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2024-06-17 13:13:01

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome

Number of genes found: 137

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Streptococcus pyogenes phage 6180.4
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA M28_Spy0717 mutator protein TSubName: Full=Mutator protein T; EC=3.6.1.-; chromosome CDS737716 477 + 0.396226
NA M28_Spy0855 hypothetical cytosolic proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS874250 441 - 0.371882
NA M28_Spy0752 transposaseSubName: Full=Transposase; chromosome CDS777738 1143 + 0.379703
NA M28_Spy1104 transposaseSubName: Full=Transposase; chromosome CDS1109097 1143 - 0.381452
NA M28_Spy1285 DNA integration/recombination/invertion proteinSubName: Full=DNA integration/recombination/invertion protein; chromosome CDS1267971 1158 + 0.375648
NA M28_Spy1105 DNA polymerase III subunit gamma/tauSubName: Full=DNA polymerase III subunit gamma/tau; EC=2.7.7.7; chromosome CDS1110500 1686 - 0.414591
NA M28_Spy1684 ATPase, AAA familySubName: Full=ATPase, AAA family; chromosome CDS1689606 1269 + 0.429472
NA M28_Spy0339 transposaseSubName: Full=Transposase; chromosome CDS360431 246 - 0.382114
NA M28_Spy1206 methyltransferaseSubName: Full=Methyltransferase; EC=2.1.1.-; chromosome CDS1212003 540 - 0.37963
NA M28_Spy1277 phage proteinSubName: Full=Phage protein; chromosome CDS1263719 345 - 0.342029
NA M28_Spy0749 hypothetical cytosolic proteinRecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; chromosome CDS775337 870 + 0.356322
NA M28_Spy1289 hypothetical cytosolic proteinRecName: Full=CRISPR-associated endoribonuclease Cas2; EC=3.1.-.-; chromosome CDS1272140 294 - 0.391156
NA M28_Spy1896 transposaseSubName: Full=Transposase; chromosome CDS1893593 588 - 0.411565
NA M28_Spy0215 ribonuclease M5RecName: Full=Ribonuclease M5; EC=3.1.26.8; AltName: Full=RNase M5; AltName: Full=Ribosomal RNA terminal maturase M5; chromosome CDS229700 612 + 0.454248
NA M28_Spy0170 transposaseSubName: Full=Transposase; chromosome CDS188397 534 - 0.363296
NA M28_Spy0632 cell surface proteinSubName: Full=Cell surface protein; chromosome CDS653876 3027 + 0.358771
NA M28_Spy1335 transposaseSubName: Full=Transposase; chromosome CDS1315777 186 + 0.354839
NA M28_Spy1632 DNA integration/recombination/invertion proteinSubName: Full=DNA integration/recombination/invertion protein; chromosome CDS1635136 342 + 0.412281
NA M28_Spy1406 ATP-dependent RNA helicaseSubName: Full=ATP-dependent RNA helicase; chromosome CDS1403015 1344 - 0.419643
NA M28_Spy0440 chromosome segregation ATPasesSubName: Full=Chromosome segregation ATPases; chromosome CDS449892 1659 - 0.364678
NA M28_Spy1321 transcriptional regulator, Cro/CI familySubName: Full=Transcriptional regulator, Cro/CI family; chromosome CDS1300598 1242 - 0.311594
NA M28_Spy1146 hypothetical protein with endo/excinuclease domainRecName: Full=UPF0213 protein M28_Spy1146; chromosome CDS1151083 279 + 0.365591
NA M28_Spy1633 DNA integration/recombination/invertion proteinSubName: Full=DNA integration/recombination/invertion protein; chromosome CDS1635838 150 + 0.353333
NA M28_Spy0163 transposaseSubName: Full=Transposase; chromosome CDS183636 216 - 0.342593
NA M28_Spy0381 transposaseSubName: Full=Transposase; chromosome CDS396169 267 - 0.355805
NA M28_Spy1014 phage DNA/RNA helicaseSubName: Full=Phage DNA/RNA helicase; chromosome CDS1021606 1368 - 0.361111
NA M28_Spy1864 DNA integration/recombination/invertion proteinSubName: Full=DNA integration/recombination/invertion protein; chromosome CDS1856284 1164 + 0.379725
NA M28_Spy1833 phosphohydrolaseSubName: Full=Phosphohydrolase; chromosome CDS1839809 642 - 0.390966
NA M28_Spy0373 uracil DNA glycosylase superfamily proteinSubName: Full=Uracil DNA glycosylase superfamily protein; chromosome CDS391459 576 + 0.421875
NA M28_Spy1033 DNA integration/recombination/invertion proteinSubName: Full=DNA integration/recombination/invertion protein; chromosome CDS1031217 1125 + 0.335111
NA M28_Spy0165 transposaseSubName: Full=Transposase; chromosome CDS184164 297 - 0.377104
NA M28_Spy0377 phosphohydrolaseSubName: Full=Phosphohydrolase; chromosome CDS394069 522 + 0.404215
NA M28_Spy0249 transposaseSubName: Full=Transposase; chromosome CDS267765 147 - 0.37415
NA M28_Spy1302 transposaseSubName: Full=Transposase; chromosome CDS1284967 1143 - 0.381452
NA M28_Spy0857 ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS875822 717 + 0.414226
NA M28_Spy1079 site-specific recombinaseSubName: Full=Site-specific recombinase; chromosome CDS1081126 1680 - 0.341071
NA M28_Spy0530 DNA integration/recombination/invertion proteinSubName: Full=DNA integration/recombination/invertion protein; chromosome CDS539084 216 - 0.337963
NA M28_Spy0382 transposaseSubName: Full=Transposase; chromosome CDS396348 582 - 0.376289
NA M28_Spy1162 DNA-binding protein HUSubName: Full=DNA-binding protein HU; chromosome CDS1168755 276 - 0.405797
NA M28_Spy1290 hypothetical proteinRecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; chromosome CDS1272444 1026 - 0.380117
NA M28_Spy1291 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1273466 675 - 0.397037
NA M28_Spy1072 transposaseSubName: Full=Transposase; chromosome CDS1074338 807 + 0.400248
NA M28_Spy1789 DNA integration/recombination/invertion proteinSubName: Full=DNA integration/recombination/invertion protein; chromosome CDS1807287 1164 - 0.357388
NA M28_Spy0164 transposaseSubName: Full=Transposase; chromosome CDS183891 171 - 0.415205
NA M28_Spy1392 methyltransferaseSubName: Full=Methyltransferase; EC=2.1.1.-; chromosome CDS1388577 1155 - 0.397403
NA M28_Spy0448 transposaseSubName: Full=Transposase; chromosome CDS455123 732 - 0.333333
NA M28_Spy1172 exodeoxyribonuclease VII large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; chromosome CDS1176734 1356 - 0.424041
NA M28_Spy1812 phage proteinSubName: Full=Phage protein; chromosome CDS1820050 384 + 0.377604
NA M28_Spy0449 transposaseSubName: Full=Transposase; chromosome CDS455974 321 - 0.367601
NA M28_Spy0032 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS49860 1452 + 0.307163
NA M28_Spy0536 transposaseSubName: Full=Transposase; chromosome CDS547001 645 - 0.404651
NA M28_Spy0444 RelB-domain proteinSubName: Full=RelB-domain protein; chromosome CDS452878 330 + 0.372727
NA M28_Spy1871 phosphohydrolaseSubName: Full=Phosphohydrolase; chromosome CDS1865168 318 - 0.352201
NA M28_Spy1140 DNA polymerase III, delta subunitSubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; chromosome CDS1145264 1041 - 0.367915
NA M28_Spy1071 transposaseSubName: Full=Transposase; chromosome CDS1073784 534 + 0.363296
NA M28_Spy1334 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1315463 294 - 0.295918
NA M28_Spy0859 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS877546 2130 + 0.381221
NA M28_Spy1552 ribonuclease HIIIRecName: Full=Ribonuclease HIII; Short=RNase HIII; EC=3.1.26.4; chromosome CDS1550089 903 + 0.368771
NA M28_Spy1303 DNA integration/recombination/invertion proteinSubName: Full=DNA integration/recombination/invertion protein; chromosome CDS1286437 1137 - 0.283201
NA M28_Spy1698 transposaseSubName: Full=Transposase; chromosome CDS1703054 1143 - 0.381452
NA M28_Spy1086 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1089612 291 - 0.254296
NA M28_Spy1848 phage proteinSubName: Full=Phage protein; chromosome CDS1848815 789 - 0.358682
NA M28_Spy0352 phosphohydrolaseSubName: Full=Phosphohydrolase; chromosome CDS372441 555 + 0.409009
NA M28_Spy0340 transposaseSubName: Full=Transposase; chromosome CDS360965 459 - 0.420479
NA M28_Spy1083 nickaseSubName: Full=Nickase; chromosome CDS1085573 1230 - 0.266667
NA M28_Spy0774 DNA-cytosine methyltransferaseSubName: Full=DNA-cytosine methyltransferase; chromosome CDS800079 333 + 0.414414
NA M28_Spy1266 phage proteinSubName: Full=Phage protein; chromosome CDS1259763 441 - 0.387755
NA M28_Spy0296 DNA integration/recombination/invertion proteinRecName: Full=Tyrosine recombinase XerD-like; chromosome CDS316741 747 + 0.331995
NA M28_Spy0793 integrase pseudogene chromosome CDS814296 384 + 0.356771
NA M28_Spy0091 adenine-specific methyltransferaseSubName: Full=Adenine-specific methyltransferase; EC=2.1.1.72; chromosome CDS105208 999 + 0.38038
NA M28_Spy1274 DnaD-like proteinSubName: Full=DnaD-like protein; chromosome CDS1262619 414 - 0.362319
NA M28_Spy1780 hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS1798758 420 - 0.378571
NA M28_Spy0169 transposaseSubName: Full=Transposase; chromosome CDS187570 807 - 0.402726
NA M28_Spy0998 phage terminase small subunitSubName: Full=Phage terminase small subunit; chromosome CDS1011585 546 - 0.384615
NA M28_Spy0166 transposaseSubName: Full=Transposase; chromosome CDS184493 294 - 0.377551
comEA M28_Spy1143 ComE operon protein 1SubName: Full=ComE operon protein 1; chromosome CDS1148598 663 - 0.374057
comFA M28_Spy1368 ComF operon protein 1SubName: Full=ComF operon protein 1; chromosome CDS1362949 1326 - 0.362745
deaD M28_Spy1148 ATP-dependent RNA helicaseSubName: Full=ATP-dependent RNA helicase; chromosome CDS1153512 1620 - 0.417901
deaD2 M28_Spy1110 ATP-dependent RNA helicaseSubName: Full=ATP-dependent RNA helicase; chromosome CDS1114723 1119 + 0.387846
dinG M28_Spy0514 ATP-dependent helicaseSubName: Full=ATP-dependent helicase; chromosome CDS520381 2502 + 0.380096
dinP M28_Spy1556 DNA polymerase IVRecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS1554682 1095 - 0.417352
dnaA M28_Spy0001 chromosomal replication initiator proteinRecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS202 1356 + 0.332596
dnaB M28_Spy0277 replicative DNA helicaseSubName: Full=Replicative DNA helicase; EC=3.6.1.-; chromosome CDS297529 1176 + 0.371599
dnaD M28_Spy0709 phage proteinSubName: Full=Phage protein; chromosome CDS730672 684 + 0.358187
dnaE M28_Spy0962 DNA polymerase III alpha subunitSubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7; chromosome CDS979891 3111 - 0.377692
dnaG M28_Spy0578 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS599389 1815 + 0.385675
dnaI M28_Spy0278 primosomal proteinSubName: Full=Primosomal protein; chromosome CDS298705 903 + 0.413068
dnaN M28_Spy0002 DNA polymerase III, beta chainRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1712 1137 + 0.333333
dnaQ M28_Spy1570 DNA polymerase III, epsilon chainSubName: Full=DNA polymerase III, epsilon chain; EC=2.7.7.7; chromosome CDS1569659 627 - 0.395534
dnaX M28_Spy0320 DNA polymerase III, delta' subunitSubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; chromosome CDS338557 876 + 0.394977
exoA M28_Spy0327 exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; chromosome CDS342950 912 - 0.421053
fpg M28_Spy0396 formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS403570 828 + 0.429952
gyrA M28_Spy0848 DNA gyrase subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS867726 2487 + 0.400483
gyrB M28_Spy0532 DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS540307 1953 + 0.398874
holB M28_Spy1867 replicative DNA helicaseSubName: Full=Replicative DNA helicase; EC=3.6.1.-; chromosome CDS1859234 1377 - 0.390704
lig M28_Spy0551 NAD-dependent DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS570104 1959 + 0.404798
mutL M28_Spy1788 DNA mismatch repair proteinRecName: Full=DNA mismatch repair protein MutL; chromosome CDS1805210 2022 - 0.391691
mutS M28_Spy1814 DNA mismatch repair proteinRecName: Full=DNA mismatch repair protein MutS; chromosome CDS1821648 2556 - 0.402973
mutS2 M28_Spy1549 DNA mismatch repair proteinRecName: Full=Endonuclease MutS2; EC=3.1.-.-; chromosome CDS1546588 2457 - 0.367114
mutT M28_Spy1180 mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase)SubName: Full=Mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase); EC=3.6.1.-; chromosome CDS1187204 456 + 0.392544
mutY M28_Spy1544 A/G-specific adenine DNA glycosylaseSubName: Full=A/G-specific adenine DNA glycosylase; EC=3.2.2.-; chromosome CDS1543819 1155 + 0.385281
nth M28_Spy0710 endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS731352 657 + 0.392694
parC M28_Spy0692 topoisomerase IV subunit ARecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS713550 2466 + 0.402271
parE M28_Spy0691 topoisomerase IV subunit BRecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome CDS711513 1953 + 0.414747
pcrA M28_Spy0949 DNA helicase IISubName: Full=DNA helicase II; EC=3.6.1.-; chromosome CDS964661 2319 - 0.410953
phr M28_Spy1175 deoxyribodipyrimidine photolyaseSubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; chromosome CDS1181161 1434 - 0.37378
polA M28_Spy0157 DNA polymerase IRecName: Full=DNA polymerase; EC=2.7.7.7; chromosome CDS176969 2643 + 0.424139
polC M28_Spy1660 DNA polymerase III alpha subunitRecName: Full=DNA polymerase III PolC-type; Short=PolIII; EC=2.7.7.7; chromosome CDS1655518 4398 - 0.438381
priA M28_Spy1380 primosomal protein N'SubName: Full=Primosomal protein N; chromosome CDS1375295 2412 - 0.388889
radC M28_Spy0816 DNA repair proteinRecName: Full=UPF0758 protein M28_Spy0816; chromosome CDS836772 681 + 0.323054
recA M28_Spy1783 RecARecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1800246 1137 - 0.405453
recD M28_Spy1554 exodeoxyribonuclease V alpha chainSubName: Full=Exodeoxyribonuclease V alpha chain; EC=3.1.11.5; chromosome CDS1551653 2364 + 0.415398
recF M28_Spy1888 DNA replication and repair protein recFRecName: Full=DNA replication and repair protein RecF; chromosome CDS1882035 1107 + 0.37308
recG M28_Spy1509 ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; chromosome CDS1501345 2016 - 0.369544
recJ M28_Spy0707 single-stranded-DNA-specific exonucleaseSubName: Full=Single-stranded-DNA-specific exonuclease; EC=3.1.-.-; chromosome CDS727713 2211 + 0.420172
recN M28_Spy1167 DNA repair proteinRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS1172709 1665 - 0.395195
recO M28_Spy0019 DNA repair proteinRecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS33440 756 + 0.313492
recR M28_Spy1153 recombination proteinRecName: Full=Recombination protein RecR; chromosome CDS1160742 597 - 0.410385
rexA M28_Spy0574 ATP-dependent nuclease subunit ARecName: Full=ATP-dependent helicase/nuclease subunit A; EC=3.1.-.-; EC=3.6.4.12; AltName: Full=ATP-dependent helicase/nuclease AddA; chromosome CDS593832 3669 + 0.362224
rexB M28_Spy0573 ATP-dependent nuclease subunit BRecName: Full=ATP-dependent helicase/deoxyribonuclease subunit B; EC=3.1.-.-; EC=3.6.4.12; AltName: Full=ATP-dependent helicase/nuclease RexB; chromosome CDS590656 3216 + 0.34857
ruvA M28_Spy1786 holliday junction DNA helicaseRecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1803381 597 - 0.39866
ruvB M28_Spy0035 holliday junction DNA helicaseRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS53819 1071 + 0.393091
sfbX M28_Spy1715 fibronectin-binding proteinSubName: Full=Fibronectin-binding protein; chromosome CDS1724588 1950 - 0.455897
smf M28_Spy0858 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS876603 837 + 0.391876
snf M28_Spy0280 phage-related DNA helicaseSubName: Full=Phage-related DNA helicase; chromosome CDS301187 3099 + 0.363343
ssb M28_Spy0100 single-strand DNA binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS111783 396 + 0.388889
ssb2.1 M28_Spy1268 phage single-strand DNA binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS1260412 420 - 0.419048
ssb2.2 M28_Spy1541 phage single-strand DNA binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS1542382 492 - 0.428862
tag M28_Spy1785 DNA-3-methyladenine glycosylaseSubName: Full=DNA-3-methyladenine glycosylase; EC=3.2.2.20; chromosome CDS1802811 570 - 0.391228
tatD M28_Spy0214 sec-independent protein translocase proteinSubName: Full=Sec-independent protein translocase protein; EC=3.1.21.-; chromosome CDS228862 888 + 0.429054
trcF M28_Spy0006 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS5207 3504 + 0.356735
ung M28_Spy0688 uracil-DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS708637 654 + 0.420489
uvrA M28_Spy1537 excinuclease ABC subunit ARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS1537081 2859 - 0.426023
uvrB M28_Spy1056 excinuclease ABC subunit BRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS1058238 1992 - 0.394076
uvrC M28_Spy0765 excinuclease ABC subunit CRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS792230 1797 + 0.372844
xerD M28_Spy0885 recombinaseRecName: Full=Tyrosine recombinase XerS; chromosome CDS901549 1107 - 0.373984
xseB M28_Spy1171 exodeoxyribonuclease VII small subunitRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS1176541 216 - 0.347222