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2024-06-10 20:48:21

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome II

Number of genes found: 41

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio fischeri ES114, ES114
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA VFA0571 DNA integration/recombination/invertion proteinSubName: Full=DNA integration/recombination/invertion protein; chromosome II CDS656958 915 - 0.35082
NA VFA0515 transposaseSubName: Full=Conserved prophage protein; chromosome II CDS591461 654 + 0.302752
NA VFA1157 ATP-dependent DNA helicase RecQ chromosome II CDS1300510 819 + 0.365079
NA VFA1129 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS1268456 11415 - 0.39378
NA VFA0663 integrase/recombinase (XerC/CodV family)SubName: Full=Integrase/recombinase (XerC/CodV family); chromosome II CDS735545 984 + 0.380081
NA VFA0395 hypothetical proteinSubName: Full=Conserved protein with nucleoside triphosphate hydrolase domain; chromosome II CDS447464 1635 - 0.382875
NA VFA0512 hypothetical proteinSubName: Full=Phage integrase family protein; chromosome II CDS589427 306 + 0.395425
NA VFA0132 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS147807 237 + 0.375527
NA VFA0603 hypothetical cytosolic proteinSubName: Full=Predicted endonuclease; chromosome II CDS684925 285 - 0.329825
NA VFA0401 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS455948 1470 - 0.396599
NA VFA0177 O6-methylguanine-DNA methyltransferaseRecName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; AltName: Full=6-O-methylguanine-DNA methyltransferase; AltName: Full=O-6-methylguanine-DNA-alkyltransferase; chromosome II CDS199764 474 + 0.388186
NA VFA0846 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS955271 1191 + 0.36272
NA VFA0016 DNA polymerase III epsilon subunit (3'-5' exonuclease)SubName: Full=DNA polymerase III, epsilon-subunit paralog (3 to 5 exonuclease); chromosome II CDS17141 639 + 0.381847
NA VFA0408 phosphohydrolase (MutT/nudix family protein)SubName: Full=Phosphohydrolase (MutT/nudix family protein); chromosome II CDS463202 528 + 0.352273
NA VFA0151 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome II CDS166800 1503 + 0.407851
NA VFA0513 DNA integration/recombination/invertion proteinSubName: Full=DNA integration/recombination/invertion protein; chromosome II CDS589765 183 + 0.404372
NA VFA0349 DNA polymerase III, epsilon chainSubName: Full=DNA polymerase III, epsilon-subunit paralog (3 to 5 exonuclease); EC=2.7.7.7; chromosome II CDS390260 780 - 0.373077
NA VFA0522 DNA repair protein RadCSubName: Full=DNA repair protein RadC; chromosome II CDS597399 474 - 0.417722
NA VFA0384 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome II CDS434633 1905 + 0.450919
NA VFA0127 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS143893 486 + 0.372428
NA VFA0126 DNA-3-methyladenine glycosylaseSubName: Full=DNA-3-methyladenine glycosylase; EC=3.2.2.20; chromosome II CDS142995 708 - 0.416667
NA VFA0815 DNA-3-methyladenine glycosylaseSubName: Full=3-methyl-adenine DNA glycosylase I, constitutive; EC=3.2.2.20; chromosome II CDS921220 570 - 0.333333
NA VFA0524 ribonuclease HSubName: Full=Ribonuclease H; EC=3.1.26.4; chromosome II CDS598303 447 + 0.427293
NA VFA0581 RstASubName: Full=RstA2 protein; chromosome II CDS663940 1155 - 0.374892
NA VFA0542 superfamily I DNA helicases and helicase subunitsSubName: Full=Superfamily I DNA helicase and helicase subunits; chromosome II CDS623184 4065 + 0.407134
NA VFA1102 hypothetical proteinSubName: Full=Site-specific recombinase, phage integrase family; chromosome II CDS1245217 804 - 0.35199
NA VFA0135 DNA helicase IISubName: Full=DNA helicase II; EC=3.6.1.-; chromosome II CDS148697 1863 - 0.340848
NA VFA0374 ATP-dependent RNA helicaseSubName: Full=ATP-dependent RNA helicase; chromosome II CDS422266 1305 + 0.384674
NA VFA0871 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS984628 480 - 0.25625
NA VFA1158 hypothetical cytosolic proteinSubName: Full=Hypothetical cytosolic protein; chromosome II CDS1301438 1641 + 0.388178
NA VFA0460 transcription-repair coupling factor chromosome II CDS529000 1902 - 0.423239
NA VFA0753 deoxyribodipyrimidine photolyaseSubName: Full=Deoxyribodipyrimidine photolyase Phr, FAD-binding; EC=4.1.99.3; chromosome II CDS850670 1440 + 0.376389
NA VFA1156 ATP-dependent DNA helicase RecQ chromosome II CDS1299094 1395 + 0.377778
NA VFA0548 DNA integration/recombination/invertion proteinSubName: Full=Phage family integrase; chromosome II CDS631210 1200 - 0.385
NA VFA0553 ATP-dependent RNA helicaseSubName: Full=ATP-dependent RNA helicase; chromosome II CDS637578 1383 + 0.388286
NA VFA0154 ATP-dependent RNA helicase DbpASubName: Full=ATP-dependent RNA helicase, specific for 23S rRNA; chromosome II CDS171550 1389 - 0.403888
NA VFA0459 transcription-repair coupling factor chromosome II CDS527447 1599 - 0.409006
NA VFA0652 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS726046 1026 + 0.304094
NA VFA0543 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS627245 504 + 0.373016
NA VFA0501 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS577419 438 - 0.385845
NA VFA0625 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome II CDS704646 450 - 0.337778