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2024-06-01 08:55:46

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome

Number of genes found: 106

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Synechococcus elongatus PCC 6301, PCC6301
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA syc0757_d serine/threonine kinaseSubName: Full=Serine/threonine kinase; chromosome CDS846910 1374 + 0.558952
NA syc1563_c unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS1689461 321 - 0.554517
NA syc0229_d putative helicaseSubName: Full=Putative helicase; chromosome CDS265212 2760 + 0.570652
NA syc0560_c hypothetical proteinRecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS627136 801 - 0.600499
NA syc2252_c transposaseSubName: Full=Transposase; chromosome CDS2406837 1269 - 0.540583
NA syc0428_d serine/threonine kinaseSubName: Full=Serine/threonine kinase; chromosome CDS480181 2160 + 0.593056
NA syc1356_d similar to ADA regulatory proteinSubName: Full=Similar to ADA regulatory protein; chromosome CDS1470139 558 + 0.546595
NA syc2296_c unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS2449645 534 - 0.588015
NA syc1707_d hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS1844111 450 + 0.595556
NA syc1728_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1871860 855 - 0.596491
NA syc0923_d similar to serine/threonine kinaseSubName: Full=Similar to serine/threonine kinase; chromosome CDS1030817 1533 + 0.567515
NA syc0814_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS908324 1044 - 0.594828
NA syc0249_d unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS289062 579 + 0.511226
NA syc0804_c unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS897905 2553 - 0.61888
NA syc1201_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1309219 396 + 0.590909
NA syc0806_c putative helicaseSubName: Full=Putative helicase; chromosome CDS900796 1410 - 0.605674
NA syc0688_c pseudo transposaseSubName: Full=Pseudo transposase; chromosome CDS771984 477 - 0.545073
NA syc0579_d probable methyltransferaseSubName: Full=Probable methyltransferase; chromosome CDS649167 381 + 0.603675
NA syc0298_c similar to DNA repair protein RAD32SubName: Full=Similar to DNA repair protein RAD32; chromosome CDS343971 1278 - 0.571205
NA syc1567_d DNA polymerase bacteriophage-typeSubName: Full=DNA polymerase bacteriophage-type; chromosome CDS1692337 708 + 0.59887
NA syc1369_d phage integraseSubName: Full=Phage integrase; chromosome CDS1482869 1308 + 0.594801
NA syc1262_c unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS1373004 771 - 0.57847
NA syc1857_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2009611 873 - 0.601375
NA syc1621_d unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS1750795 693 + 0.506494
NA syc0288_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS333221 873 + 0.570447
NA syc0775_c unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS866917 531 - 0.33145
NA syc2086_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2237897 2769 - 0.581437
NA syc1644_d hypothetical proteinRecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; chromosome CDS1775604 1275 + 0.441569
NA syc2466_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2628419 555 - 0.594595
NA syc2316_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2475053 954 - 0.489518
NA syc0708_d pseudo transposaseSubName: Full=Pseudo transposase; chromosome CDS794244 225 + 0.56
NA syc0085_c unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS96525 342 - 0.546784
NA syc0869_d carboxyl-terminal proteaseSubName: Full=Carboxyl-terminal protease; chromosome CDS965512 1506 + 0.602258
NA syc0227_c transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS260107 3462 - 0.585789
NA syc0666_d putative SNF2 helicaseSubName: Full=Putative SNF2 helicase; chromosome CDS743416 3060 + 0.569935
NA syc0259_c serine/threonine kinaseSubName: Full=Serine/threonine kinase; chromosome CDS300498 1686 - 0.568209
NA syc0384_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS420043 1326 - 0.580694
NA syc0438_d serine/threonine kinaseSubName: Full=Serine/threonine kinase; chromosome CDS491357 1584 + 0.584596
NA syc1947_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2088013 489 + 0.597137
NA syc1046_c hypothetical proteinRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS1161862 225 - 0.528889
NA syc0590_d unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS659186 792 + 0.532828
NA syc0393_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS431539 3186 - 0.559008
NA syc1547_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1672435 3003 - 0.602731
NA syc0410_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS454698 1758 + 0.583049
NA syc0671_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS749013 591 - 0.524535
NA syc2096_d penicillin-binding proteinSubName: Full=Penicillin-binding protein; chromosome CDS2246850 2223 + 0.595592
NA syc0345_c a part of phage_integraseSubName: Full=A part of phage_integrase; chromosome CDS386866 165 - 0.569697
NA syc0394_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS434711 2598 - 0.583526
NA syc0242_d unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS282204 375 + 0.544
NA syc2227_c similar to deoxyribodipyrimidine photolyaseSubName: Full=Similar to deoxyribodipyrimidine photolyase; chromosome CDS2379231 918 - 0.584967
NA syc0441_c DNA binding protein HUSubName: Full=DNA binding protein HU; chromosome CDS495156 276 - 0.518116
NA syc1591_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1720325 2268 + 0.584656
NA syc1828_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1977432 552 + 0.525362
dnaA syc0449_d chromosomal replication initiator protein DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS502252 1449 + 0.532091
dnaB syc0228_c replicative DNA helicaseSubName: Full=Replicative DNA helicase; chromosome CDS263649 1362 - 0.520558
dnaE syc1898_d DNA polymerase III alpha subunitSubName: Full=DNA polymerase III alpha subunit; chromosome CDS2036501 2613 + 0.476464
dnaE syc0952_d DNA polymerase III alpha subunitSubName: Full=DNA polymerase III alpha subunit; chromosome CDS1067658 1344 + 0.584077
dnaG syc0261_d DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS304780 2085 + 0.573142
dnaN syc1496_c DNA polymerase III beta subunitRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1619646 1173 - 0.570332
dnaX syc0630_c DNA polymerase III gamma and tau subunitsSubName: Full=DNA polymerase III gamma and tau subunits; chromosome CDS699524 1959 - 0.591118
fpg syc0230_c formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS268003 720 - 0.575
gyrA syc2396_c DNA gyrase A subunitSubName: Full=DNA gyrase A subunit; chromosome CDS2554544 2577 - 0.584789
gyrA syc1259_c DNA gyrase A subunitRecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS1369455 2571 - 0.585764
gyrB syc1615_c DNA gyrase B subunitRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS1743835 1938 - 0.545408
himA syc1850_d DNA binding protein HUSubName: Full=DNA binding protein HU; chromosome CDS2001301 276 + 0.507246
holA syc1111_c DNA polymerase III delta subunitSubName: Full=DNA polymerase III delta subunit; chromosome CDS1221012 999 - 0.568569
holB syc1410_c DNA polymerase III delta prime subunitSubName: Full=DNA polymerase III delta prime subunit; chromosome CDS1528271 939 - 0.582535
lig syc1236_d DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS1347351 2040 + 0.588235
mbpA syc2303_c adenine-specific DNA methylaseSubName: Full=Adenine-specific DNA methylase; chromosome CDS2455241 639 - 0.456964
mpg syc0860_c N-methylpurine-DNA glycosiraseRecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; chromosome CDS955747 600 - 0.6
mutL syc2313_c DNA mismatch repair protein MutLSubName: Full=DNA mismatch repair protein MutL; chromosome CDS2469666 1626 - 0.575646
mutS syc1851_c DNA mismatch repair protein MutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS2002070 2649 - 0.573046
mutS syc0913_c DNA mismatch repair protein MutSRecName: Full=Endonuclease MutS2; EC=3.1.-.-; chromosome CDS1018667 2391 - 0.607277
mutT syc1461_c mutator MutT proteinSubName: Full=Mutator MutT protein; chromosome CDS1583928 477 - 0.568134
mutT syc0856_c mutator MutT proteinSubName: Full=Mutator MutT protein; chromosome CDS951940 1083 - 0.5494
nth syc1071_d DNA-(apurinic or apyrimidinic site) lyaseRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS1183343 687 + 0.573508
pcrA syc2503_d ATP-dependent helicase PcrASubName: Full=ATP-dependent helicase PcrA; chromosome CDS2665852 2301 + 0.558887
pcrA syc1927_c ATP-dependent helicase PcrASubName: Full=ATP-dependent helicase PcrA; chromosome CDS2065965 2385 - 0.518658
phrA syc1392_c DNA photolyaseRecName: Full=Deoxyribodipyrimidine photo-lyase; EC=4.1.99.3; AltName: Full=DNA photolyase; AltName: Full=Photoreactivating enzyme; chromosome CDS1507742 1455 - 0.586254
polA syc1317_d DNA polymerase ISubName: Full=DNA polymerase I; chromosome CDS1425334 2895 + 0.572712
priA syc0877_c primosomal protein N'SubName: Full=Primosomal protein N; chromosome CDS973710 2421 - 0.589013
radC syc0323_d DNA repair protein RadCSubName: Full=DNA repair protein RadC; chromosome CDS371478 735 + 0.585034
recA syc1165_d recombination protein RecARecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1279114 1071 + 0.583567
recF syc1848_d DNA replication and repair protein RecFRecName: Full=DNA replication and repair protein RecF; chromosome CDS1998790 1164 + 0.57646
recG syc0470_c ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; chromosome CDS529653 2454 - 0.568052
recJ syc2209_c single-stranded DNA-specific exonucleaseSubName: Full=Single-stranded DNA-specific exonuclease; chromosome CDS2357578 1932 - 0.556418
recJ syc1003_d single-stranded DNA-specific exonucleaseSubName: Full=Single-stranded DNA-specific exonuclease; chromosome CDS1116547 2328 + 0.602663
recN syc2314_c DNA replication and repair protein RecNRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS2471365 1767 - 0.57442
recQ syc0252_c ATP-dependent DNA helicase RecQSubName: Full=ATP-dependent DNA helicase RecQ; chromosome CDS290659 1422 - 0.584388
recR syc0186_c recombination protein RecRRecName: Full=Recombination protein RecR; chromosome CDS212963 600 - 0.576667
rnhA syc1913_d ribonuclease HRecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; chromosome CDS2054689 786 + 0.576336
rnhB syc0661_c ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS733973 648 - 0.587963
ruvA syc1802_c holliday junction DNA helicase RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1947439 624 - 0.583333
ruvB syc0705_c holliday junction DNA helicase RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS790079 1128 - 0.578014
ruvC syc0740_d holliday junction resolvase RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS828066 486 + 0.58642
smf syc0827_c DNA processing proteinSubName: Full=DNA processing protein; chromosome CDS925590 1221 - 0.556102
ssb syc1211_c single-stranded DNA-binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS1320892 399 - 0.568922
tatD syc2506_d Mg-dependent DNaseSubName: Full=Mg-dependent DNase; chromosome CDS2670074 798 + 0.590226
topA syc0139_c DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS149805 2652 - 0.571267
umuC syc0008_d DNA polymerase VSubName: Full=DNA polymerase V; chromosome CDS7716 1257 + 0.53222
uvrA syc0692_d excinuclease ABC subunit ARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS775520 3012 + 0.567065
uvrB syc0959_d excinuclease ABC subunit BRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS1075225 2001 + 0.512244
uvrC syc2149_d excinuclease ABC subunit CRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS2295608 1932 + 0.539337
xseA syc1145_c exodeoxyribonuclease VII large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; chromosome CDS1258837 1335 - 0.588015
xthA syc1503_d exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; chromosome CDS1625783 798 + 0.553885
ycf41 syc1425_d hypothetical protein YCF41SubName: Full=Uncharacterized protein; chromosome CDS1543299 447 + 0.577181