Gene list
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COG category: Transcription
Genomic element: pSymA
Number of genes found: 131
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Sinorhizobium meliloti, 1021 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SMa0372 | putative LysR-type regulator | pSymA | CDS | 199105 | 900 | - | 0.602222 |
NA | SMa0961 | putative response regulator of two-component system | pSymA | CDS | 538682 | 723 | + | 0.578147 |
NA | SMa1428 | putative TetR/AcrR-family transcriptional regulator | pSymA | CDS | 786798 | 660 | + | 0.562121 |
NA | SMa0498 | putative LysR-type regulator | pSymA | CDS | 271057 | 900 | - | 0.593333 |
NA | SMa1867 | Putative AsnC (lrp)-family transcriptional activator | pSymA | CDS | 1060211 | 477 | - | 0.555556 |
NA | SMa2325 | probable transcriptional regulator | pSymA | CDS | 1296390 | 693 | - | 0.649351 |
NA | SMa2269 | hypothetical protein | pSymA | CDS | 1267896 | 267 | + | 0.595506 |
NA | SMa2381 | hypothetical protein | pSymA | CDS | 1344998 | 474 | + | 0.594937 |
NA | SMa2167 | hypothetical protein | pSymA | CDS | 1221480 | 468 | + | 0.557692 |
NA | SMa0126 | putative cold shock protein | pSymA | CDS | 68805 | 210 | + | 0.566667 |
NA | SMa0223 | putative transcriptional regulator | pSymA | CDS | 122852 | 615 | - | 0.630894 |
NA | SMa0347 | putative LysR-type regulator | pSymA | CDS | 188006 | 888 | + | 0.620495 |
NA | SMa2227 | Putative histidine utilization repressor protein | pSymA | CDS | 1247113 | 948 | - | 0.552743 |
NA | SMa1139 | Truncated response regulator receiver domain | pSymA | CDS | 620850 | 267 | - | 0.588015 |
NA | SMa0021 | hypothetical protein | pSymA | CDS | 14450 | 645 | - | 0.55969 |
NA | SMa1736 | putative LysR-family transcriptional regulator | pSymA | CDS | 981384 | 882 | - | 0.586168 |
NA | SMa1725 | putative AraC-family transcriptional regulator | pSymA | CDS | 973132 | 639 | + | 0.56964 |
NA | SMa0520 | conserved hypothetical protein | pSymA | CDS | 280693 | 843 | + | 0.608541 |
NA | SMa0303 | putative LysR type regulator | pSymA | CDS | 169064 | 879 | + | 0.623436 |
NA | SMa0206 | putative two-component response regulator | pSymA | CDS | 113822 | 723 | + | 0.603043 |
NA | SMa2008 | Putative transcriptional regulator | pSymA | CDS | 1137545 | 606 | - | 0.643564 |
NA | SMa1825 | Hypothetical protein | pSymA | CDS | 1035458 | 909 | - | 0.594059 |
NA | SMa0267 | putative GntR-family regulator | pSymA | CDS | 150483 | 693 | + | 0.623377 |
NA | SMa0789 | hypothetical protein | pSymA | CDS | 429807 | 330 | + | 0.572727 |
NA | SMa0594 | hypothetical protein | pSymA | CDS | 316428 | 1032 | + | 0.589147 |
NA | SMa1550 | putative response regulator of two-component system | pSymA | CDS | 857628 | 684 | + | 0.602339 |
NA | SMa0355 | putative LysR-type regulator | pSymA | CDS | 191811 | 606 | + | 0.572607 |
NA | SMa2151 | probable DNA-binding protein | pSymA | CDS | 1215193 | 432 | + | 0.56713 |
NA | SMa0065 | putative GntR-family transcriptional regulator | pSymA | CDS | 35455 | 693 | + | 0.643579 |
NA | SMa0160 | putative GntR-family transcription regulator | pSymA | CDS | 88416 | 675 | + | 0.604444 |
NA | SMa1253 | Hypothetical protein | pSymA | CDS | 686450 | 270 | + | 0.577778 |
NA | SMa0750 | probable LysR-family transcriptional activator | pSymA | CDS | 403178 | 879 | - | 0.584755 |
NA | SMa2147 | hypothetical protein | pSymA | CDS | 1213698 | 891 | - | 0.567901 |
NA | SMa2107 | probable GstR transcriptional regulator | pSymA | CDS | 1189053 | 906 | - | 0.559603 |
NA | SMa1966 | Putative LysR-family transcriptional regulator | pSymA | CDS | 1118218 | 1110 | - | 0.601802 |
NA | SMa0535 | hypothetical protein | pSymA | CDS | 287402 | 174 | - | 0.626437 |
NA | SMa0985 | putative LysR-family transcriptional regulator | pSymA | CDS | 547525 | 762 | - | 0.607612 |
NA | SMa1720 | putative LysR-family transcriptional regulator | pSymA | CDS | 970632 | 945 | + | 0.595767 |
NA | SMa1828 | Putative transcriptional activator | pSymA | CDS | 1036363 | 1152 | - | 0.598958 |
NA | SMa1349 | Putative GntR-family transcriptional regulator | pSymA | CDS | 738144 | 693 | - | 0.608947 |
NA | SMa0310 | putative LysR-type transcriptional regulator | pSymA | CDS | 174273 | 732 | - | 0.601093 |
NA | SMa0039 | probable LysR-family protein | pSymA | CDS | 23398 | 942 | - | 0.623142 |
NA | SMa1076 | Hypothetical protein | pSymA | CDS | 587855 | 459 | - | 0.566449 |
NA | SMa2287 | putative LysR-family transcriptional regulator | pSymA | CDS | 1271938 | 948 | - | 0.661392 |
NA | SMa0078 | putative LacI-family transcriptional regulator | pSymA | CDS | 40959 | 1023 | + | 0.624633 |
NA | SMa0222 | putative GntR-family transcriptional regulator | pSymA | CDS | 122050 | 729 | + | 0.615912 |
NA | SMa1782 | Putative LysR-family transcriptional regulator | pSymA | CDS | 1009854 | 894 | + | 0.616331 |
NA | SMa1882 | Putative transcriptional activator | pSymA | CDS | 1069239 | 660 | - | 0.592424 |
NA | SMa2020 | putative transcription regulator | pSymA | CDS | 1143618 | 468 | - | 0.58547 |
NA | SMa1476 | Putative AraC-family transcription regulator | pSymA | CDS | 811255 | 993 | - | 0.63142 |
NA | SMa1893 | Putative LysR-family transcriptional activator | pSymA | CDS | 1075895 | 876 | + | 0.630137 |
NA | SMa2215 | putative GntR-family transcriptional regulator | pSymA | CDS | 1240820 | 768 | + | 0.615885 |
NA | SMa0246 | putative GntR-family transcriptional regulator | pSymA | CDS | 136418 | 702 | + | 0.615385 |
NA | SMa1442 | Putative GntR-family transcription factor | pSymA | CDS | 795334 | 765 | - | 0.640523 |
NA | SMa1176 | Hypothetical protein | pSymA | CDS | 643876 | 585 | - | 0.591453 |
NA | SMa0824 | hypothetical protein | pSymA | CDS | 452858 | 468 | + | 0.621795 |
NA | SMa1480 | Probable LysR-type activator | pSymA | CDS | 813928 | 975 | + | 0.605128 |
NA | SMa1987 | Putative LysR-family transcriptional regulator | pSymA | CDS | 1127616 | 840 | + | 0.652381 |
NA | SMa1887 | Putative transcriptional regulator | pSymA | CDS | 1074259 | 603 | + | 0.641791 |
NA | SMa0649 | conserved domain of hypothetical protein | pSymA | CDS | 346459 | 201 | + | 0.616915 |
NA | SMa0557 | LysR family transcriptional regulator, probable | pSymA | CDS | 295587 | 888 | - | 0.621622 |
NA | SMa2027 | Putative LysR-family transcriptional regulator | pSymA | CDS | 1147165 | 894 | - | 0.637584 |
NA | SMa0229 | hypothetical protein | pSymA | CDS | 128085 | 423 | + | 0.605201 |
NA | SMa0193 | hypothetical protein | pSymA | CDS | 106326 | 267 | - | 0.588015 |
NA | SMa2049 | putative LacI-family transcription regulator | pSymA | CDS | 1158529 | 1083 | + | 0.633426 |
NA | SMa1823 | Hypothetical protein | pSymA | CDS | 1034405 | 909 | - | 0.567657 |
NA | SMa1943 | Putative transcriptional regulator | pSymA | CDS | 1103712 | 456 | - | 0.657895 |
NA | SMa2004 | putative ROK-family transcriptional regulator | pSymA | CDS | 1136007 | 1074 | + | 0.630354 |
NA | SMa0144 | hypothetical protein | pSymA | CDS | 79504 | 786 | + | 0.648855 |
NA | SMa0179 | putative transcriptional activator | pSymA | CDS | 98400 | 918 | - | 0.624183 |
NA | SMa1654 | putative GntR-family transcriptional regulator | pSymA | CDS | 924741 | 699 | + | 0.58083 |
NA | SMa2245 | conserved hypothetical protein | pSymA | CDS | 1257344 | 2538 | - | 0.499212 |
NA | SMa0353 | putative LysR-type regulator | pSymA | CDS | 190833 | 915 | + | 0.608743 |
NA | SMa2293 | probable beta lactamase transcriptional activator | pSymA | CDS | 1274593 | 885 | - | 0.60678 |
NA | SMa1979 | Putative LysR-family transcriptional regulator | pSymA | CDS | 1124993 | 873 | + | 0.607102 |
NA | SMa1493 | Putative LysR-type transcription factor | pSymA | CDS | 822713 | 924 | + | 0.601732 |
NA | SMa2303 | putative ROK family transcriptional regulator | pSymA | CDS | 1283423 | 1227 | - | 0.624287 |
NA | SMa1299 | Conserved hypothetical protein | pSymA | CDS | 709054 | 612 | + | 0.604575 |
NA | SMa0307 | putative LysR-type regulator | pSymA | CDS | 172016 | 987 | - | 0.575481 |
NA | SMa1900 | Hypothetical protein | pSymA | CDS | 1079608 | 558 | + | 0.586021 |
NA | SMa2387 | hypothetical protein | pSymA | CDS | 1348415 | 657 | + | 0.601218 |
NA | SMa1956 | Putative LysR-family transcriptional regulator | pSymA | CDS | 1111325 | 933 | - | 0.62701 |
NA | SMa1835 | Hypothetical protein | pSymA | CDS | 1041083 | 846 | - | 0.618203 |
NA | SMa1853 | Hypothetical protein | pSymA | CDS | 1051670 | 852 | + | 0.66784 |
NA | SMa1625 | putative LysR-family transcriptional regulator | pSymA | CDS | 904985 | 924 | - | 0.630952 |
NA | SMa1660 | putative acetyltransferase | pSymA | CDS | 926871 | 585 | - | 0.635897 |
NA | SMa0281 | putative regulator, MerR family | pSymA | CDS | 158400 | 405 | + | 0.592593 |
NA | SMa1413 | Hypothetical protein | pSymA | CDS | 777118 | 276 | - | 0.576087 |
NA | SMa1056 | Putative transcriptional regulator | pSymA | CDS | 577474 | 348 | - | 0.609195 |
NA | SMa0063 | putative GntR-family transcriptional regulator | pSymA | CDS | 33372 | 816 | + | 0.609069 |
NA | SMa2014 | Putative transcriptional regulator | pSymA | CDS | 1141504 | 438 | - | 0.586758 |
NA | SMa1505 | Putative GntR-family transcriptional regulator | pSymA | CDS | 830383 | 786 | + | 0.645038 |
NA | SMa2275 | hypothetical protein | pSymA | CDS | 1268802 | 276 | - | 0.561594 |
NA | SMa1933 | Putative transcriptional activator | pSymA | CDS | 1098786 | 615 | - | 0.661789 |
NA | SMa0717 | putative calcium binding transcriptional regulatory protein | pSymA | CDS | 389265 | 1710 | + | 0.654386 |
NA | SMa1822 | Hypothetical protein | pSymA | CDS | 1033278 | 1095 | - | 0.595434 |
NA | SMa1387 | Putative LysR-type transcriptional regulator | pSymA | CDS | 764198 | 915 | + | 0.618579 |
NA | SMa1960 | Conserved hypothetical protein | pSymA | CDS | 1114922 | 378 | + | 0.608466 |
NA | SMa0062 | putative GntR-family transcriptional regulator | pSymA | CDS | 32634 | 690 | + | 0.643478 |
NA | SMa0969 | putative response regulator of two-component system | pSymA | CDS | 540997 | 750 | + | 0.556 |
NA | SMa1323 | Hypothetical protein | pSymA | CDS | 721436 | 369 | + | 0.547425 |
NA | SMa0232 | hypothetical protein | pSymA | CDS | 128613 | 666 | + | 0.615616 |
NA | SMa2015 | Putative transcriptional regulator | pSymA | CDS | 1141886 | 522 | - | 0.60728 |
NA | SMa1759 | putative GntR-family transcriptional regulator | pSymA | CDS | 999887 | 681 | - | 0.628488 |
NA | SMa1602 | putative LysR-family transcriptional regulator | pSymA | CDS | 893872 | 909 | - | 0.592959 |
NA | SMa2163 | hypothetical protein | pSymA | CDS | 1218761 | 729 | + | 0.59808 |
NA | SMa1138 | Truncated response regulator | pSymA | CDS | 620365 | 492 | - | 0.587398 |
NA | SMa1954 | Putative LysR-family transcriptional regulator | pSymA | CDS | 1109860 | 984 | + | 0.601626 |
NA | SMa1726 | putative transcriptional regulator | pSymA | CDS | 973914 | 657 | - | 0.570776 |
NA | SMa1749 | putative transcriptional regulator | pSymA | CDS | 991460 | 900 | - | 0.568889 |
NA | SMa2133 | hypothetical protein | pSymA | CDS | 1205622 | 792 | - | 0.568182 |
NA | SMa1632 | putative LysR-family transcriptional regulator | pSymA | CDS | 907961 | 954 | + | 0.580713 |
NA | SMa0149 | hypothetical protein | pSymA | CDS | 81858 | 483 | + | 0.590062 |
NA | SMa1454 | Putative transcription factor | pSymA | CDS | 801272 | 1071 | + | 0.634921 |
NA | SMa0402 | putative GntR-type regulator | pSymA | CDS | 217871 | 732 | + | 0.618852 |
NA | SMa0190 | hypothetical protein | pSymA | CDS | 104560 | 630 | + | 0.579365 |
NA | SMa0097 | putative transcriptional regulator | pSymA | CDS | 50138 | 942 | - | 0.660297 |
NA | SMa2341 | putative LysR-family transcriptional regulator | pSymA | CDS | 1319298 | 876 | - | 0.626712 |
NA | SMa0319 | putative AraC-type regulator | pSymA | CDS | 177973 | 1002 | + | 0.595808 |
atrA | SMa0955 | AtrA transcriptional regulator | pSymA | CDS | 534018 | 693 | + | 0.574315 |
cspA5 | SMa0181 | probable CspA5 cold shock protein transcriptional regulator | pSymA | CDS | 100505 | 204 | - | 0.509804 |
cspA6 | SMa0738 | probable CspA6 cold shock protein transcriptional regulator | pSymA | CDS | 396650 | 204 | - | 0.544118 |
hmrR | SMa1014 | HmrR heavy metal dependent transcriptional regulator | pSymA | CDS | 563252 | 417 | + | 0.609113 |
nifA | SMa0815 | NifA transcriptional activator | pSymA | CDS | 445895 | 1572 | - | 0.556616 |
nodD1 | SMa0870 | NodD1 transcription regulator | pSymA | CDS | 481810 | 927 | + | 0.555556 |
nodD2 | SMa0757 | NodD2 nod box-dependent transcription activator | pSymA | CDS | 409254 | 933 | + | 0.572347 |
nodD3 | SMa0840 | NodD3 transcriptional regulator | pSymA | CDS | 462751 | 942 | - | 0.557325 |
repB2 | SMa2393 | RepB2 replication protein | pSymA | CDS | 1351362 | 1014 | - | 0.574951 |
rhrA | SMa2412 | RhrA transcriptional activator | pSymA | CDS | 1314632 | 945 | - | 0.583069 |
rpoE6 | SMa0143 | putative RpoE6 RNA polymerase sigma factor | pSymA | CDS | 78902 | 606 | + | 0.605611 |
syrM | SMa0849 | SyrM transcriptional regulator | pSymA | CDS | 466418 | 981 | + | 0.61366 |