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2024-06-01 22:10:28

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome II

Number of genes found: 23

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Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PSHAb0291 putative ADA regulatory protein (Regulatory protein of adaptative response)SubName: Full=Putative ADA regulatory protein (Regulatory protein of adaptative response); chromosome II CDS340959 1365 + 0.423443
NA PSHAb0026 putative transposase IS200-likeSubName: Full=Putative transposase IS200-like; chromosome II CDS32988 276 - 0.373188
NA PSHAb0003 putative DNA helicase with SNF2 domainSubName: Full=Putative DNA helicase with SNF2 domain; chromosome II CDS2802 3147 + 0.368605
NA PSHAb0224 putative Mini-circle transposase for insertion sequence (IS117)SubName: Full=Putative Mini-circle transposase for insertion sequence (IS117); chromosome II CDS264017 303 - 0.366337
NA PSHAb0441 conserved protein of unknown functionSubName: Full=Putative uncharacterized protein; chromosome II CDS503476 306 + 0.398693
NA PSHAb0040 putative uracil-DNA glycosylase family proteinSubName: Full=Putative uracil-DNA glycosylase family protein; chromosome II CDS48095 603 - 0.437811
NA PSHAb0076 conserved protein of unknown function ; putative transposase DNA-binding domainSubName: Full=Putative uncharacterized protein; chromosome II CDS87906 1176 + 0.479592
NA PSHAb0050 conserved protein of unknown functionSubName: Full=Putative uncharacterized protein; chromosome II CDS54614 978 + 0.43047
NA PSHAb0119 putative helicase (recQ-like)SubName: Full=Putative helicase (RecQ-like); chromosome II CDS144978 1947 + 0.426297
NA PSHAb0554 putative site-specific tyrosine integrase/recombinase; may be used for the termination of replication of chromosome 2SubName: Full=Putative site-specific tyrosine integrase/recombinase; may be used for the termination of replication of chromosome 2; chromosome II CDS620550 1212 + 0.365512
NA PSHAb0027 Peyer's patch-specific virulence factor GipA (transposase)SubName: Full=Peyers patch-specific virulence factor GipA (Transposase); chromosome II CDS33532 1044 + 0.372605
NA PSHAb0039 putative protein with helicase domainSubName: Full=Putative uncharacterized protein; chromosome II CDS43759 4056 + 0.40927
NA PSHAb0096 putative ABC transporter ATP-binding proteinSubName: Full=Putative ABC transporter ATP-binding protein; chromosome II CDS113073 1959 - 0.370597
NA PSHAb0094 putative orphan proteinSubName: Full=Putative orphan protein; chromosome II CDS111838 864 - 0.329861
hupB PSHAb0462 DNA-binding protein HU-beta (NS1) (HU-1)SubName: Full=DNA-binding protein HU-beta (NS1) (HU-1); chromosome II CDS520113 276 + 0.42029
ogt PSHAb0293 putative Methylated-DNA-[protein]-cysteine S-methyltransferase; O6-methylguanine-DNA methyltransferaseSubName: Full=Putative Methylated-DNA-[protein]-cysteine S-methyltransferase O6-methylguanine-DNA methyltransferase; chromosome II CDS343858 468 + 0.429487
phr PSHAb0453 putative deoxyribodipyrimidine photolyaseSubName: Full=Putative deoxyribodipyrimidine photolyase; EC=4.1.99.3; chromosome II CDS512500 1407 + 0.41791
rhlE PSHAb0411 putative ATP-dependent RNA helicase with P-loop hydrolase domain; DEAD-box protein familySubName: Full=Putative ATP-dependent RNA helicase with P-loop hydrolase domain DEAD-box protein family; chromosome II CDS467541 1302 + 0.417051
sbcC PSHAb0054 exonuclease sbcCD subunit CSubName: Full=Exonuclease sbcCD subunit C; chromosome II CDS58038 3654 - 0.406404
sbcD PSHAb0055 exonuclease sbcCD subunit DSubName: Full=Exonuclease sbcCD subunit D; chromosome II CDS61688 1248 - 0.427885
umuC PSHAb0536 component of DNA polymerase V with UmuDSubName: Full=Component of DNA polymerase V with UmuD; EC=2.7.7.7; chromosome II CDS601249 1239 - 0.412429
xni PSHAb0468 putative exonuclease IX, 5'-3' exonucleaseRecName: Full=Flap endonuclease Xni; Short=FEN; EC=3.1.-.-; chromosome II CDS526547 774 - 0.375969
yoaA PSHAb0497 putative ATP-dependent helicase YoaA with nucleotide triphosphate hydrolase domain, SOS repair, DinG familySubName: Full=Putative ATP-dependent helicase YoaA with nucleotide triphosphate hydrolase domain, SOS repair, DinG family; EC=3.-.-.-; chromosome II CDS561458 1917 + 0.43036