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2024-06-17 06:40:24

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome 1

Number of genes found: 24

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA0557 putative endonuclease IVRecName: Full=Probable endonuclease 4; EC=3.1.21.2; AltName: Full=Endodeoxyribonuclease IV; AltName: Full=Endonuclease IV; chromosome 1 CDS256566 840 + 0.419048
NA PBPRA0409 putative RNA polymerase-associated protein HepARecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; chromosome 1 CDS64201 2919 - 0.445358
CBU1270 PBPRA0511 putative transposaseSubName: Full=Putative transposase; SubName: Full=Transposase and inactivated derivatives [Azotobacter vinelandii]; chromosome 1 CDS188709 1017 - 0.415929
ECS3688 PBPRA0576 putative DNA mismatch repair protein MutHRecName: Full=DNA mismatch repair protein MutH; AltName: Full=Methyl-directed mismatch repair protein; chromosome 1 CDS280496 669 - 0.464873
HD0172 PBPRA0577 putative MutT/nudix family proteinRecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; chromosome 1 CDS282073 525 + 0.451429
MT3534 PBPRA0510 Hypothetical transposaseSubName: Full=Hypothetical transposase; chromosome 1 CDS188067 498 - 0.423695
PARC PBPRA0456 putative DNA topoisomerase IVRecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome 1 CDS127090 2271 + 0.453985
PLU3953 PBPRA0451 Putative MutT/nudix family proteinSubName: Full=Putative MutT/nudix family protein; chromosome 1 CDS122357 633 + 0.42812
RB787 PBPRA0514 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS191251 1281 + 0.42623
S2815 PBPRA0558 putative uracil-DNA-glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome 1 CDS257807 684 + 0.413743
S3275 PBPRA0455 putative topoisomerase IV, subunit BRecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome 1 CDS125069 1884 + 0.455945
SF2878 PBPRA0568 putative single-stranded-DNA-specific exonuclease RecJSubName: Full=Putative single-stranded-DNA-specific exonuclease RecJ; chromosome 1 CDS269423 1827 + 0.454844
SF2983 PBPRA0392 hypothetical transposaseSubName: Full=Hypothetical transposase; chromosome 1 CDS46730 1224 + 0.423203
SO2276 PBPRA0512 putative transposaseSubName: Full=Putative transposase; chromosome 1 CDS189937 564 - 0.439716
SO2276 PBPRA0368 transposase and inactivated derivative [Vibrio vulnificus YJ016]SubName: Full=Transposase and inactivated derivative [Vibrio vulnificus YJ016]; chromosome 1 CDS20416 564 - 0.441489
SO2276 PBPRA0366 putative transposase and inactivated derivative [Vibrio vulnificus YJ016]SubName: Full=Putative transposase; SubName: Full=Putative transposase and inactivated derivative; SubName: Full=Putative transposase and inactivated derivative [Vibrio vulnificus YJ016]; SubName: Full=Transposase and inactivated derivative [Vibrio vulnificus YJ016]; chromosome 1 CDS19302 564 - 0.443262
SO2874 PBPRA0513 putative transposase and inactivatedderivativesSubName: Full=Putative transposase; SubName: Full=Putative transposase and inactivate derivatives; SubName: Full=Putative transposase and inactivated derivative; SubName: Full=Putative transposase and inactivated derivative [Vibrio vulnificus YJ016]; SubName: Full=Putative transposase and inactivatedderivatives; SubName: Full=Transposase and inactivated derivative [Vibrio vulnificus YJ016]; chromosome 1 CDS190502 471 - 0.409766
SO2874 PBPRA0367 putative transposase and inactivated derivative [Vibrio vulnificus YJ016]SubName: Full=Putative transposase; SubName: Full=Putative transposase and inactivate derivatives; SubName: Full=Putative transposase and inactivated derivative; SubName: Full=Putative transposase and inactivated derivative [Vibrio vulnificus YJ016]; SubName: Full=Putative transposase and inactivatedderivatives; SubName: Full=Transposase and inactivated derivative [Vibrio vulnificus YJ016]; chromosome 1 CDS19867 471 - 0.414013
STM4564 PBPRA0628 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS338418 909 + 0.40264
STY2836 PBPRA0562 putative ATP-dependent RNA helicase SrmBRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome 1 CDS262822 1260 - 0.443651
STY3389 PBPRA0431 putative DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome 1 CDS97814 1827 - 0.434045
VP0509 PBPRA0566 putative integrase/recombinase XerDRecName: Full=Tyrosine recombinase XerD; chromosome 1 CDS267622 879 + 0.442548
VV2687 PBPRA0623 Putative DNA polymerase III, psi subunitRecName: Full=DNA polymerase III subunit psi; chromosome 1 CDS333369 402 + 0.402985
YPO1874 PBPRA0515 hypothetical transposaseSubName: Full=Hypothetical transposase; SubName: Full=Uncharacterized protein; chromosome 1 CDS192873 522 - 0.396552