TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-06-01 03:16:41

Gene list

Applied filters:

COG category: Replication, recombination and repair
Genomic element: chromosome

Number of genes found: 159

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Listeria innocua Clip11262, Clip11262
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
RecF RecF proteinRecName: Full=DNA replication and repair protein RecF; chromosome CDS4870 1113 + 0.390836
addB RecName: Full=ATP-dependent helicase/deoxyribonuclease subunit B; EC=3.1.-.-; EC=3.6.4.12; AltName: Full=ATP-dependent helicase/nuclease AddB; chromosome CDS2402319 3474 - 0.341393
codV RecName: Full=Tyrosine recombinase XerC; chromosome CDS1311106 903 + 0.365449
comEA SubName: Full=ComEA protein; chromosome CDS1522696 603 - 0.343284
comFA SubName: Full=ComFA protein; chromosome CDS2675915 1320 - 0.371212
dinG SubName: Full=DinG protein; chromosome CDS2026589 2787 - 0.372802
dnaA Chromosomal replication initiation protein DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS319 1356 + 0.375369
dnaB chromosome replication initiation / membrane attachment protein DnaBSubName: Full=Chromosome replication initiation / membrane attachment protein DnaB; chromosome CDS1602904 1377 - 0.376906
dnaC SubName: Full=DnaC protein; chromosome CDS49394 1353 + 0.419808
dnaD SubName: Full=DnaD protein; chromosome CDS2022585 720 - 0.366667
dnaE SubName: Full=DnaE protein; chromosome CDS1617970 3327 - 0.383529
dnaG DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS1493722 1881 - 0.373737
dnaI primosome component (helicase loader) DnaISubName: Full=Primosome component (Helicase loader) DnaI; chromosome CDS1601971 924 - 0.362554
dnaN DNA polymerase III, beta chainRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1868 1146 + 0.34904
dnaX SubName: Full=DnaX protein; chromosome CDS2867906 1740 - 0.420115
gyrA DNA gyrase subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS8066 2529 + 0.400949
gyrB DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS6031 1941 + 0.397218
hup SubName: Full=Hup protein; chromosome CDS2062689 276 - 0.376812
int putative integrase [Bacteriophage A118]SubName: Full=Putative integrase [Bacteriophage A118]; chromosome CDS2444533 1359 + 0.33039
lin0068 SubName: Full=Lin0068 protein; chromosome CDS73144 1053 + 0.415005
lin0071 SubName: Full=Lin0071 protein; chromosome CDS76209 1203 - 0.375727
lin0084 SubName: Full=Lin0084 protein; chromosome CDS83126 960 + 0.377083
lin0085 putative recombinase [Bacteriophage A118]SubName: Full=Putative recombinase [Bacteriophage A118]; chromosome CDS84085 816 + 0.386029
lin0086 SubName: Full=Lin0086 protein; chromosome CDS84921 912 + 0.381579
lin0088 SubName: Full=Lin0088 protein; chromosome CDS86290 813 + 0.373924
lin0097 RecName: Full=Single-stranded DNA-binding protein 2; Short=SSB 2; chromosome CDS90333 480 + 0.4125
lin0101 Protein gp66 [Bacteriophage A118]SubName: Full=Protein gp66 [Bacteriophage A118]; chromosome CDS91890 435 + 0.354023
lin0104 SubName: Full=Lin0104 protein; chromosome CDS93090 543 + 0.401473
lin0108 putative scaffolding protein [Bacteriophage A118]SubName: Full=Putative scaffolding protein [Bacteriophage A118]; chromosome CDS97933 570 + 0.392982
lin0135 SubName: Full=Lin0135 protein; chromosome CDS125683 1032 + 0.337209
lin0186 SubName: Full=Lin0186 protein; chromosome CDS176603 369 + 0.403794
lin0195 SubName: Full=Lin0195 protein; chromosome CDS184384 2340 + 0.396154
lin0205 SubName: Full=Lin0205 protein; chromosome CDS198383 993 + 0.414904
lin0209 RecName: Full=UPF0213 protein lin0209; chromosome CDS201408 273 + 0.410256
lin0224 SubName: Full=Lin0224 protein; chromosome CDS221563 774 + 0.392765
lin0226 RecName: Full=Ribonuclease M5; EC=3.1.26.8; AltName: Full=RNase M5; AltName: Full=Ribosomal RNA terminal maturase M5; chromosome CDS223947 576 + 0.409722
lin0357 SubName: Full=Lin0357 protein; chromosome CDS373203 540 + 0.431481
lin0387 RecName: Full=Uncharacterized Nudix hydrolase lin0387; EC=3.6.-.-; chromosome CDS400935 510 + 0.378431
lin0397 SubName: Full=Lin0397 protein; chromosome CDS408916 363 + 0.30854
lin0398 SubName: Full=Lin0398 protein; chromosome CDS409269 1611 + 0.350714
lin0408 RecName: Full=Uracil-DNA glycosylase 1; Short=UDG 1; EC=3.2.2.27; chromosome CDS420093 666 + 0.400901
lin0439 SubName: Full=Lin0439 protein; chromosome CDS448625 300 - 0.37
lin0510 SubName: Full=Lin0510 protein; chromosome CDS531543 588 + 0.333333
lin0524 SubName: Full=Lin0524 protein; chromosome CDS548512 930 + 0.315054
lin0580 SubName: Full=Lin0580 protein; chromosome CDS607220 297 - 0.43771
lin0597 SubName: Full=Lin0597 protein; chromosome CDS628080 1404 + 0.380342
lin0627 SubName: Full=Lin0627 protein; chromosome CDS656278 1152 - 0.363715
lin0662 RecName: Full=Endonuclease III; EC=4.2.99.18; chromosome CDS692346 630 + 0.361905
lin0664 SubName: Full=Lin0664 protein; chromosome CDS694103 282 + 0.329787
lin0717 SubName: Full=Lin0717 protein; chromosome CDS741557 282 + 0.340426
lin0772 SubName: Full=Lin0772 protein; chromosome CDS793559 1254 - 0.271132
lin0827 SubName: Full=Lin0827 protein; chromosome CDS859530 279 + 0.308244
lin0839 SubName: Full=Lin0839 protein; chromosome CDS873139 1101 + 0.360581
lin0859 SubName: Full=Lin0859 protein; chromosome CDS894912 1551 + 0.430045
lin0928 RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; chromosome CDS959328 624 + 0.371795
lin0995 SubName: Full=Lin0995 protein; chromosome CDS1017980 480 + 0.410417
lin1083 SubName: Full=Lin1083 protein; chromosome CDS1108735 651 + 0.322581
lin1086 SubName: Full=Lin1086 protein; chromosome CDS1110321 1398 + 0.339056
lin1190 RecName: Full=Uracil-DNA glycosylase 2; Short=UDG 2; EC=3.2.2.27; chromosome CDS1203555 675 + 0.371852
lin1195 RecName: Full=Endonuclease MutS2; EC=3.1.-.-; chromosome CDS1207980 2358 + 0.399491
lin1209 SubName: Full=Lin1209 protein; chromosome CDS1226361 363 + 0.336088
lin1211 SubName: Full=Lin1211 protein; chromosome CDS1226999 1461 + 0.342916
lin1214 RecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; chromosome CDS1229882 1413 + 0.354565
lin1215 SubName: Full=Lin1215 protein; chromosome CDS1231748 477 + 0.36478
lin1224 SubName: Full=Lin1224 protein; chromosome CDS1240343 453 + 0.357616
lin1231 SubName: Full=Lin1231 protein; chromosome CDS1246563 1416 - 0.310028
lin1241 SubName: Full=Lin1241 protein; chromosome CDS1252093 1941 + 0.335909
lin1244 RecName: Full=Uncharacterized phage-related protein Lin1244/Lin1753; chromosome CDS1255528 918 + 0.345316
lin1245 SubName: Full=Lin1245 protein; SubName: Full=Lin1752 protein; chromosome CDS1256321 864 + 0.350694
lin1248 SubName: Full=Lin1248 protein; SubName: Full=Lin1749 protein; chromosome CDS1257766 438 + 0.369863
lin1254 SubName: Full=Lin1254 protein; SubName: Full=Lin1743 protein; chromosome CDS1261428 945 + 0.366138
lin1313 SubName: Full=Lin1313 protein; chromosome CDS1306246 861 + 0.373984
lin1348 SubName: Full=Lin1348 protein; chromosome CDS1344497 1200 - 0.323333
lin1398 RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS1391149 1353 + 0.383592
lin1399 RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS1392491 228 + 0.377193
lin1487 RecName: Full=Probable endonuclease 4; EC=3.1.21.2; AltName: Full=Endodeoxyribonuclease IV; AltName: Full=Endonuclease IV; chromosome CDS1488218 894 - 0.380313
lin1488 SubName: Full=Lin1488 protein; chromosome CDS1489127 1308 - 0.360092
lin1497 RecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS1500339 768 - 0.348958
lin1516 SubName: Full=Lin1516 protein; chromosome CDS1518708 1032 - 0.337209
lin1537 RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS1536181 417 - 0.405276
lin1544 SubName: Full=Lin1544 protein; chromosome CDS1544432 2397 - 0.390488
lin1549 SubName: Full=Lin1549 protein; chromosome CDS1551057 1284 - 0.384735
lin1560 SubName: Full=Lin1560 protein; chromosome CDS1563536 2352 - 0.385629
lin1584 RecName: Full=UPF0758 protein lin1584; chromosome CDS1587714 675 - 0.352593
lin1617 SubName: Full=Lin1617 protein; chromosome CDS1628779 999 - 0.372372
lin1623 SubName: Full=Lin1623 protein; chromosome CDS1633423 906 + 0.456954
lin1624 SubName: Full=Lin1624 protein; chromosome CDS1634365 720 + 0.472222
lin1662 SubName: Full=Lin1662 protein; chromosome CDS1672237 414 - 0.364734
lin1680 SubName: Full=Lin1680 protein; chromosome CDS1691808 582 - 0.398625
lin1685 SubName: Full=Lin1685 protein; chromosome CDS1696845 3219 - 0.361603
lin1687 SubName: Full=Lin1687 protein; chromosome CDS1703215 1125 - 0.387556
lin1737 SubName: Full=Lin1737 protein; chromosome CDS1740897 1338 - 0.356502
lin1743 SubName: Full=Lin1254 protein; SubName: Full=Lin1743 protein; chromosome CDS1746435 945 - 0.366138
lin1749 SubName: Full=Lin1248 protein; SubName: Full=Lin1749 protein; chromosome CDS1750604 438 - 0.369863
lin1752 SubName: Full=Lin1245 protein; SubName: Full=Lin1752 protein; chromosome CDS1751623 864 - 0.350694
lin1753 RecName: Full=Uncharacterized phage-related protein Lin1244/Lin1753; chromosome CDS1752362 918 - 0.345316
lin1756 SubName: Full=Lin1756 protein; chromosome CDS1754774 1983 - 0.334846
lin1758 SubName: Full=Lin1758 protein; chromosome CDS1757060 228 - 0.29386
lin1765 SubName: Full=Lin1765 protein; chromosome CDS1760914 1176 + 0.322279
lin1777 SubName: Full=Lin1777 protein; chromosome CDS1774244 474 - 0.383966
lin1797 SubName: Full=Lin1797 protein; chromosome CDS1804454 1098 - 0.373406
lin1813 SubName: Full=Lin1813 protein; chromosome CDS1817978 1863 - 0.323135
lin1833 SubName: Full=Lin1833 protein; chromosome CDS1838943 1329 - 0.373213
lin1870 RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS1882432 2016 - 0.382937
lin1894 SubName: Full=Lin1894 protein; chromosome CDS1912366 756 + 0.371693
lin1925 SubName: Full=Lin1925 protein; chromosome CDS1939235 2049 - 0.400195
lin1993 SubName: Full=Lin1993 protein; chromosome CDS2008260 402 + 0.395522
lin1994 SubName: Full=Lin1994 protein; chromosome CDS2008679 873 - 0.391753
lin2000 SubName: Full=Lin2000 protein; chromosome CDS2014915 1149 - 0.419495
lin2069 RecName: Full=Tyrosine recombinase XerD; chromosome CDS2084084 894 - 0.388143
lin2079 SubName: Full=Lin2079 protein; chromosome CDS2093788 558 - 0.387097
lin2082 RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS2096496 1071 - 0.395892
lin2156 SubName: Full=Lin2156 protein; chromosome CDS2180700 2241 + 0.394021
lin2159 SubName: Full=Lin2159 protein; chromosome CDS2184529 558 - 0.385305
lin2325 SubName: Full=Lin2325 protein; chromosome CDS2357449 1236 - 0.375405
lin2344 SubName: Full=Lin2344 protein; chromosome CDS2379374 483 - 0.36646
lin2348 SubName: Full=Lin2348 protein; chromosome CDS2381854 657 - 0.383562
lin2368 RecName: Full=ATP-dependent helicase/nuclease subunit A; EC=3.1.-.-; EC=3.6.4.12; AltName: Full=ATP-dependent helicase/nuclease AddA; chromosome CDS2398610 3708 - 0.335761
lin2402 RecName: Full=Single-stranded DNA-binding protein 3; Short=SSB 3; chromosome CDS2431065 483 - 0.42029
lin2409 SubName: Full=Lin2409 protein; chromosome CDS2433733 945 - 0.368254
lin2412 SubName: Full=Lin2412 protein; chromosome CDS2435694 933 - 0.353698
lin2413 SubName: Full=Lin2413 protein; chromosome CDS2436646 816 - 0.382353
lin2414 gp47 [Bacteriophage A118]SubName: Full=Gp47 [Bacteriophage A118]; chromosome CDS2437461 960 - 0.376042
lin2589 SubName: Full=Lin2589 protein; chromosome CDS2612970 1257 - 0.356404
lin2591 SubName: Full=Lin2591 protein; chromosome CDS2614992 480 - 0.308333
lin2601 SubName: Full=Lin2601 protein; chromosome CDS2619376 945 - 0.371429
lin2610 SubName: Full=Lin2610 protein; chromosome CDS2624653 1155 + 0.307359
lin2667 RecName: Full=Single-stranded DNA-binding protein; chromosome CDS2686080 366 - 0.34153
lin2735 SubName: Full=Lin2735 protein; chromosome CDS2756539 648 - 0.287037
lin2743 SubName: Full=Lin2743 protein; chromosome CDS2770410 297 - 0.333333
lin2823 SubName: Full=Lin2823 protein; chromosome CDS2837366 1257 + 0.420843
lin2883 SubName: Full=Lin2883 protein; chromosome CDS2897161 291 - 0.350515
lin2900 SubName: Full=Lin2900 protein; chromosome CDS2917032 1773 - 0.390299
lin2989 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3010550 471 - 0.307856
mfd transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS240860 3540 + 0.39322
mutL DNA mismatch repair proteinRecName: Full=DNA mismatch repair protein MutL; chromosome CDS1439760 1812 + 0.368102
mutM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS1605447 822 - 0.392944
mutS DNA mismatch repair (recognition)RecName: Full=DNA mismatch repair protein MutS; chromosome CDS1437158 2583 + 0.372822
nth probable endonuclease III (DNA repair)RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS2021915 660 - 0.377273
parC RecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS1319870 2457 + 0.376882
parE RecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome CDS1317906 1968 + 0.409553
pcrA ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; chromosome CDS1884471 2196 - 0.387523
polA DNA polymerase IRecName: Full=DNA polymerase; EC=2.7.7.7; chromosome CDS1606292 2628 - 0.36796
polC RecName: Full=DNA polymerase III PolC-type; Short=PolIII; EC=2.7.7.7; chromosome CDS1353726 4335 + 0.391465
priA SubName: Full=PriA protein; chromosome CDS1952935 2394 - 0.393066
recA Recombination protein recARecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1432339 1047 + 0.393505
recN DNA repair and genetic recombinationRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS1397570 1692 + 0.376478
recR RecName: Full=Recombination protein RecR; chromosome CDS2866853 597 - 0.420436
recS SubName: Full=RecS protein; chromosome CDS2071244 1404 - 0.349715
rnhB RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS1305326 786 + 0.382952
rnhC RecName: Full=Ribonuclease HIII; Short=RNase HIII; EC=3.1.26.4; chromosome CDS1204267 927 - 0.390507
ruvA RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1572888 606 - 0.363036
ruvB RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS1571865 1008 - 0.426587
sbcC SubName: Full=SbcC protein; chromosome CDS1700147 3072 - 0.364258
ssb RecName: Full=Single-stranded DNA-binding protein 1; Short=SSB 1; chromosome CDS42038 540 + 0.414815
topA RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS1307376 2079 + 0.368927
uvrA excinuclease ABC (subunit A)RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS2647067 2871 - 0.393939
uvrB excinuclease ABC (subunit B)RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS2649945 1977 - 0.383915
uvrC RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS1210805 1812 + 0.406733