Gene list
Applied filters:
COG category: Replication, recombination and repair
Genomic element: chromosome
Number of genes found: 101
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Synechococcus sp. CC9605, CC9605 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Syncc9605_1720 | possible phage integrase family | SubName: Full=Possible phage integrase family; | chromosome | CDS | 1576311 | 1173 | - | 0.591645 |
NA | Syncc9605_0509 | MutS2 family protein | RecName: Full=Endonuclease MutS2; EC=3.1.-.-; | chromosome | CDS | 500151 | 2400 | + | 0.650417 |
NA | Syncc9605_1785 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1625004 | 1479 | + | 0.482759 |
NA | Syncc9605_1924 | exodeoxyribonuclease V | SubName: Full=Exodeoxyribonuclease V; | chromosome | CDS | 1745896 | 1452 | - | 0.658402 |
NA | Syncc9605_1668 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1535097 | 1128 | + | 0.583333 |
NA | Syncc9605_2466 | possible ribonuclease HI | RecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; | chromosome | CDS | 2272572 | 759 | - | 0.628458 |
NA | Syncc9605_1178 | DNA-directed DNA polymerase | SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 1105898 | 1275 | - | 0.642353 |
NA | Syncc9605_0104 | single-strand binding protein | RecName: Full=Single-stranded DNA-binding protein; | chromosome | CDS | 103294 | 378 | - | 0.624339 |
NA | Syncc9605_2250 | putative RNA methylase family UPF0020 | SubName: Full=Putative RNA methylase family UPF0020; | chromosome | CDS | 2063650 | 1143 | + | 0.632546 |
NA | Syncc9605_2543 | replicative DNA helicase | SubName: Full=Replicative DNA helicase; | chromosome | CDS | 2360312 | 1407 | + | 0.636816 |
NA | Syncc9605_0492 | formamidopyrimidine-DNA glycosylase | RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; | chromosome | CDS | 481680 | 837 | - | 0.594982 |
NA | Syncc9605_0118 | Holliday junction DNA helicase RuvB | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome | CDS | 115254 | 1047 | + | 0.65234 |
NA | Syncc9605_0001 | DNA polymerase III, beta subunit | RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; | chromosome | CDS | 231 | 1158 | + | 0.596718 |
NA | Syncc9605_1229 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1150493 | 1221 | + | 0.570025 |
NA | Syncc9605_1084 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1022601 | 186 | - | 0.564516 |
NA | Syncc9605_0384 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 384194 | 1446 | - | 0.643845 |
NA | Syncc9605_1378 | Site-specific recombinase XerD-like | SubName: Full=Site-specific recombinase XerD-like; | chromosome | CDS | 1293375 | 1203 | - | 0.54281 |
NA | Syncc9605_0005 | DNA gyrase/topoisomerase IV, subunit A | SubName: Full=DNA gyrase/topoisomerase IV, subunit A; | chromosome | CDS | 6019 | 2469 | - | 0.609964 |
NA | Syncc9605_1142 | Exonuclease | SubName: Full=Exonuclease; | chromosome | CDS | 1073750 | 843 | + | 0.635824 |
NA | Syncc9605_2324 | exodeoxyribonuclease VII, large subunit | RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; | chromosome | CDS | 2132446 | 1200 | + | 0.619167 |
NA | Syncc9605_2304 | ATPase | SubName: Full=ATPase; | chromosome | CDS | 2110344 | 2166 | + | 0.631579 |
NA | Syncc9605_2068 | TatD-related deoxyribonuclease | SubName: Full=TatD-related deoxyribonuclease; | chromosome | CDS | 1892142 | 789 | - | 0.632446 |
NA | Syncc9605_0518 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 509952 | 327 | - | 0.593272 |
NA | Syncc9605_0475 | putative DNA processing protein (Smf family) | SubName: Full=Putative DNA processing protein (Smf family); | chromosome | CDS | 462955 | 1017 | + | 0.625369 |
NA | Syncc9605_1651 | probable exodeoxyribonuclease V, beta subunit RecB | SubName: Full=Probable exodeoxyribonuclease V, beta subunit RecB; | chromosome | CDS | 1519426 | 3681 | - | 0.666667 |
NA | Syncc9605_1717 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1573622 | 576 | + | 0.576389 |
NA | Syncc9605_1489 | endonuclease III | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 1387961 | 654 | + | 0.642202 |
NA | Syncc9605_1164 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1095887 | 285 | + | 0.403509 |
NA | Syncc9605_0070 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 68726 | 690 | - | 0.611594 |
NA | Syncc9605_1942 | DNA gyrase, A subunit | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 1761437 | 2598 | - | 0.643572 |
NA | Syncc9605_0682 | primosomal protein N' (replication factor Y) | SubName: Full=Primosomal protein N (Replication factor Y); | chromosome | CDS | 653009 | 2250 | + | 0.646222 |
NA | Syncc9605_0218 | probable deoxyribodipyrimidine photolyase | SubName: Full=Probable deoxyribodipyrimidine photolyase; | chromosome | CDS | 224889 | 912 | - | 0.648026 |
NA | Syncc9605_1966 | DNA polymerase I | SubName: Full=DNA polymerase I; EC=2.7.7.7; | chromosome | CDS | 1785070 | 2961 | + | 0.637285 |
NA | Syncc9605_0495 | ATP-dependent DNA helicase, RecQ family | SubName: Full=ATP-dependent DNA helicase, RecQ family; | chromosome | CDS | 483994 | 1413 | + | 0.666667 |
NA | Syncc9605_1462 | putative ATP-dependent DNA ligase | SubName: Full=Putative ATP-dependent DNA ligase; | chromosome | CDS | 1369946 | 1692 | + | 0.61052 |
NA | Syncc9605_1802 | possible alkylated DNA repair protein | SubName: Full=Possible alkylated DNA repair protein; | chromosome | CDS | 1640901 | 585 | + | 0.565812 |
NA | Syncc9605_0062 | DNA-directed DNA polymerase | SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 58482 | 1845 | - | 0.667209 |
NA | Syncc9605_1706 | possible phage integrase family | SubName: Full=Possible phage integrase family; | chromosome | CDS | 1562649 | 1173 | - | 0.60017 |
NA | Syncc9605_0291 | DNA-3-methyladenine glycosylase | RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; | chromosome | CDS | 295906 | 681 | + | 0.61674 |
NA | Syncc9605_0213 | Deoxyribodipyrimidine photolyase | SubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; | chromosome | CDS | 220618 | 1434 | + | 0.636681 |
NA | Syncc9605_1870 | Holliday junction resolvase YqgF | RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; | chromosome | CDS | 1699867 | 477 | - | 0.702306 |
NA | Syncc9605_0080 | excinuclease ABC, B subunit | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 78836 | 2109 | + | 0.628734 |
NA | Syncc9605_2520 | DEAD/DEAH box helicase-like | SubName: Full=DEAD/DEAH box helicase-like; | chromosome | CDS | 2330541 | 3198 | + | 0.654784 |
NA | Syncc9605_2139 | RecA-family ATPase-like | SubName: Full=RecA-family ATPase-like; | chromosome | CDS | 1958723 | 1929 | - | 0.569207 |
NA | Syncc9605_2243 | weak similarity to phage integrase family | SubName: Full=Weak similarity to phage integrase family; | chromosome | CDS | 2055286 | 1215 | + | 0.557202 |
NA | Syncc9605_0087 | DNA gyrase, B subunit | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 88692 | 1968 | + | 0.606199 |
NA | Syncc9605_0072 | DNA polymerase III, delta subunit | SubName: Full=DNA polymerase III, delta subunit; | chromosome | CDS | 71394 | 966 | - | 0.663561 |
NA | Syncc9605_1158 | DNA polymerase III, alpha subunit | SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7; | chromosome | CDS | 1088792 | 3519 | + | 0.590225 |
NA | Syncc9605_2379 | DNA polymerase III, delta prime subunit | SubName: Full=DNA polymerase III, delta prime subunit; | chromosome | CDS | 2192388 | 945 | - | 0.651852 |
NA | Syncc9605_0649 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 624174 | 537 | + | 0.566108 |
NA | Syncc9605_0945 | phage integrase family | SubName: Full=Phage integrase family; | chromosome | CDS | 908947 | 636 | - | 0.559748 |
NA | Syncc9605_0786 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 750996 | 972 | - | 0.515432 |
NA | Syncc9605_0715 | phage integrase family | SubName: Full=Phage integrase family; | chromosome | CDS | 683657 | 1155 | - | 0.670996 |
NA | Syncc9605_0314 | Ribonuclease H | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 320086 | 600 | + | 0.638333 |
NA | Syncc9605_2042 | DEAD/DEAH box helicase-like | SubName: Full=DEAD/DEAH box helicase-like; | chromosome | CDS | 1863063 | 2775 | - | 0.638919 |
NA | Syncc9605_2692 | DNA repair protein RecN | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome | CDS | 2505072 | 1683 | - | 0.612002 |
NA | Syncc9605_1482 | NUDIX family protein | SubName: Full=NUDIX family protein; | chromosome | CDS | 1382251 | 432 | + | 0.634259 |
NA | Syncc9605_2325 | exodeoxyribonuclease VII small subunit | SubName: Full=Exodeoxyribonuclease VII small subunit; | chromosome | CDS | 2133645 | 270 | + | 0.555556 |
NA | Syncc9605_1979 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1799305 | 1308 | + | 0.644495 |
NA | Syncc9605_1175 | DNA primase | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 1103219 | 2049 | + | 0.624695 |
NA | Syncc9605_1318 | single-stranded-DNA-specific exonuclease RecJ | SubName: Full=Single-stranded-DNA-specific exonuclease RecJ; | chromosome | CDS | 1230840 | 1857 | - | 0.625202 |
NA | Syncc9605_0178 | ATP-dependent DNA helicase PcrA | SubName: Full=ATP-dependent DNA helicase PcrA; | chromosome | CDS | 183158 | 2391 | + | 0.621497 |
NA | Syncc9605_1947 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1767064 | 621 | + | 0.636071 |
NA | Syncc9605_0782 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 745424 | 843 | + | 0.501779 |
NA | Syncc9605_1419 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1333476 | 702 | + | 0.480057 |
NA | Syncc9605_2196 | anchor polypeptide LCM | SubName: Full=Anchor polypeptide LCM; | chromosome | CDS | 2008904 | 2952 | + | 0.612127 |
NA | Syncc9605_1363 | excinuclease ABC, C subunit | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 1277902 | 1986 | - | 0.625881 |
NA | Syncc9605_0708 | Deoxyribodipyrimidine photolyase | SubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; | chromosome | CDS | 678084 | 1482 | + | 0.621458 |
NA | Syncc9605_0597 | DNA topoisomerase I | RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; | chromosome | CDS | 577798 | 2700 | + | 0.621852 |
NA | Syncc9605_1297 | phage SPO1 DNA polymerase-related protein | SubName: Full=Phage SPO1 DNA polymerase-related protein; | chromosome | CDS | 1209114 | 564 | + | 0.606383 |
NA | Syncc9605_2237 | Site-specific recombinase XerD-like | SubName: Full=Site-specific recombinase XerD-like; | chromosome | CDS | 2050037 | 678 | - | 0.60472 |
NA | Syncc9605_2322 | ATP-dependent helicase HrpB | SubName: Full=ATP-dependent helicase HrpB; | chromosome | CDS | 2129466 | 2505 | + | 0.651896 |
NA | Syncc9605_0803 | methylated-DNA--protein-cysteinemethyltransferase | SubName: Full=Methylated-DNA--protein-cysteine methyltransferase; | chromosome | CDS | 767471 | 423 | + | 0.635934 |
NA | Syncc9605_0078 | DNA mismatch repair protein MutS | RecName: Full=DNA mismatch repair protein MutS; | chromosome | CDS | 75614 | 2712 | - | 0.675147 |
NA | Syncc9605_0038 | DEAD/DEAH box helicase-like | SubName: Full=DEAD/DEAH box helicase-like; | chromosome | CDS | 36970 | 1605 | + | 0.647352 |
NA | Syncc9605_0685 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 657206 | 543 | - | 0.616943 |
NA | Syncc9605_0687 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 658036 | 459 | - | 0.642702 |
NA | Syncc9605_1225 | ATP-dependent DNA helicase RecG | SubName: Full=ATP-dependent DNA helicase RecG; | chromosome | CDS | 1143302 | 2439 | + | 0.628126 |
NA | Syncc9605_0781 | nuclease (SNase-like) | SubName: Full=Nuclease (SNase-like); | chromosome | CDS | 744609 | 345 | + | 0.582609 |
NA | Syncc9605_1300 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 1212529 | 3579 | - | 0.612462 |
NA | Syncc9605_1653 | exodeoxyribonuclease V, gamma subunit | SubName: Full=Exodeoxyribonuclease V, gamma subunit; | chromosome | CDS | 1523471 | 3246 | - | 0.673444 |
NA | Syncc9605_1953 | Holliday junction resolvase RuvC | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome | CDS | 1772607 | 465 | + | 0.632258 |
NA | Syncc9605_0973 | chromosomal replication initiator protein DnaA | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 927763 | 1353 | + | 0.628234 |
NA | Syncc9605_2571 | possible phage integrase family | SubName: Full=Possible phage integrase family; | chromosome | CDS | 2385705 | 1278 | + | 0.564163 |
NA | Syncc9605_0212 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 220058 | 561 | + | 0.655971 |
NA | Syncc9605_1650 | probable exodeoxyribonuclease V, alpha subunit RecD | SubName: Full=Probable exodeoxyribonuclease V, alpha subunit RecD; | chromosome | CDS | 1517849 | 1581 | - | 0.672992 |
NA | Syncc9605_2552 | DNA ligase, NAD-dependent | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 2367605 | 2043 | + | 0.666667 |
NA | Syncc9605_2092 | Histone-like DNA-binding protein | SubName: Full=Histone-like DNA-binding protein; | chromosome | CDS | 1916472 | 276 | - | 0.576087 |
NA | Syncc9605_0563 | phage integrase family | SubName: Full=Phage integrase family; | chromosome | CDS | 545219 | 576 | + | 0.574653 |
NA | Syncc9605_1648 | DEAD/DEAH box helicase-like | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 1515608 | 1824 | - | 0.622807 |
NA | Syncc9605_0381 | recA protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 382369 | 1125 | + | 0.601778 |
NA | Syncc9605_0148 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 147856 | 1986 | - | 0.327291 |
NA | Syncc9605_0936 | phage integrase family | SubName: Full=Phage integrase family; | chromosome | CDS | 900783 | 507 | - | 0.510848 |
NA | Syncc9605_0099 | mutator mutT protein | SubName: Full=Mutator mutT protein; | chromosome | CDS | 98442 | 1191 | + | 0.639798 |
NA | Syncc9605_1161 | Holliday junction DNA helicase RuvA | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 1093099 | 645 | - | 0.539535 |
NA | Syncc9605_2691 | excinuclease ABC, A subunit | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 2502063 | 2964 | - | 0.601552 |
NA | Syncc9605_0865 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 835706 | 1125 | - | 0.528889 |
NA | Syncc9605_1639 | recombination protein RecR | RecName: Full=Recombination protein RecR; | chromosome | CDS | 1508166 | 660 | - | 0.627273 |
NA | Syncc9605_0394 | DNA replication and repair protein RecF | RecName: Full=DNA replication and repair protein RecF; | chromosome | CDS | 393619 | 1095 | - | 0.642009 |
NA | Syncc9605_1411 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1326213 | 1584 | + | 0.551136 |
NA | Syncc9605_0661 | exodeoxyribonuclease III | SubName: Full=Exodeoxyribonuclease III; | chromosome | CDS | 634075 | 867 | - | 0.608997 |