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2024-06-17 04:48:06

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome

Number of genes found: 88

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thermus thermophilus HB27, HB27
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA TTC1199 putative methylated-DNA-protein-cysteine methyltransferaseSubName: Full=Putative methylated-DNA-protein-cysteine methyltransferase; EC=2.1.1.63; chromosome CDS1162330 444 - 0.736486
NA TTC1535 A/G-specific adenine DNA glycosylaseSubName: Full=A/G-specific adenine DNA glycosylase; EC=3.2.2.-; chromosome CDS1460265 978 - 0.718814
NA TTC1222 DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS1184740 1923 + 0.672907
NA TTC1220 modification methylaseSubName: Full=Modification methylase; chromosome CDS1183034 1215 + 0.714403
NA TTC1169 probable DNA-binding proteinSubName: Full=Probable DNA-binding protein; SubName: Full=Transposase; chromosome CDS1135672 954 + 0.686583
NA TTC0366 uracil-DNA glycosylaseSubName: Full=Uracil-DNA glycosylase; chromosome CDS352109 618 - 0.666667
NA TTC1509 putative DNA polymerase III subunitSubName: Full=Putative DNA polymerase III subunit; chromosome CDS1433281 807 - 0.742255
NA TTC1942 primosomal protein N'SubName: Full=Primosomal protein N; chromosome CDS1849794 2112 + 0.732481
NA TTC0784 uracil-DNA glycosylaseSubName: Full=Uracil-DNA glycosylase; chromosome CDS767637 660 + 0.719697
NA TTC1191 ribonuclease HRecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; chromosome CDS1155420 501 + 0.690619
NA TTC0005 hypothetical conserved proteinRecName: Full=UPF0102 protein TT_C0005; chromosome CDS3973 339 + 0.672566
NA TTC1005 serine protease-like proteinSubName: Full=Serine protease-like protein; chromosome CDS984175 762 + 0.724409
NA TTC1876 DNA integration/recombination/invertion proteinSubName: Full=DNA integration/recombination/invertion protein; chromosome CDS1778579 1179 - 0.696353
NA TTC1654 DNA-3-methyladenine glycosylase IISubName: Full=DNA-3-methyladenine glycosylase II; EC=3.2.2.21; chromosome CDS1569179 558 - 0.725806
NA TTC0984 putative DNA binding proteinSubName: Full=Putative DNA binding protein; chromosome CDS967096 294 + 0.629252
NA TTC0290 transposaseSubName: Full=Transposase; chromosome CDS279959 516 - 0.676357
NA TTC1859 bis(5'-nucleosyl)-tetraphosphatase(asymmetrical)SubName: Full=Bis(5-nucleosyl)-tetraphosphatase (Asymmetrical); EC=3.6.1.17; chromosome CDS1764535 465 - 0.705376
NA TTC1609 DNA polymerase III, beta chainRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1524642 1128 + 0.715426
NA TTC0577 probable transposaseSubName: Full=Probable transposase; chromosome CDS561059 624 - 0.668269
NA TTC1788 ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS1695850 612 + 0.720588
NA TTC0638 probable ATP-dependent DNA helicaseSubName: Full=Probable ATP-dependent DNA helicase; chromosome CDS625498 2574 - 0.741259
NA TTC0982 endonuclease VRecName: Full=Endonuclease V; EC=3.1.21.7; AltName: Full=Deoxyinosine 3endonuclease; AltName: Full=Deoxyribonuclease V; Short=DNase V; chromosome CDS965652 681 + 0.757709
NA TTC0665 transposaseSubName: Full=Transposase; chromosome CDS651891 1176 + 0.696429
NA TTC1230 serine/threonine protein kinaseSubName: Full=Serine/threonine protein kinase; EC=2.7.11.1; chromosome CDS1191943 1959 - 0.717713
NA TTC0918 protein kinase-like proteinSubName: Full=Protein kinase-like protein; chromosome CDS897267 783 + 0.713921
NA TTC0482 endonuclease IVRecName: Full=Probable endonuclease 4; EC=3.1.21.2; AltName: Full=Endodeoxyribonuclease IV; AltName: Full=Endonuclease IV; chromosome CDS470956 813 - 0.719557
NA TTC0445 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS432592 1587 - 0.640832
NA TTC0985 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS967412 843 - 0.739027
NA TTC1720 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS1636619 786 - 0.759542
NA TTC1588 DNA polymerase III holoenzyme tau subunitSubName: Full=DNA polymerase III holoenzyme tau subunit; EC=2.7.7.7; chromosome CDS1502604 1590 + 0.720755
NA TTC1531 excinuclease ABC subunit BRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS1452220 2007 - 0.666168
NA TTC0258 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS248633 876 - 0.711187
NA TTC0559 methyltransferaseSubName: Full=Methyltransferase; EC=2.1.1.-; chromosome CDS545110 558 + 0.72043
NA TTC1892 endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS1799785 663 + 0.701357
NA TTC0664 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS651303 468 + 0.611111
NA TTC0041 methyltransferaseSubName: Full=Methyltransferase; chromosome CDS38022 927 + 0.660194
NA TTC0690 DNA polymerase IRecName: Full=DNA polymerase; EC=2.7.7.7; chromosome CDS671122 2505 + 0.67984
NA TTC1478 yqgf-Family proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS1400580 408 - 0.70098
NA TTC1182 excinuclease ABC subunit CRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS1148519 1893 + 0.696778
NA TTC1931 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS1840330 2475 + 0.721616
NA TTC0922 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS902448 2901 - 0.744571
NA TTC1174 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1141900 1587 - 0.646503
NA TTC0578 probable transposaseSubName: Full=Probable transposase; chromosome CDS561577 516 - 0.682171
NA TTC1523 ATPaseSubName: Full=ATPase; chromosome CDS1444538 1266 + 0.71643
NA TTC0160 ADP-ribose pyrophosphataseSubName: Full=ADP-ribose pyrophosphatase; EC=3.6.1.13; chromosome CDS142512 513 - 0.660819
NA TTC1161 putative DNA repair and genetic recombination proteinRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS1127602 1587 + 0.747952
NA TTC0176 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS159510 237 + 0.620253
NA TTC1157 putative methyltransferaseSubName: Full=Putative methyltransferase; chromosome CDS1123478 1008 - 0.742063
NA TTC1170 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1137482 225 - 0.657778
NA TTC0533 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS514876 2937 + 0.695948
NA TTC1895 heat resistant RNA dependent ATPaseSubName: Full=Heat resistant RNA dependent ATPase; chromosome CDS1802867 1554 + 0.725225
NA TTC0990 DNA gyrase subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS971723 2418 + 0.682796
NA TTC0572 probable transposaseSubName: Full=Probable transposase; chromosome CDS556245 624 + 0.668269
NA TTC1806 DNA polymerase III alpha subunitSubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7; chromosome CDS1712094 6204 + 0.682463
NA TTC0896 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS874715 1773 + 0.71348
NA TTC1519 bis(5'-nucleosyl)-tetraphosphatase(asymmetrical)SubName: Full=Bis(5-nucleosyl)-tetraphosphatase (Asymmetrical); EC=3.6.1.17; chromosome CDS1442115 381 - 0.703412
NA TTC1584 putative CoA pyrophosphatase/phosphohydrolaseSubName: Full=Putative CoA pyrophosphatase/phosphohydrolase; chromosome CDS1500433 471 + 0.698514
NA TTC0461 DNA polymerase III epsilon chain-like proteinSubName: Full=DNA polymerase III epsilon chain-like protein; chromosome CDS447153 1875 - 0.729067
NA TTC0959 DNA mismatch repair enzyme (predicted ATPase)RecName: Full=DNA mismatch repair protein MutL; chromosome CDS937414 1638 - 0.730769
NA TTC0610 DNA integration/recombination/invertion proteinSubName: Full=DNA integration/recombination/invertion protein; chromosome CDS592188 942 - 0.701699
NA TTC1741 single-strand DNA binding protein (SSB)RecName: Full=Single-stranded DNA-binding protein; chromosome CDS1653827 792 + 0.69697
NA TTC0206 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS192404 744 + 0.717742
NA TTC0571 probable transposaseSubName: Full=Probable transposase; chromosome CDS555835 516 + 0.682171
NA TTC1075 excinuclease ABC subunit ARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS1043081 2859 + 0.682756
NA TTC1432 transposaseSubName: Full=Transposase; chromosome CDS1356338 1158 - 0.602763
NA TTC0289 transposaseSubName: Full=Transposase; chromosome CDS279441 624 - 0.666667
NA TTC1880 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1786343 1233 + 0.515815
NA TTC0732 NAD-dependent DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS715856 2031 - 0.66519
comE TTC1602 competence protein/comEA-related proteinSubName: Full=Competence protein/comEA-related protein; chromosome CDS1516644 228 + 0.719298
dnaA TTC1608 chromosomal replication initiator protein dnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS1523000 1341 + 0.673378
dnaB TTC1106 dnaB replication fork helicaseSubName: Full=DnaB replication fork helicase; EC=3.6.1.-; chromosome CDS1077043 1335 - 0.686142
dprA TTC1873 competence protein dprASubName: Full=Competence protein dprA; chromosome CDS1775457 1005 - 0.723383
ecJ TTC0803 single-stranded DNA specific exonuclease RecJSubName: Full=Single-stranded DNA specific exonuclease RecJ; chromosome CDS782782 2001 + 0.728636
mutM TTC1454 formamidopyrimidine-DNA glycosylase mutMRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS1372708 804 + 0.746269
mutS TTC0960 DNA mismatch repair protein mutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS939048 2436 - 0.69376
mutS TTC1282 DNA mismatch repair protein mutSRecName: Full=Endonuclease MutS2; EC=3.1.-.-; chromosome CDS1235685 2235 - 0.703803
mutT TTC1576 mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)SubName: Full=Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase); EC=3.6.1.-; chromosome CDS1495550 468 - 0.730769
mutT TTC0511 phosphohydrolase (mutT/nudix family protein)SubName: Full=Phosphohydrolase (MutT/nudix family protein); chromosome CDS495418 549 - 0.690346
recA TTC1466 recA proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1389891 1023 - 0.703812
recF TTC1721 recF proteinRecName: Full=DNA replication and repair protein RecF; chromosome CDS1637362 1032 - 0.748062
recG TTC0902 DNA helicase recGSubName: Full=DNA helicase recG; EC=3.6.1.-; chromosome CDS882252 2313 + 0.695633
recR TTC1236 recombination protein recRRecName: Full=Recombination protein RecR; chromosome CDS1198960 585 + 0.733333
ruvA TTC1696 holliday junction DNA helicase ruvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1609248 576 - 0.708333
ruvB TTC0038 holliday junction DNA helicase ruvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS35266 1011 - 0.69634
ruvC TTC0725 crossover junction endodeoxyribonuclease ruvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS710141 501 + 0.714571
sbcD TTC0923 putative exonuclease sbcDSubName: Full=Putative exonuclease sbcD; chromosome CDS905329 1119 - 0.722967
tatD TTC1084 sec-independent protein tatDSubName: Full=Sec-independent protein tatD; EC=3.1.21.-; chromosome CDS1053614 756 + 0.715608
uvrD TTC1062 DNA helicase uvrDSubName: Full=DNA helicase uvrD; chromosome CDS1031047 2079 - 0.713324