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2024-06-02 02:17:44

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome

Number of genes found: 116

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pasteurella multocida subsp. multocida str. Pm70, PM70
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
PM0017 unknownSubName: Full=Uncharacterized protein; chromosome CDS13833 765 - 0.356863
PM0082 unknownRecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; chromosome CDS109062 597 - 0.378559
PM0234 unknownSubName: Full=Uncharacterized protein; chromosome CDS262335 2127 - 0.369064
PM0257 unknownSubName: Full=Uncharacterized protein; chromosome CDS288699 1338 + 0.437967
PM0311 unknownRecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; chromosome CDS364764 981 + 0.432212
PM0466 unknownSubName: Full=Uncharacterized protein; chromosome CDS549103 1563 + 0.384517
PM0647 unknownRecName: Full=UPF0102 protein PM0647; chromosome CDS750986 360 + 0.408333
PM0691 unknownSubName: Full=Uncharacterized protein; chromosome CDS801144 804 - 0.395522
PM0696 unknownSubName: Full=Uncharacterized protein; chromosome CDS807167 3270 + 0.330275
PM0698 unknownSubName: Full=Uncharacterized protein; chromosome CDS811164 1911 + 0.348509
PM0751 unknownSubName: Full=Uncharacterized protein; chromosome CDS884357 627 - 0.409888
PM0881 unknownSubName: Full=Uncharacterized protein; chromosome CDS1036657 483 + 0.42236
PM0942 unknownSubName: Full=Uncharacterized protein; chromosome CDS1113327 792 - 0.405303
PM0990 unknownSubName: Full=Uncharacterized protein; chromosome CDS1161290 555 + 0.344144
PM1020 unknownSubName: Full=Uncharacterized protein; chromosome CDS1203107 609 - 0.436782
PM1084 unknownSubName: Full=Uncharacterized protein; chromosome CDS1276875 1287 - 0.280497
PM1126 unknownRecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; chromosome CDS1323045 1032 - 0.38469
PM1196 unknownSubName: Full=Uncharacterized protein; chromosome CDS1391204 255 + 0.458824
PM1269 unknownSubName: Full=Uncharacterized protein; chromosome CDS1462020 558 + 0.435484
PM1303 unknownRecName: Full=3-deoxy-D-manno-octulosonic acid kinase; Short=Kdo kinase; EC=2.7.1.166; chromosome CDS1498243 723 + 0.391425
PM1468 unknownSubName: Full=Uncharacterized protein; chromosome CDS1658315 2022 - 0.416914
PM1516 unknownRecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; chromosome CDS1714712 603 - 0.41791
PM1539 unknownSubName: Full=Uncharacterized protein; chromosome CDS1739179 1566 + 0.303321
PM1544 unknownSubName: Full=Uncharacterized protein; chromosome CDS1747980 552 - 0.422101
PM1603 unknownSubName: Full=Uncharacterized protein; chromosome CDS1815252 828 - 0.2657
PM1604 unknownSubName: Full=Uncharacterized protein; chromosome CDS1816100 453 - 0.430464
PM1665 unknownSubName: Full=Uncharacterized protein; chromosome CDS1873933 348 + 0.359195
PM1675 unknownSubName: Full=Uncharacterized protein; chromosome CDS1882042 783 + 0.40613
PM1735 unknownRecName: Full=NADH pyrophosphatase; EC=3.6.1.22; chromosome CDS1951291 795 - 0.437736
PM1750 unknownSubName: Full=Uncharacterized protein; chromosome CDS1972519 738 - 0.357724
PM1777 unknownSubName: Full=Uncharacterized protein; chromosome CDS2002059 429 + 0.375291
PM1782 unknownSubName: Full=Uncharacterized protein; chromosome CDS2004283 2178 + 0.421947
PM1826 unknownSubName: Full=Uncharacterized protein; chromosome CDS2062289 732 + 0.446721
PM1827 unknownSubName: Full=Uncharacterized protein; chromosome CDS2063024 483 + 0.428571
PM1870 unknownRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS2111671 423 + 0.451537
PM1937 unknownSubName: Full=Uncharacterized protein; chromosome CDS2173746 546 + 0.419414
PM1948 unknownSubName: Full=Uncharacterized protein; chromosome CDS2183797 1521 - 0.320184
PM1949 unknownSubName: Full=Uncharacterized protein; chromosome CDS2185304 1287 - 0.291375
dam DamSubName: Full=Dam; chromosome CDS1413778 906 - 0.383002
dat1 Dat1RecName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; AltName: Full=6-O-methylguanine-DNA methyltransferase; AltName: Full=O-6-methylguanine-DNA-alkyltransferase; chromosome CDS1258461 543 - 0.45488
deaD DeaDRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS1306862 1833 - 0.419531
dinP DinPRecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS550753 1068 + 0.40824
dnaA DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS1357003 1356 - 0.397493
dnaB DnaBRecName: Full=Replicative DNA helicase; EC=3.6.4.12; chromosome CDS482890 1404 + 0.413818
dnaE DnaERecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; chromosome CDS31764 3480 + 0.430172
dnaG DnaGRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS1430751 1749 + 0.412807
dnaN DnaNRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1355889 1101 - 0.40327
dnaQ DnaQRecName: Full=DNA polymerase III subunit epsilon; EC=2.7.7.7; chromosome CDS132010 762 - 0.433071
dnaX DnaXSubName: Full=DnaX; chromosome CDS425593 2145 + 0.421445
dnt DntSubName: Full=Dnt; chromosome CDS827709 1944 - 0.421811
dprA DprASubName: Full=DprA; chromosome CDS1809760 1122 + 0.433155
fis FisRecName: Full=DNA-binding protein Fis; chromosome CDS1282342 300 - 0.363333
fpg FpgRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS1344583 813 - 0.396064
gyrA GyrARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS991233 2700 + 0.435926
gyrB GyrBRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS1668610 2421 - 0.417596
hepA HepARecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; chromosome CDS2074391 2904 - 0.440427
himA HimARecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; chromosome CDS730350 297 - 0.387205
himD HimDRecName: Full=Integration host factor subunit beta; Short=IHF-beta; chromosome CDS943563 285 - 0.385965
holA HolASubName: Full=HolA; chromosome CDS1408217 1080 + 0.399074
holB HolBSubName: Full=HolB; chromosome CDS1881055 984 + 0.423781
holC HolCSubName: Full=HolC; chromosome CDS972357 429 - 0.428904
hold HoldRecName: Full=DNA polymerase III subunit psi; chromosome CDS1131801 411 + 0.416058
hrpA HrpASubName: Full=HrpA; chromosome CDS906161 3915 - 0.413538
hupA HupARecName: Full=DNA-binding protein HU; chromosome CDS1949201 273 - 0.417582
lig LigRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS1923922 2022 - 0.446093
mfd MfdRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1225036 3438 - 0.426411
mutH MutHRecName: Full=DNA mismatch repair protein MutH; AltName: Full=Methyl-directed mismatch repair protein; chromosome CDS1257783 669 - 0.463378
mutL MutLRecName: Full=DNA mismatch repair protein MutL; chromosome CDS1061860 1854 + 0.423409
mutS MutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS2066576 2583 + 0.473093
mutT MutTSubName: Full=MutT; chromosome CDS1409757 402 - 0.41791
mutY MutYSubName: Full=MutY; chromosome CDS1511105 1137 + 0.430959
nth NthRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS450056 633 - 0.417062
ntpA NtpASubName: Full=NtpA; chromosome CDS1151294 519 - 0.38921
parC ParCRecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS431181 2253 - 0.436307
parE ParERecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome CDS433699 1899 - 0.442865
polA PolASubName: Full=PolA; chromosome CDS1254143 2793 + 0.430004
priA PriASubName: Full=PriA; chromosome CDS1336037 2214 - 0.426378
priB PriBRecName: Full=Primosomal replication protein n; chromosome CDS1373769 327 - 0.385321
radC RadCRecName: Full=UPF0758 protein PM1152; chromosome CDS1349853 675 - 0.37037
rdgC RdgCRecName: Full=Recombination-associated protein RdgC; chromosome CDS121255 909 + 0.382838
recA RecARecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS2047013 1065 - 0.434742
recB RecBSubName: Full=RecB; chromosome CDS589977 3693 + 0.414568
recC RecCSubName: Full=RecC; chromosome CDS1132693 3375 - 0.40237
recD RecDSubName: Full=RecD; chromosome CDS593669 1974 + 0.413374
recF RecFRecName: Full=DNA replication and repair protein RecF; chromosome CDS1354795 1077 - 0.409471
recG RecGRecName: Full=ATP-dependent DNA helicase RecG; EC=3.6.4.12; chromosome CDS1083539 2082 - 0.428915
recJ RecJSubName: Full=RecJ; chromosome CDS214795 1722 + 0.440186
recN RecNRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS385501 1677 - 0.412045
recO RecORecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS2109465 711 - 0.420534
recQ RecQRecName: Full=ATP-dependent DNA helicase RecQ; EC=3.6.4.12; chromosome CDS1610870 1899 + 0.421274
recR RecRRecName: Full=Recombination protein RecR; chromosome CDS231254 603 + 0.431177
rep RepSubName: Full=Rep; chromosome CDS1246831 2016 - 0.409226
rhlB RhlBRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS2160520 1272 + 0.430818
rnh RnhRecName: Full=Ribonuclease HI; Short=RNase HI; EC=3.1.26.4; chromosome CDS132840 465 + 0.417204
rnhB RnhBRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS2239228 594 + 0.446128
rnt RntRecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; Short=RNase T; chromosome CDS1159095 663 + 0.417798
ruvA RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1148739 615 - 0.401626
ruvB RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS1147713 1008 - 0.414683
ruvC RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS1149417 573 - 0.424084
sbcB SbcBRecName: Full=Exodeoxyribonuclease I; EC=3.1.11.1; chromosome CDS712101 1428 + 0.381653
seqA SeqARecName: Full=Negative modulator of initiation of replication; chromosome CDS415664 621 + 0.412238
slpA SlpASubName: Full=SlpA; chromosome CDS1994906 1254 + 0.41866
srmB SrmBRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS2079149 1329 + 0.442438
ssb SsbRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS2186734 501 - 0.483034
tagI TagISubName: Full=TagI; chromosome CDS1813399 552 - 0.405797
topA TopARecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; AltName: Full=Omega-protein; AltName: Full=Relaxing enzyme; AltName: Full=Swivelase; AltName: Full=Untwisting enzyme; chromosome CDS715517 2607 - 0.413502
topB TopBRecName: Full=DNA topoisomerase 3; EC=5.99.1.2; AltName: Full=DNA topoisomerase III; chromosome CDS231866 1953 + 0.426523
ung UngRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS92029 669 + 0.423019
uvrA UvrARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS2187406 2832 + 0.424435
uvrB UvrBRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS503443 2037 + 0.410407
uvrC UvrCRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS1008201 1836 - 0.410131
uvrD UvrDSubName: Full=UvrD; chromosome CDS480549 2181 + 0.423659
xerC XerCRecName: Full=Tyrosine recombinase XerC; chromosome CDS1907534 888 - 0.412162
xerD XerDRecName: Full=Tyrosine recombinase XerD; chromosome CDS118281 894 - 0.402685
xseA XseARecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS193886 1338 + 0.434978
xseB XseBRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS611313 246 - 0.386179