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2024-06-15 04:11:00

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome

Number of genes found: 85

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Mycoplasma capricolum subsp. capricolum ATCC 27343, ATCC 27343
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA MCAP_0003 primase-related proteinRecName: Full=Ribonuclease M5; EC=3.1.26.8; AltName: Full=ORF L3; AltName: Full=RNase M5; AltName: Full=Ribosomal RNA terminal maturase M5; chromosome CDS2682 543 + 0.200737
NA MCAP_0521 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS629130 2145 - 0.206527
NA MCAP_0425 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS511079 921 - 0.17481
NA MCAP_0124 hydrolase, TatD familySubName: Full=Hydrolase, TatD family; chromosome CDS149275 798 - 0.259398
NA MCAP_0796 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS918301 1353 - 0.189948
NA MCAP_0059 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS71507 1071 - 0.225023
NA MCAP_0433 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS518278 639 + 0.248826
NA MCAP_0768 deoxyribonuclease, TatD familySubName: Full=Deoxyribonuclease, TatD family; EC=3.1.21.-; chromosome CDS884729 801 - 0.238452
NA MCAP_0526 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS635564 804 - 0.202736
NA MCAP_0047 5-3 exonuclease family proteinSubName: Full=5-3 exonuclease family protein; chromosome CDS60583 915 + 0.209836
NA MCAP_0005 membrane protein, putativeRecName: Full=Uncharacterized protein MCAP_0005; AltName: Full=ORF L5; chromosome CDS4069 1095 + 0.217352
NA MCAP_0360 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS441432 2505 - 0.223553
NA MCAP_0315 transposase (IS3 family), putativeSubName: Full=Transposase (IS3 family), putative; chromosome CDS378592 1116 + 0.192652
NA MCAP_0242 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS293564 2289 + 0.20664
NA MCAP_0515 ATPase, AAA family, putativeSubName: Full=ATPase, AAA family, putative; chromosome CDS622111 1239 - 0.238902
NA MCAP_0409 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS497250 1065 - 0.252582
NA MCAP_0362 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS446899 2508 - 0.210925
NA MCAP_0346 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS415071 2589 + 0.251835
NA MCAP_0011 DNA polymerase III, delta prime subunitSubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7; chromosome CDS9074 744 + 0.180108
NA MCAP_0361 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS444199 2547 - 0.223007
NA MCAP_0172 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS211364 831 + 0.229844
NA MCAP_0115 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS132631 5898 + 0.248389
NA MCAP_0182 adenine-specific DNA methylase, putativeSubName: Full=Adenine-specific DNA methylase, putative; EC=2.1.1.72; chromosome CDS220472 648 + 0.195988
NA MCAP_0167 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS205361 1605 + 0.21433
NA MCAP_0583 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS693511 2265 - 0.262252
NA MCAP_0542 ribonuclease HII, putativeRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS651769 624 - 0.232372
NA MCAP_0268 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS323167 1356 - 0.261062
NA MCAP_0608 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS722695 1545 - 0.201942
NA MCAP_0019 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS22249 3159 + 0.223172
NA MCAP_0455 helicase, RecD/TraA family, putativeSubName: Full=Helicase, RecD/TraA family, putative; chromosome CDS541179 2196 - 0.199909
NA MCAP_0273 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS335689 540 + 0.240741
NA MCAP_0772 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS888906 951 - 0.154574
NA MCAP_0423 ImpB/MucB/SamB family proteinRecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS508728 1227 + 0.199674
NA MCAP_0721 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS837411 1245 - 0.246586
NA MCAP_0634 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS757214 1185 - 0.192405
NA MCAP_0524 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS633233 885 - 0.222599
NA MCAP_0060 endonuclease IVRecName: Full=Probable endonuclease 4; EC=3.1.21.2; AltName: Full=Endodeoxyribonuclease IV; AltName: Full=Endonuclease IV; chromosome CDS72604 870 - 0.244828
NA MCAP_0633 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS756269 936 - 0.192308
NA MCAP_0281 Single-strand binding protein familySubName: Full=Single-strand binding protein family; chromosome CDS342461 309 + 0.255663
NA MCAP_0187 transposase (IS3 family), putativeSubName: Full=Transposase (IS3 family), putative; chromosome CDS226062 1125 + 0.207111
NA MCAP_0262 serine/threonine protein kinase, putativeSubName: Full=Serine/threonine protein kinase, putative; chromosome CDS318707 1116 - 0.214158
NA MCAP_0860 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS995719 2259 - 0.211155
NA MCAP_0194 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS236419 684 - 0.22076
NA MCAP_0862 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS1000520 2253 - 0.204616
NA MCAP_0296 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS352322 804 + 0.185323
NA MCAP_0579 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS690292 696 - 0.163793
NA MCAP_0506 DNA repair protein RecORecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS604961 750 - 0.182667
NA MCAP_0348 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS420139 2580 + 0.252326
NA MCAP_0212 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS256070 798 + 0.218045
NA MCAP_0297 adenine-specific DNA methylase, putativeSubName: Full=Adenine-specific DNA methylase, putative; EC=2.1.1.72; chromosome CDS353126 669 + 0.189836
NA MCAP_0500 ATP-dependent RNA helicase, DEAD-DEAH box familySubName: Full=ATP-dependent RNA helicase, DEAD-DEAH box family; chromosome CDS597343 1362 - 0.212922
NA MCAP_0848 transposase IS1296EH (ORFA), putativeSubName: Full=Transposase IS1296EH (ORFA), putative; chromosome CDS981284 465 + 0.266667
NA MCAP_0207 methyltransferase, putativeSubName: Full=Methyltransferase, putative; chromosome CDS250437 558 + 0.188172
NA MCAP_0753 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS868232 600 + 0.238333
NA MCAP_0705 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS818538 696 - 0.202586
NA MCAP_0056 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS69481 216 - 0.231481
NA MCAP_0048 adenine-specific DNA methylase, putativeSubName: Full=Adenine-specific DNA methylase, putative; EC=2.1.1.72; chromosome CDS61692 1017 + 0.248771
NA MCAP_0215 holliday junction resolvase, putativeRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS259234 432 + 0.236111
dam MCAP_0049 DNA adenine methylaseSubName: Full=DNA adenine methylase; EC=2.1.1.72; chromosome CDS62638 978 + 0.221881
dnaA MCAP_0001 chromosomal replication initiator protein DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS1 1353 + 0.22986
dnaC MCAP_0107 replicative DNA helicaseSubName: Full=Replicative DNA helicase; EC=3.6.1.-; chromosome CDS125184 1329 + 0.274643
dnaE MCAP_0637 DNA-directed DNA polymerase III (polc)SubName: Full=DNA-directed DNA polymerase III (Polc); EC=2.7.7.7; chromosome CDS762135 2961 - 0.195542
dnaG MCAP_0504 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS601676 1815 - 0.204408
dnaN MCAP_0002 DNA polymerase III, beta subunitRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1518 1128 + 0.219858
gyrA MCAP_0040 DNA gyrase, A subunitSubName: Full=DNA gyrase, A subunit; EC=5.99.1.3; chromosome CDS48817 2388 - 0.272194
gyrB MCAP_0041 DNA gyrase, B subunitRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS51336 1905 - 0.285039
hupA MCAP_0575 DNA-binding protein HU 1SubName: Full=DNA-binding protein HU 1; chromosome CDS687004 273 - 0.267399
hupB MCAP_0313 DNA-binding protein, HUSubName: Full=DNA-binding protein, HU; chromosome CDS377232 279 - 0.215054
ligA MCAP_0712 DNA ligase, NAD-dependentRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS825742 2007 - 0.229198
mutM MCAP_0635 formamidopyrimidine-DNA glycosylaseSubName: Full=Formamidopyrimidine-DNA glycosylase; EC=3.2.2.23; chromosome CDS758556 825 - 0.221818
parC MCAP_0456 DNA topoisomerase IV, A subunitSubName: Full=DNA topoisomerase IV, A subunit; EC=5.99.1.-; chromosome CDS543485 2700 - 0.228889
parE MCAP_0457 DNA topoisomerase IV, B subunitRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS546186 1932 - 0.261905
pcrA MCAP_0717 ATP-dependent DNA helicase pcrARecName: Full=Probable DNA helicase II homolog; EC=3.6.4.12; chromosome CDS832070 2169 - 0.228216
polA MCAP_0636 DNA polymerase ISubName: Full=DNA polymerase I; EC=2.7.7.7; chromosome CDS759391 2736 - 0.210892
polC MCAP_0339 DNA polymerase III, alpha subunit, Gram-positive typeRecName: Full=DNA polymerase III polC-type; Short=PolIII; EC=2.7.7.7; chromosome CDS402434 4440 - 0.239414
recA MCAP_0551 recA proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS659001 987 - 0.261398
recM MCAP_0009 DNA repair protein RecMRecName: Full=Recombination protein RecR; chromosome CDS7862 591 + 0.209814
ruvA MCAP_0429 Holliday junction DNA helicase ruvA, putativeRecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS515351 561 - 0.180036
ssb MCAP_0025 single-strand DNA-binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS29212 441 + 0.29932
topA MCAP_0792 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS913892 1932 + 0.255176
ung MCAP_0474 uracil-DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS567220 657 - 0.208524
uvrA MCAP_0774 excinuclease ABC, A subunitRecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS892149 2841 + 0.25836
uvrB MCAP_0773 excinuclease ABC, B subunitRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS890143 1998 + 0.257758
uvrC MCAP_0252 excinuclease ABC, C subunitRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS305640 1755 - 0.211966
xseA MCAP_0057 exodeoxyribonuclease VII, large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; chromosome CDS69689 1407 - 0.228856