Bcep18194_A6156 | DNA polymerase III, alpha subunit | chromosome 1 | CDS | 3303840 | 3207 | - | 0.661678 |
NA | Bcep18194_A3847 | DNA replication initiation-like ATPase | chromosome 1 | CDS | 754456 | 735 | - | 0.696599 |
NA | Bcep18194_A5334 | DNA ligase (NAD+) | chromosome 1 | CDS | 2388447 | 2076 | - | 0.67052 |
NA | Bcep18194_A4322 | Exodeoxyribonuclease V, RecC subunit | chromosome 1 | CDS | 1269587 | 3339 | + | 0.719976 |
NA | Bcep18194_A4323 | Exodeoxyribonuclease V, beta subunit | chromosome 1 | CDS | 1272922 | 3711 | + | 0.701159 |
NA | Bcep18194_A3270 | hypothetical protein | chromosome 1 | CDS | 103269 | 297 | - | 0.653199 |
NA | Bcep18194_A4920 | Methylated-DNA-(protein)-cysteineS-methyltransfe rase | chromosome 1 | CDS | 1941858 | 594 | + | 0.560606 |
NA | Bcep18194_A3184 | DNA gyrase, B subunit | chromosome 1 | CDS | 3121 | 2475 | + | 0.613737 |