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2024-06-02 04:45:20

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome

Number of genes found: 118

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Streptococcus pyogenes M1 GAS, SF370
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SPy1336 putative transposase-IS861 associatedSubName: Full=Putative transposase-IS861 associated; chromosome CDS1107323 807 + 0.400248
NA SPy0195 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS179046 294 - 0.37415
NA SPy0198 putative transposase, IS861SubName: Full=Putative transposase, IS861; SubName: Full=Transposase; chromosome CDS182123 807 - 0.395291
NA SPy0971 putative terminase, small subunit-phage associatedSubName: Full=Putative terminase, small subunit-phage associated; chromosome CDS794673 483 + 0.393375
NA SPy0444 conserved hypothetical proteinSubName: Full=Phosphohydrolase; SubName: Full=Uncharacterized protein; chromosome CDS368571 555 + 0.407207
NA SPy1574 putative transposase-IS1548SubName: Full=Putative transposase-IS1548; chromosome CDS1296969 1134 + 0.381834
NA SPy0948 conserved hypothetical protein-phage associatedSubName: Full=Uncharacterized protein; chromosome CDS784595 807 - 0.369269
NA SPy1563 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1285211 675 - 0.398519
NA SPy1477 putative recombinase-phage associatedSubName: Full=Putative recombinase-phage associated; chromosome CDS1215998 990 - 0.39899
NA SPy1992 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1662171 1269 + 0.43026
NA SPy0669 putative DEAD box family helicase, phage associatedSubName: Full=Putative DEAD box family helicase, phage associated; chromosome CDS537571 1584 + 0.410985
NA SPy0199 conserved hypothetical protein, IS861 associatedSubName: Full=Uncharacterized protein; chromosome CDS182950 516 - 0.366279
NA SPy1644 conserved hypothetical proteinSubName: Full=Methyltransferase; EC=2.1.1.-; SubName: Full=Uncharacterized protein; chromosome CDS1363963 1155 - 0.393939
NA SPy1047 hypothetical proteinRecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; chromosome CDS858863 870 + 0.355172
NA SPy0133 conserved hypothetical proteinSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS123814 351 - 0.407407
NA SPy1830 putative single strand binding protein-phage associated ?RecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS1519100 492 - 0.426829
NA SPy0303 putative transposase, IS1548SubName: Full=Putative transposase, IS1548; chromosome CDS270848 1134 + 0.382716
NA SPy0679 conserved hypothetical protein, phage associatedSubName: Full=Uncharacterized protein; chromosome CDS545087 1167 + 0.372751
NA SPy1844 putative exodeoxyribonuclease V (alpha subunit)SubName: Full=Exodeoxyribonuclease V alpha chain; EC=3.1.11.5; SubName: Full=Putative exodeoxyribonuclease V (Alpha subunit); chromosome CDS1528370 2454 + 0.41524
NA SPy0732 conserved hypothetical proteinSubName: Full=Transposase; SubName: Full=Uncharacterized protein; chromosome CDS588374 591 - 0.402707
NA SPy1054 putative collagen-like protein chromosome CDS863979 882 + 0.469388
NA SPy0928 conserved hypothetical proteinSubName: Full=DNA replication protein; SubName: Full=Uncharacterized protein; chromosome CDS771726 684 + 0.355263
NA SPy1564 conserved hypothetical proteinSubName: Full=Putative cytosolic protein; SubName: Full=Uncharacterized protein; chromosome CDS1285887 849 - 0.380448
NA SPy2170 hypothetical proteinSubName: Full=Phosphohydrolase; SubName: Full=Uncharacterized protein; chromosome CDS1805181 642 - 0.389408
NA SPy1841 putative ribonuclease HIIIRecName: Full=Ribonuclease HIII; Short=RNase HIII; EC=3.1.26.4; chromosome CDS1526806 903 + 0.369878
NA SPy1160 hypothetical proteinSubName: Full=Putative cytosolic protein; SubName: Full=Uncharacterized protein; chromosome CDS953429 441 - 0.376417
NA SPy1196 putative integrase/recombinaseRecName: Full=Tyrosine recombinase XerS; chromosome CDS980732 1071 - 0.379085
NA SPy1562 conserved hypothetical proteinRecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; chromosome CDS1284189 1026 - 0.380117
NA SPy1561 conserved hypothetical proteinRecName: Full=CRISPR-associated endoribonuclease Cas2; EC=3.1.-.-; chromosome CDS1283885 294 - 0.391156
NA SPy2113 conserved hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS1764930 420 - 0.37619
NA SPy1412 conserved hypothetical proteinRecName: Full=UPF0213 protein SPy_1412/M5005_Spy1151; chromosome CDS1171471 279 + 0.362007
NA SPy2186 hypothetical proteinSubName: Full=Phosphohydrolase; SubName: Full=Uncharacterized protein; chromosome CDS1820109 318 - 0.349057
NA SPy2180 putative transposaseSubName: Full=Putative transposase; chromosome CDS1812120 1134 - 0.381834
NA SPy0108 conserved hypothetical proteinSubName: Full=Adenine-specific methyltransferase; EC=2.1.1.72; SubName: Full=Uncharacterized protein; chromosome CDS105209 954 + 0.383648
NA SPy1077 putative methyl transferaseSubName: Full=DNA-cytosine methyltransferase; SubName: Full=Putative methyl transferase; chromosome CDS884567 324 + 0.41358
NA SPy1807 putative transposase-IS1548SubName: Full=Putative transposase-IS1548; SubName: Full=Transposase; chromosome CDS1499197 1134 - 0.380952
NA SPy2013 transposase-IS1562SubName: Full=Transposase; SubName: Full=Transposase-IS1562; chromosome CDS1680888 1206 + 0.440298
NA SPy0021 conserved hypothetical proteinRecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS33143 756 + 0.313492
NA SPy2145 hypothetical protein-phage associatedSubName: Full=Uncharacterized protein; chromosome CDS1785275 384 + 0.377604
NA SPy1538 conserved hypothetical proteinSubName: Full=Methyltransferase; EC=2.1.1.-; SubName: Full=Uncharacterized protein; chromosome CDS1265912 540 - 0.37963
NA SPy0260 conserved hypothetical proteinSubName: Full=Sec-independent protein translocase protein; EC=3.1.21.-; SubName: Full=Uncharacterized protein; chromosome CDS224791 825 + 0.425455
NA SPy0550 hypothetical protein chromosome CDS448362 315 + 0.380952
NA SPy0261 conserved hypothetical proteinRecName: Full=Ribonuclease M5; EC=3.1.26.8; AltName: Full=RNase M5; AltName: Full=Ribosomal RNA terminal maturase M5; chromosome CDS225608 570 + 0.44386
NA SPy0339 hypothetical proteinSubName: Full=Replicative DNA helicase; EC=3.6.1.-; SubName: Full=Uncharacterized protein; chromosome CDS294722 1176 + 0.370748
NA SPy0130 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS121417 648 + 0.317901
NA SPy0131 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS122251 1353 - 0.423503
NA SPy0472 conserved hypothetical proteinSubName: Full=Uncharacterized protein; SubName: Full=Uracil DNA glycosylase superfamily protein; chromosome CDS387581 576 + 0.421875
NA SPy1659 putative ATP-dependent RNA helicaseSubName: Full=ATP-dependent RNA helicase; SubName: Full=Putative ATP-dependent RNA helicase; chromosome CDS1378395 1344 - 0.419643
NA SPy0365 hypothetical protein (possible integrase/recombinase)RecName: Full=Tyrosine recombinase XerD-like; chromosome CDS315251 747 + 0.327979
NA SPy1335 conserved hypothetical protein-transposon IS861 associatedSubName: Full=Uncharacterized protein; chromosome CDS1106787 516 + 0.366279
NA SPy0671 hypothetical protein, phage associatedSubName: Full=Uncharacterized protein; chromosome CDS539783 2274 + 0.394899
NA SPy0400 putative DNA polymerase III delta' subunitSubName: Full=Putative DNA polymerase III delta subunit; chromosome CDS337062 876 + 0.391553
NA SPy0673 conserved hypothetical protein, phage associatedSubName: Full=Uncharacterized protein; chromosome CDS542545 396 + 0.419192
NA SPy0683 putative minor capsid protein, phage associatedSubName: Full=Putative minor capsid protein, phage associated; chromosome CDS549887 1494 + 0.395582
NA SPy0477 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS390236 477 + 0.412998
comEA SPy1409 putative competence proteinSubName: Full=COME operon protein 1; SubName: Full=Putative competence protein; chromosome CDS1168985 663 - 0.374057
comFA SPy1616 putative late competence protein required for DNA uptakeSubName: Full=Putative late competence protein required for DNA uptake; chromosome CDS1338335 1326 - 0.362745
deaD SPy1415 putative ATP-dependent RNA helicaseSubName: Full=ATP-dependent RNA helicase; SubName: Full=Putative ATP-dependent RNA helicase; chromosome CDS1173901 1620 - 0.418519
deaD2 SPy1369 putative RNA helicaseSubName: Full=Putative RNA helicase; chromosome CDS1135100 1086 + 0.388582
dinG SPy0649 putative ATP-dependent DNA helicaseSubName: Full=Putative ATP-dependent DNA helicase; chromosome CDS520872 2502 + 0.381295
dinP SPy1846 putative DNA-damage-inducible protein PRecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS1531489 1095 - 0.415525
dnaA SPy0002 Chromosomal initiator proteinRecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS232 1356 + 0.334071
dnaE SPy1284 putative DNA polymerase III (alpha subunit)RecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; chromosome CDS1059037 3111 - 0.376728
dnaG SPy0781 putative DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS640206 1815 + 0.385675
dnaI SPy0340 putative primosome component (helicase loader)SubName: Full=Primosomal protein; SubName: Full=Putative primosome component (Helicase loader); chromosome CDS295898 903 + 0.414175
dnaN SPy0003 beta subunit of DNA polymerase IIIRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1742 1137 + 0.331574
dnaQ SPy1864 putative DNA polymerase III epsilon subunitSubName: Full=Putative DNA polymerase III epsilon subunit; chromosome CDS1546470 627 - 0.395534
dnaX SPy1364 DNA polymerase III subunits gamma / tauSubName: Full=DNA polymerase III subunit gamma/tau; EC=2.7.7.7; SubName: Full=DNA polymerase III subunits gamma / tau; chromosome CDS1130859 1671 - 0.405745
exoA SPy0412 putative 3'-exo-deoxyribonucleaseSubName: Full=Putative 3-exo-deoxyribonuclease; EC=3.1.11.-; chromosome CDS341615 828 - 0.427536
fpg SPy0497 putative formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS398928 828 + 0.423913
gyrA SPy1152 DNA gyrase A subunitRecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS946971 2487 + 0.40008
gyrB SPy0727 putative DNA gyrase, subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS581680 1953 + 0.399386
hlpA SPy1489 histone-like DNA-binding proteinRecName: Full=DNA-binding protein HU; chromosome CDS1222637 276 - 0.405797
holA SPy1407 DNA polymerase III delta subunitSubName: Full=DNA polymerase III delta subunit; SubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; chromosome CDS1165650 1041 - 0.367915
holB SPy2182 DNA polymerase III delta prime subunitSubName: Full=DNA polymerase III delta prime subunit; chromosome CDS1814174 1368 - 0.390351
int1 SPy0655 putative integrase; bacteriophage 370.1SubName: Full=Putative integrase bacteriophage 370.1; chromosome CDS529631 1416 - 0.321328
int2 SPy1488 putative integrase-phage associatedSubName: Full=Integrase; SubName: Full=Putative integrase-phage associated; chromosome CDS1221407 1143 + 0.356955
int3 SPy0937 putative integrase-phage associated chromosome CDS778642 1140 - 0.389474
int4 SPy2122 putative integrase-phage associatedSubName: Full=Putative integrase-phage associated; chromosome CDS1773458 1146 - 0.359511
lig SPy0751 putative DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS611246 1959 + 0.405309
mutL SPy2121 putative DNA mismatch repair proteinRecName: Full=DNA mismatch repair protein MutL; chromosome CDS1771381 1983 - 0.395865
mutS SPy2148 putative DNA mismatch repair proteinRecName: Full=DNA mismatch repair protein MutS; chromosome CDS1787021 2556 - 0.402582
mutS2 SPy1837 putative DNA mismatch repair proteinRecName: Full=Endonuclease MutS2; EC=3.1.-.-; chromosome CDS1523305 2340 - 0.367949
mutT SPy1510 putative mutator proteinSubName: Full=Mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase); EC=3.6.1.-; SubName: Full=Putative mutator protein; chromosome CDS1241086 456 + 0.392544
mutX SPy1010 putative 7,8-dihydro-8-oxoguanine-triphosphataseSubName: Full=Mutator mutT protein/7,8-dihydro-8-oxoguanine-triphosphatase; EC=3.6.1.-; SubName: Full=Putative 7,8-dihydro-8-oxoguanine-triphosphatase; chromosome CDS821203 477 + 0.392034
mutY SPy1833 putative A/G-specific adenine glycosylaseSubName: Full=Putative A/G-specific adenine glycosylase; chromosome CDS1520567 1125 + 0.385778
nth SPy0929 putative endonuclease III (DNA repair)RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS772406 657 + 0.400304
parC SPy0910 putative DNA topoisomerase IV (subunit C)RecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS754392 2460 + 0.402439
parE SPy0909 putative DNA topoisomerase IV (subunit B)RecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome CDS752349 1953 + 0.416795
pcrA SPy1267 putative ATP-dependent DNA helicaseSubName: Full=DNA helicase II; EC=3.6.1.-; SubName: Full=Putative ATP-dependent DNA helicase; chromosome CDS1043809 2319 - 0.410953
phr SPy1505 putative deoxyribodipyrimidine photolyaseSubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; SubName: Full=Putative deoxyribodipyrimidine photolyase; EC=4.1.99.3; chromosome CDS1235043 1410 - 0.37234
polA SPy0185 DNA-directed DNA polymerase IRecName: Full=DNA polymerase; EC=2.7.7.7; chromosome CDS171524 2643 + 0.423383
polC SPy1961 DNA polymerase III (alpha subunit)RecName: Full=DNA polymerase III PolC-type; Short=PolIII; EC=2.7.7.7; chromosome CDS1628382 4398 - 0.434516
priA SPy1629 putative primosomal replication factor YSubName: Full=Primosomal protein N; SubName: Full=Putative primosomal replication factor Y; chromosome CDS1350681 2385 - 0.386583
radC SPy1118 putative DNA repair proteinRecName: Full=UPF0758 protein SPy_1118/M5005_Spy0840; chromosome CDS916003 681 + 0.321586
recA SPy2116 recombination proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1766417 1137 - 0.407212
recF SPy2204 RecF proteinRecName: Full=DNA replication and repair protein RecF; chromosome CDS1836947 1107 + 0.372177
recG SPy1785 putative ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; SubName: Full=Putative ATP-dependent DNA helicase; chromosome CDS1476761 2016 - 0.369544
recN SPy1495 putative DNA repair and genetic recombination proteinRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS1226591 1662 - 0.394103
recR SPy1422 putative recombination proteinRecName: Full=Recombination protein RecR; chromosome CDS1181123 597 - 0.40871
rexA SPy0777 putative ATP-dependent exonuclease, subunit ARecName: Full=ATP-dependent helicase/nuclease subunit A; EC=3.1.-.-; EC=3.6.4.12; AltName: Full=ATP-dependent helicase/nuclease AddA; chromosome CDS634684 3633 + 0.364437
rexB SPy0776 putative ATP-dependent exonuclease, subunit BRecName: Full=ATP-dependent helicase/deoxyribonuclease subunit B; EC=3.1.-.-; EC=3.6.4.12; AltName: Full=ATP-dependent helicase/nuclease RexB; chromosome CDS631472 3216 + 0.349502
rnh SPy1162 putative ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS954926 792 + 0.405303
ruvA SPy2119 putative Holiday junction DNA helicaseRecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1769552 597 - 0.39866
ruvB SPy0038 putative Holliday junction DNA helicase, subunit BRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS53843 999 + 0.396396
smf SPy1163 putative DNA processing protein (Smf family)SubName: Full=Putative DNA processing protein (Smf family); SubName: Full=Smf; chromosome CDS955782 837 + 0.391876
snf SPy0342 putative SNF helicaseSubName: Full=Putative SNF helicase; chromosome CDS298380 3099 + 0.364634
srtI SPy1080 protein involved in lantibiotic (srt) productionSubName: Full=Protein involved in lantibiotic (Srt) production; chromosome CDS885728 648 + 0.348765
tag SPy2118 putative 3-methyl-adenine DNA glycosylase I, constitutiveSubName: Full=DNA-3-methyladenine glycosylase; EC=3.2.2.20; SubName: Full=Putative 3-methyl-adenine DNA glycosylase I, constitutive; EC=3.2.2.-; chromosome CDS1768982 561 - 0.392157
tnpA SPy0565 transposase chromosome CDS455717 1038 - 0.354528
topA SPy1164 putative DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS956725 2130 + 0.381221
trcF SPy0008 putative transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS5237 3504 + 0.353881
ung SPy0905 putative uracil DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS749465 654 + 0.422018
uvrA SPy1825 putative excinuclease ABC (subunit A)RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS1513799 2829 - 0.428066
uvrB SPy1314 putative excinuclease ABC (subunit B)RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS1091221 1992 - 0.393072
uvrC SPy1068 excinuclease ABC (subunit C)RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS876670 1797 + 0.374513
xseA SPy1500 putative exodeoxyribonuclease VII (large subunit)RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS1230616 1341 - 0.423564
xseB SPy1499 exodeoxyribonuclease VII (small subunit)RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS1230423 216 - 0.347222