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2024-05-29 09:26:00

Gene list

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COG category: Replication, recombination and repair
Genomic element: pHCM1

Number of genes found: 30

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
HCM1.103 putative DNA helicaseSubName: Full=Putative DNA helicase; pHCM1 CDS78416 2040 + 0.504902
HCM1.134c putative recombinaseSubName: Full=Putative recombinase; SubName: Full=Uncharacterized protein; pHCM1 CDS104515 1182 - 0.50423
HCM1.162c putative transposaseSubName: Full=Putative transposase; pHCM1 CDS119023 765 - 0.610458
HCM1.187c putative DNA modification methylaseRecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; pHCM1 CDS137517 1428 - 0.489496
HCM1.188 putative nucleaseSubName: Full=Putative nuclease; pHCM1 CDS139168 516 + 0.484496
HCM1.194 transposaseSubName: Full=Putative transposase; SubName: Full=Transposase; pHCM1 CDS143085 1209 + 0.450786
HCM1.201 putative transposaseSubName: Full=Putative transposase; pHCM1 CDS151052 1398 + 0.528612
HCM1.209c putative transposaseSubName: Full=Putative transposase; pHCM1 CDS156075 1005 - 0.481592
HCM1.213c putative transposaseSubName: Full=Putative transposase; pHCM1 CDS160707 705 - 0.530496
HCM1.219 putative transposaseSubName: Full=Putative transposase; pHCM1 CDS163369 705 + 0.531915
HCM1.236 putative transposaseSubName: Full=Putative transposase; pHCM1 CDS175403 1005 + 0.490547
HCM1.249c transposaseSubName: Full=Putative transposase; SubName: Full=Transposase; pHCM1 CDS183230 1209 - 0.450786
HCM1.57c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS34194 1755 - 0.501994
HCM1.59 putative DNA modification methylaseSubName: Full=Putative DNA modification methylase; pHCM1 CDS37651 825 + 0.476364
insA putative IS1 transposaseSubName: Full=IS1 transposase; SubName: Full=Insertion element IS1 protein; SubName: Full=Insertion element IS1 protein InsA; SubName: Full=Putative IS1 transposase; pHCM1 CDS153973 276 - 0.536232
insA putative IS1 transposaseSubName: Full=IS1 transposase; SubName: Full=Insertion element IS1 protein; SubName: Full=Insertion element IS1 protein InsA; SubName: Full=Putative IS1 transposase; pHCM1 CDS177180 276 - 0.536232
insA putative IS1 transposaseRecName: Full=Insertion element IS1 protein InsA; pHCM1 CDS2265 276 - 0.528986
insA putative IS1 transposaseSubName: Full=Putative IS1 transposase; pHCM1 CDS106430 276 + 0.528986
insA putative IS1 transposaseSubName: Full=IS1 transposase; SubName: Full=Insertion element IS1 protein; SubName: Full=Insertion element IS1 protein InsA; SubName: Full=Putative IS1 transposase; pHCM1 CDS108842 276 + 0.532609
insB putative IS1 transposaseSubName: Full=Insertion element IS1 protein InsB; SubName: Full=Putative IS1 transposase; pHCM1 CDS176758 504 - 0.551587
insB putative IS1 transposaseSubName: Full=Insertion element IS1 protein InsB; SubName: Full=Putative IS1 transposase; pHCM1 CDS153551 504 - 0.551587
insB putative IS1 transposaseSubName: Full=Putative IS1 transposase; pHCM1 CDS109036 504 + 0.545635
insB putative IS1 transposaseSubName: Full=Putative IS1 transposase; pHCM1 CDS106624 504 + 0.547619
insB putative IS1 transposaseSubName: Full=Putative IS1 transposase; pHCM1 CDS1876 471 - 0.545648
int putative integraseRecName: Full=Integrase/recombinase; AltName: Full=E2 protein; pHCM1 CDS121046 1014 + 0.61144
mucB putative DNA-repair modulatorSubName: Full=Putative DNA-repair modulator; pHCM1 CDS186216 1260 + 0.525397
rep putative replication initiation proteinRecName: Full=Replication initiation protein; Short=Protein E; Short=Protein rep; pHCM1 CDS107709 756 + 0.480159
tnpA transposaseSubName: Full=Transposase; pHCM1 CDS122925 2973 + 0.60444
tnpR resolvaseSubName: Full=Resolvase; pHCM1 CDS122365 558 + 0.611111
trhI putative DNA helicaseSubName: Full=Putative DNA helicase; SubName: Full=TrhI; pHCM1 CDS82216 1857 + 0.436187