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Gene list

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COG category: Transcription
Genomic element: pHCM1

Number of genes found: 12

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# Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18

>gid:896388  HCM1.207c  hypothetical protein
ATGAAGGATTATCTCTGTAAAAAGTTATTCAACCGGCTTTCCGGTACCCT
GGTGATCAGAGCGCGCTGCGGCAATAACATTACTGGCCTGGCATGTTGCA
ATATTCTTTATCCCTCGCCCCGATACAGCGGTCAGCTGCATATTAAAGAG
CTGTATGTTTCTCAGTGCGATCGAAATAAGGGCACGGGTAAAGCGATAAT
GCGCTTTATAGCCCGGCTTGCGCTTGAACAGGAATGCCTTAGCCTTAGCT
GGAACGCTGAAAAATCCAACCCCGGCGCTAACCGTTTTTATCAGGCTCTG
GGAGGCAGAATAAATGATCATATCGTCAATTATTACCTCCACGGGGAGAG
CCTGAGCAAACTGGCCTCAGGCATTTGA
>gid:896479  HCM1.244c  putative transcriptional regulator
ATGGCTAATTTAATACGAAAAGAGGTTACCTTTGAGTCCTCAATAGCCGC
GATAGGGGCGGCTATGTCTGACATTTCACGAGTTAAAATACTCAGTGCTT
TGATGGATGGGCGAGCTTGGACGGCCACTGAGCTAAGTTCTGTGGCGAAT
ATATCAGCTTCAACGGCGAGCAGTCATTTATCTAAATTATTAGATTGCCA
GCTAATCACAGTAGTAGCTCAAGGCAAGCATCGTTATTTTCGGCTAGCAG
GAAAAGATATTGCTGAATTGATGGAAAGTATGATGGGGATCTCCTTAAAC
CATGGCGTACATGCCAGAGTTTCCACGCCAGTGCATTTACGAAAAGCACG
TACTTGCTATGATCATTTAGCTGGCGAAGTTGCCGTTAAGATCTATGATT
CCCTTTGTCAACAGCAATGGATCACTGAAAATGGTTCAATGATCACATTA
AGTGGTATTCAATATTTTCATGAAATGGGAATTGACGTTCCTTCCAAACA
TTCACGTAAAATCTGTTGTGCGTGTTTAGATTGGAGTGAACGCCGTTTCC
ATTTAGGTGGGTACGTTGGAGCCGCATTATTTTCGCTTTATGAATCTAAA
GGGTGGTTAACTCGACATCTTGGTTACCGTGAAGTTACCATCACGGAAAA
AGGTTATGCTGCTTTTAAGACCCACTTTCACATTTAA
>gid:896486  HCM1.248  putative transcriptional regulator (partial)
ATGAAATTAAGACATCTCGATATCTTTTATGCTGTAATGACTTGTGGTTC
CTTAACGCGTGCGGCTGAAGTTTTACATATTTCTCAACCCGCGGCGAGTA
AAGCACTCAAACATGCTGAGCACTGA
>gid:896076  HCM1.58c  putative DNA-binding protein
ATGAGTGATCTGATGACTGATTCCCAACAGCAAACTAACTCACGGGTCTT
TAAATCCCCACTCGTGTCTTTTTCAACAGTGACCGGTTCCGGCCGATTCG
TCAGTGGTATGAAGCAGTTCCGCGACGCGAACCCTGACCTTTGTAATGAA
GTCACTGAACAGAAAGCATGGGCTATCAGCCCAACCGTGGTTCAAATCAC
GGAAGGATTCAACTCCCGTGAGATGGGAATGGGGGAAGCTTATTACCAGT
TGCCAGAAGTCGCCGATCATCTCAATAACATCAAGAATGCGTACATCCGG
GGTGATTACGTAGACCCTATCCGCGTTCTGATCAAAGACGGCATTCCGTA
CGTTCGCCAGGGACATTGCCGTTTAAAGGCTGCTTTGATGGCTGTGGCAG
AAGGGCATTCTAACCTCACCATTCTTTGCATCGAGATGAAAGCCGATGAG
ATCAGCTGCGAATTGACAACGATTGACGGAAACCGTGGCCTGGCTCTTTC
TCCTGTGGCTTTGGGTGAATCCTACCGACGTCTTCAGGCGCTGGGTGGAT
GGTCGCTTGACCGTATTGCCGAACGTGAGGGAAAAAGTAATACCACAATT
GCTGCTCTTATTCGTTTAACCGGCTGCTGTGTCTATCTCAAAAAACTGAT
CCATGCCGATGCCATTTCCTATGTAGCAGTCCTGTCCCTTATCGATGAGT
TCGGTGAAACGGAAGCTGTTGCGCGGATCGAAAAGATGATCGCAGACCTT
GAAAAGGCTGATTCAAGCGGTATCCAGATTAAGAAAACGCCACGCGGGCA
GATCCGTGTTGTCCCTTCCGATTTTAAACCCGCACGTGTTCCACCAGTTC
TCGCTACAAAAGCCGTCGAAGGGGTCAAACTCATTACGACGAGTCTATTG
CAGAAACTCGGTGATATCGAGTTGCCGGAGGTGACCGACTCCAGCGAAGA
TGAAGAAATTACCTTTACGCTGAACCGGAGCATGCTGGAGATGCTCAAGA
ACCTGCAAAGTGAGATTACGGAATCAGAAAACAAGCAGCTTCGCCGGGCC
GAAAATCGGCAAGCCCGATTGAAAGGGGAAAAAGTGACTTACAAAACCAA
GAAAAACGATAAAAATGGCGGAGAACCGCAATCCGAAACACCCCCAGCAC
AGGCTTAA
>gid:896087  HCM1.63c  hypothetical protein
ATGAATCACTGCGACTATCAGATTATTGAGATCAGTCCTAAAGCACTTTT
TATCGAATCTGGATTCAATCCACGTGAAGCGGTAATTGGTGAACTTTGTT
ATGAACAGGAACCAGTAAAATCGACCATTGTTTCTATTAAACAAGCCTAT
AAAGAGGGCAGACGAGTCGATTTAATTAAGGTTGTTAAGAAAGACTCCAA
TTACGTTGTAAGGCAGGGGCATTGCCGTTACAGAGCACTATCTCTTGCTC
TTGCGGAAGGAGCTGATATTCAGCTCATTTCAGTAGTTGTTATGAACTAT
AAGAATAAAAGTGAAGAATACCTGGAGAACCTTGATGGGAATAGGAATAA
CGGTCTTAATCCCGTAGCCTTAGCTTATGCACTGGCAGAGGCGCTGAAGC
TTGGCTCTACCGTTGAATCCCTTGCTATGCGCTATCAACGGTCTAGCACT
GCTATTCGTAACCAGCTTAAAATCCTTGATATGCCTTTAGAACTACAACG
TTTAATCAGTCTAAACCTGATTAAAAAAACACTCGCGATTGAGATCATGT
TGAAGTATTCCAATGACCATGCAAAAGTCCTTGCACATTTGGAATCGTGT
TCTCTTTTAGTACCATCAACTGAACCAGAACCTGTTTTATCTAAGACATC
AAGCGTTCAAACATCATCAAACGATGAGAAACTAGATAACCCGGAAACAC
TCCCTGTTCATGTTATTCCTAAGGAAGTTAAAACAAAATCCATCACTCGC
AGTTCATTGGGTATTAAACGGCTTTCTCATAAAAAAACTGAACGCTTAAA
AACTGAATTTATCGGGCTGATTGATACTGTACGGCCAGCACTAAACGACA
GTAATAAACTCACCGAATTAATTTTCGACGGACAACATTCCAATTTATTT
ACGAACATCAGCAGCACTTCCATCACAAAGACAACGGAAAGTGTAAAGAT
CACTCTAGATGAAGCAAAACTCCAGCTTTTATTAAGCCTTCTGAATGATG
AAAATACTGCTATCATCATTCCAAAATCTAAGGTTACAGAACTGCATGAA
ATTCGTGACCTGTTAACAAGTGAGTAG
>gid:896157  HCM1.87  putative plasmid partition protein
ATGAGTGATGAGCAGCATATCGGGAACGACAAATCCCGTTATATTAATGC
GCCTAAGCGTACTGAAGTAATCCATCGCTCCGGGCTTCAAGGCCTGAAAG
GTCAGCCACGCCTGAAGAAACTTTTTACATTACACAATGGGCGGAAGCTT
GAGGCGGAACACATCATTGTTCCGGCGGAAAAGGTGGAACTGGAAACCAC
AGTACACCCTCTGAACCCACGAAATCAGGAGGCTCTTTCTGTAAATGCAG
TAAGAGATATTCTGAAGGACATTGAAGCAAGAGGTGTTGATACTGAGGGC
GTTGCAGTTAAGCGGAACGGAGTGTATCTGCTAATAGAAGGTAGCCGCAG
GCGTTTCTGTTGCATTCAATCAGCAAAAGAATTGCCATTATGGGTTTTGC
CTGATGATGTTAACGCAGATGATATTAATTCCATCATATCAGCAACACAA
ACTTCTCGACGCTTTTCATATCGTGAAGTAGGTTTAAAGTATTTAAGGGA
AATGGAAGAGCATGGATTTGTTACCAATGAAGAGCTTGCAAACTATCATG
GTATCAGTCACGTGTCCGTCTCTAAGCGAGTTCAGGCTGCAAAGATTAAC
AGCACTCTTATTGCACTGTTTCCTGACTATGAAGCTATTCCGAATTCTTA
TTACAATCGCCTATTCCGACTTCAAAAATATATAGAGAAGAATTTATTTT
CTCTTGAAGAAGTTGTTGAGAATACACGTGAGGAAATTCGAGATCTGGAT
ATTTCTGATATTGCTGAAGCACAGAAAACCGTAATGGAGAAGATTACAAC
GGTAGTTGAAAAACTTGATATTAAACCACCTAGCAAAGGTTGGGATACAC
GTGAATTGGCAACTTTTACTAATAAAGATAAATATGCAAGAATTAGCAAA
AGTTCCTCGGGGCGTAAAATCCGTTTTGAGTTTAATAGAATGAACCGAGA
ATTAATTGACGAAATTGAGAAGTTTATAAAATCAAAACTGAGCGAAATGA
ATAATTAA
>gid:896294  merD  putative mercuric resistance operon coregulator
ATGAGCGCCTACACAGTGTCCCGGCTGGCCCTTGATGCCGGGGTGAGCGT
GCATATCGTGCGCGACTACCTGCTGCGCGGATTGCTACGGCCGGTCGCGT
ACACCACGGGCGGCTACGGCTTGTTCGATGACACCGCGTTGCAACGGCTG
CGCTTTGTACGGGCTGCCTTCGAAGCGGGTATCGGCCTGGACGCACTGGC
GCGGCTGTGCCGGGCGCTGGATGCTGCGGACGGTGACGGTGCGTCTGCGC
AGCTTGCCGTGTTGCGGCAACTCGTCGAGCGTCGGCGCGAGGCCCTGGCC
AGCCTCGAAATGCAACTGGCCGCCATGCCAACCGAACCGGCACAGCACGC
GGAGAGTCTGCCATGA
>gid:896440  merD  putative mercuric resistance operon coregulator
ATGAGCGCCTACACGGTATCGCAACTGGCCCATAACGCTGGGGTGAGCGT
ACATATCGTGCGCGACTACCTGGTGCGCGGCTTGTTACGGCCGGTGGCCT
GCACCACGGGCGGCTACGGCGTGTTCGACGATGCGGCCTTGCAACGGCTG
TGCTTCGTGCGCGCGGCCTTCGAGGCGGGTATCGGCCTGGATGCCCTGGC
GCGGCTGTGCCGTGCGCTCGACGCAGCGGACGGCGCACAAGCCGCAGCGC
AGCTTGCCGTGCTGCGCCAGTTGGTCGAGCGGCGGCGCGCGGCGTTGGCC
CATCTGGACGCGCAACTGGCCTCCATGCCAGCCGAGCGGGCGCACGAGGA
GGCATTGCCGTGA
>gid:896456  merR  putative mercuric resistance operon regulatory protein
ATGGAAAATAATTTGGAAAACCTGACCATTGGCGTTTTTGCCAAGGCGGC
CGGGGTCAACGTGGAGACAATCCGCTTCTATCAGCGCAAGGGCCTGTTGC
GGGAACCGGACAAGCCTTACGGCAGCATCCGCCGCTATGGGGAGGCGGAC
GTGGTTCGGGTGAAATTCGTGAAATCGGCACAGCGGCTGGGGTTCAGTCT
GGACGAGATTGCCGAGCTGTTGCGGCTCGACGATGGCACCCACTGCGAGG
AGGCCAGCAGCCTGGCCGAACACAAGCTCAAGGACGTGCGCGAGAAGATG
GCCGACTTGGCGCGCATGGAAACCGTGCTGTCTGAACTCGTGTGCGCCTG
CCATGCACGAAAGGGGAATGTTTCCTGCCCGTTGATCGCGTCACTACAGG
GCGAAGCAGGCCTGGCAAGGTCAGCTATGCCTTAG
>gid:896274  merR  putative mercuric resistance operon regulatory protein
ATGCAAATTAATTTTGAGAATCTGACCATTGGCGTTTTTGCCAAGGCGGC
CGGGGTCAATGTGGAGACCATCCGGTTCTACCAGCGCAAGGGCCTGCTGC
CGGAGCCAGACAAGCCCTATGGCAGCATTCGCCGCTATGGCGAGGCGGAT
GTAACACGAGTGCGGTTCGTGAAATCGGCCCAGCGGCTGGGCTTTAGCCT
GGACGAAATCGCCGAGCTACTGCGGCTGGAGGATGGCACCCATTGCGAGG
AAGCCAGCGGCCTGGCCGAGCACAAGCTCAAGGATGTGCGCGAGAAGATG
GCCGACTTGGCACGCATGGAGGCCGTGCTGTCTGAACTGGTGTGCGCCTG
CCATGCGCGGAAAGGGAACGTTTTCTGCCCGCTGATTGCGTCACTGCAAG
ACGGAACGAAGCTCGCTGCATCGGCGCGGGGGAGTCACGGGGTGACTACG
CCTTAG
>gid:896495  mucA  putative DNA-repair modulator
ATGTCTGTATTCCCTGAACGTTTTGCATCCCCTCCTCGTGATACAACCCC
TTTTTTCAGTGACCTACTGAGTTGCGGGGTGATGAGTCCGTGCGCCGGAC
ACGAAGACAATGAGCTGAATTTACATGATTTTGTGGTTCGTAATCGCCCC
GCGACTTTCTTTGTCAGGGCCTCAGGTCTCAGCATGGTAGACGCCGGAAT
AAACGACGGCGCCATACTGGTTGTGGATCGGTCACTGACTGCGGAGCACG
GCTCAATCGTCGTTGCGCTGGTTGACGGCGAGTTTACCGTGAAGATTTTG
CAGACCTTCCCGAAACTGATGTTGATGCCCTCCAACCCCGCCTTCAAGCC
GATACCTGTTAACCCGGACACTCTTGAAATCTGGGGCGTTGTCACCTTTG
CGTTGAATCAGTTTCCTCATGTACATGCACGTTGA
>gid:896475  tetR  tetracycline repressor protein
ATGATGTCTAGATTAGATAAAAGTAAAGTGATTAACAGCGCATTAGAGCT
GCTTAATGAGGTCGGAATCGAAGGTTTAACAACCCGTAAACTCGCCCAGA
AGCTAGGTGTAGAGCAGCCTACATTGTATTGGCATGTAAAAAATAAGCGG
GCTTTGCTCGACGCCTTAGCCATTGAGATGTTAGATAGGCACCATACTCA
CTTTTGCCCTTTAGAAGGGGAAAGCTGGCAAGATTTTTTACGTAATAACG
CTAAAAGTTTTAGATGTGCTTTACTAAGTCATCGCGATGGAGCAAAAGTA
CATTTAGGTACACGGCCTACAGAAAAACAGTATGAAACTCTCGAAAATCA
ATTAGCCTTTTTATGCCAACAAGGTTTTTCACTAGAGAATGCATTATATG
CACTCAGCGCTGTGGGGCATTTTACTTTAGGTTGCGTATTGGAAGATCAA
GAGCATCAAGTCGCTAAAGAAGAAAGGGAAACACCTACTACTGATAGTAT
GCCGCCATTATTACGACAAGCTATCGAATTATTTGATCACCAAGGTGCAG
AGCCAGCCTTCTTATTCGGCCTTGAATTGATCATATGCGGATTAGAAAAA
CAACTTAAATGTGAAAGTGGGTCTTAA