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2024-06-10 04:24:20

Gene list

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COG category: Replication, recombination and repair
Genomic element: megaplasmid

Number of genes found: 44

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shewanella oneidensis MR-1, MR-1
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
SOA0004 type II DNA modification methyltransferase megaplasmid CDS3938 1713 - 0.332166
SOA0016 ISSod9, transposaseSubName: Full=ISSod9 transposase TnpA_ISSod9; megaplasmid CDS12945 2967 - 0.557465
SOA0019 ISSod9, DNA-invertaseSubName: Full=ISSod9 resolvase TnpR_ISSod9; megaplasmid CDS16733 558 + 0.514337
SOA0024 ISSod1, transposase OrfB megaplasmid CDS19523 810 - 0.45679
SOA0025 ISSod1, transposase OrfA megaplasmid CDS20392 291 - 0.436426
SOA0026 site-specific recombinase, resolvase family megaplasmid CDS20759 309 - 0.449838
SOA0028 ISSod1, transposase OrfA megaplasmid CDS21138 291 + 0.439863
SOA0029 ISSod1, transposase OrfB megaplasmid CDS21488 810 + 0.45679
SOA0035 ISSod4, transposaseSubName: Full=ISSod4 transposase TnpA_ISSod4; megaplasmid CDS26127 1203 - 0.428096
SOA0037 ISSod1, transposase OrfB megaplasmid CDS28346 810 - 0.45679
SOA0038 ISSod1, transposase OrfA megaplasmid CDS29215 291 - 0.439863
SOA0044 site-specific recombinase, phage integrase familySubName: Full=Site-specific recombinase phage integrase family; megaplasmid CDS32496 1131 + 0.471264
SOA0045 site-specific recombinase, phage integrase family megaplasmid CDS33728 1266 + 0.462085
SOA0053 ISSod1, transposase OrfA megaplasmid CDS45061 291 + 0.439863
SOA0054 ISSod1, transposase OrfB megaplasmid CDS45411 810 + 0.45679
SOA0063 ISSod8, transposaseSubName: Full=ISSod8 transposase TnpA_ISSod8; megaplasmid CDS50928 558 + 0.415771
SOA0065 ISSod1, transposase OrfA megaplasmid CDS52829 291 + 0.436426
SOA0066 ISSod1, transposase OrfB megaplasmid CDS53179 810 + 0.45679
SOA0074 ISSod6, transposaseSubName: Full=ISSod6 transposase TnpA_ISSod6; megaplasmid CDS58734 759 - 0.433465
SOA0077 site-specific recombinase, resolvase familySubName: Full=Recombinase resolvase family; megaplasmid CDS60346 636 - 0.443396
SOA0083 ISSod4, transposaseSubName: Full=ISSod4 transposase TnpA_ISSod4; megaplasmid CDS63339 1203 + 0.432253
SOA0085 ISSod8, transposaseSubName: Full=ISSod8 transposase TnpA_ISSod8; megaplasmid CDS65906 546 - 0.415751
SOA0086 site-specific recombinase, resolvase familySubName: Full=ISSpu16 resolvase TnpR_ISSpu16; megaplasmid CDS66535 591 - 0.43824
SOA0090 ISSod1, transposase OrfA megaplasmid CDS69314 291 + 0.436426
SOA0091 ISSod1, transposase OrfB megaplasmid CDS69664 810 + 0.45679
SOA0097 ISSod6, transposaseSubName: Full=ISSod6 transposase TnpA_ISSod6; megaplasmid CDS75737 759 - 0.429513
SOA0102 ISSod3, transposase megaplasmid CDS82906 1209 + 0.468983
SOA0105 ISSod8, transposaseSubName: Full=ISSod8 transposase TnpA_ISSod8; megaplasmid CDS84452 558 + 0.417563
SOA0118 conserved domain protein megaplasmid CDS105531 564 + 0.482269
SOA0119 ISSod13, transposaseSubName: Full=ISSod13 transposase TnpA_ISSod13; megaplasmid CDS106554 1041 + 0.474544
SOA0123 conserved domain protein megaplasmid CDS109721 210 - 0.404762
SOA0129 transposase, IS3 family megaplasmid CDS113440 840 + 0.465476
SOA0130 ISSod4, transposaseSubName: Full=ISSod4 transposase TnpA_ISSod4; megaplasmid CDS114492 1203 - 0.429759
SOA0136 ISSod3, transposase megaplasmid CDS120598 1209 - 0.468983
SOA0142 ISSod13, transposaseSubName: Full=ISSod13 transposase TnpA_ISSod13; megaplasmid CDS130884 1041 + 0.474544
SOA0144 ISSod4, transposaseSubName: Full=ISSod4 transposase TnpA_ISSod4; megaplasmid CDS132330 1203 + 0.432253
SOA0145 ISSod1, transposase OrfB megaplasmid CDS133536 645 - 0.477519
SOA0146 ISSod1, transposase OrfA megaplasmid CDS134240 291 - 0.439863
SOA0151 ISSod13, transposaseSubName: Full=ISSod13 transposase TnpA_ISSod13; megaplasmid CDS138290 1041 - 0.474544
SOA0162 ISSod6, transposaseSubName: Full=ISSod6 transposase TnpA_ISSod6; megaplasmid CDS150372 759 - 0.428195
SOA0167 ISSod9, transposaseSubName: Full=ISSod9 transposase TnpA_ISSod9; megaplasmid CDS155302 2967 - 0.557465
SOA0170 ISSod9, DNA-invertaseSubName: Full=ISSod9 resolvase TnpR_ISSod9; megaplasmid CDS159090 558 + 0.514337
SOA0172 site-specific recombinase, resolvase familySubName: Full=Site-specific recombinase resolvase family; megaplasmid CDS160178 627 - 0.45614
umuC umuC proteinSubName: Full=DNA polymerase V subunit UmuC; megaplasmid CDS10078 1257 - 0.488465