Gene list
Applied filters:
COG category: Transcription
Genomic element: chromosome
Number of genes found: 178
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Clostridium perfringens str. 13, 13 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
CPE0029 | probable transcription regulator | chromosome | CDS | 42348 | 570 | + | 0.257895 | |
CPE0073 | probable transcription antiterminator | chromosome | CDS | 101425 | 585 | + | 0.263248 | |
CPE0074 | probable transcription antiterminator | chromosome | CDS | 101897 | 378 | + | 0.275132 | |
CPE0078 | probable transcriptional regulator | chromosome | CDS | 104966 | 519 | - | 0.233141 | |
CPE0119 | two-component response regulator | chromosome | CDS | 159434 | 681 | + | 0.292217 | |
CPE0126 | hypothetical protein | chromosome | CDS | 165999 | 327 | + | 0.204893 | |
CPE0142 | phage-related hypothetical protein | chromosome | CDS | 182670 | 216 | + | 0.268519 | |
CPE0143 | phage-related hypothetical protein | chromosome | CDS | 182876 | 360 | + | 0.236111 | |
CPE0148 | probable transcriptional regulator | chromosome | CDS | 188513 | 690 | + | 0.247826 | |
CPE0188 | probable glucose kinase | chromosome | CDS | 240201 | 888 | + | 0.322072 | |
CPE0189 | conserved hypothetical protein | chromosome | CDS | 241279 | 840 | + | 0.280952 | |
CPE0197 | conserved hypothetical protein | chromosome | CDS | 253730 | 771 | + | 0.255512 | |
CPE0198 | hypothetical protein | chromosome | CDS | 254724 | 501 | + | 0.245509 | |
CPE0236 | two-component response regulator | chromosome | CDS | 308285 | 672 | - | 0.263393 | |
CPE0256 | probable transcriptional regulator | chromosome | CDS | 327853 | 735 | - | 0.311565 | |
CPE0258 | probable transcriptional regulator | chromosome | CDS | 329114 | 210 | + | 0.257143 | |
CPE0259 | probable transcriptional regulator | chromosome | CDS | 329698 | 507 | + | 0.274162 | |
CPE0281 | probable transcriptional regulator | chromosome | CDS | 361080 | 240 | - | 0.3125 | |
CPE0284 | probable transcriptional regulator | chromosome | CDS | 363632 | 1023 | - | 0.304008 | |
CPE0309 | probable transcriptional regulator | chromosome | CDS | 392981 | 687 | + | 0.298399 | |
CPE0316 | probable transcriptional regulator | chromosome | CDS | 400516 | 780 | - | 0.283333 | |
CPE0346 | probable transcriptional regulator | chromosome | CDS | 438898 | 750 | + | 0.266667 | |
CPE0359 | probable RNA polymerase ECF-type sigma factor | chromosome | CDS | 456308 | 537 | - | 0.234637 | |
CPE0366 | probable transcription regulator | chromosome | CDS | 468439 | 1563 | + | 0.290467 | |
CPE0370 | probable transcriptional regulator | chromosome | CDS | 477962 | 858 | - | 0.257576 | |
CPE0377 | probable transcriptional regulator | chromosome | CDS | 487803 | 579 | + | 0.303972 | |
CPE0386 | probable transcriptional regulator | chromosome | CDS | 499248 | 732 | - | 0.281421 | |
CPE0417 | probable transcriptional regulator | chromosome | CDS | 532934 | 993 | + | 0.287009 | |
CPE0434 | hypothetical protein | chromosome | CDS | 555174 | 489 | + | 0.302658 | |
CPE0443 | probable transcriptional regulator | chromosome | CDS | 563577 | 372 | + | 0.330645 | |
CPE0448 | probable transcriptional regulator | chromosome | CDS | 566776 | 858 | - | 0.250583 | |
CPE0453 | probable transcriptional regulator | chromosome | CDS | 572798 | 786 | - | 0.236641 | |
CPE0457 | two-component response regulator | chromosome | CDS | 577266 | 705 | + | 0.293617 | |
CPE0507 | hypothetical protein | chromosome | CDS | 630408 | 648 | + | 0.299383 | |
CPE0518 | two-component response regulator | chromosome | CDS | 644991 | 717 | + | 0.25523 | |
CPE0525 | probable transcriptional regulator | chromosome | CDS | 651851 | 447 | - | 0.266219 | |
CPE0532 | two-component response regulator | chromosome | CDS | 662600 | 669 | + | 0.289985 | |
CPE0542 | hypothetical protein | chromosome | CDS | 670673 | 453 | - | 0.225166 | |
CPE0596 | hypothetical protein | chromosome | CDS | 744879 | 267 | + | 0.292135 | |
CPE0631 | probable PBP5 synthesis regulator protein | chromosome | CDS | 791586 | 1020 | - | 0.302941 | |
CPE0642 | two-component response regulator | chromosome | CDS | 804031 | 696 | + | 0.277299 | |
CPE0650 | conserved hypothetical protein | chromosome | CDS | 812504 | 1134 | + | 0.268959 | |
CPE0657 | conserved hypothetical protein | chromosome | CDS | 819969 | 1338 | + | 0.28849 | |
CPE0704 | 30S ribosomal protein homolog | chromosome | CDS | 878020 | 333 | + | 0.279279 | |
CPE0710 | probable transcriptional regulator | chromosome | CDS | 884390 | 483 | + | 0.325052 | |
CPE0715 | conserved hypothetical protein | chromosome | CDS | 889388 | 516 | + | 0.263566 | |
CPE0722 | probable transcriptional regulator | chromosome | CDS | 897523 | 663 | + | 0.27451 | |
CPE0727 | conserved hypothetical protein | chromosome | CDS | 904693 | 807 | + | 0.289963 | |
CPE0730 | conserved hypothetical protein | chromosome | CDS | 906584 | 465 | + | 0.251613 | |
CPE0733 | probable transcriptional regulator | chromosome | CDS | 908623 | 897 | - | 0.249721 | |
CPE0738 | hypothetical protein | chromosome | CDS | 915477 | 279 | - | 0.27957 | |
CPE0740 | conserved hypothetical protein | chromosome | CDS | 916727 | 333 | + | 0.267267 | |
CPE0745 | probable transcriptional regulator | chromosome | CDS | 922990 | 555 | - | 0.275676 | |
CPE0750 | hypothetical protein | chromosome | CDS | 929956 | 411 | + | 0.22871 | |
CPE0764 | hypothetical protein | chromosome | CDS | 944309 | 630 | - | 0.255556 | |
CPE0765 | probable transcriptional regulator | chromosome | CDS | 945090 | 804 | + | 0.226368 | |
CPE0770 | probable transcriptional regulator | chromosome | CDS | 951402 | 840 | - | 0.282143 | |
CPE0787 | probable transcriptional regulator | chromosome | CDS | 971936 | 426 | + | 0.28169 | |
CPE0789 | probable transcriptional regulator | chromosome | CDS | 973186 | 444 | + | 0.240991 | |
CPE0814 | conserved hypothetical protein | chromosome | CDS | 998264 | 489 | + | 0.265849 | |
CPE0837 | probable transcriptional regulator | chromosome | CDS | 1026369 | 285 | + | 0.25614 | |
CPE0840 | two-component response regulator | chromosome | CDS | 1028688 | 669 | + | 0.282511 | |
CPE0848 | hypothetical protein | chromosome | CDS | 1036701 | 738 | + | 0.220867 | |
CPE0859 | conserved hypothetical protein | chromosome | CDS | 1052896 | 939 | + | 0.266241 | |
CPE0869 | hypothetical protein | chromosome | CDS | 1069713 | 570 | + | 0.296491 | |
CPE0871 | hypothetical protein | chromosome | CDS | 1071723 | 564 | - | 0.23227 | |
CPE0876 | hypothetical protein | chromosome | CDS | 1076721 | 444 | + | 0.31982 | |
CPE0939 | probable acetyltransferase | chromosome | CDS | 1138271 | 513 | + | 0.290448 | |
CPE0948 | two-component response regulator | chromosome | CDS | 1146821 | 690 | + | 0.271014 | |
CPE0961 | probable transcriptional regulator | chromosome | CDS | 1157357 | 432 | + | 0.243056 | |
CPE0980 | probable transcriptional regulator | chromosome | CDS | 1180337 | 819 | - | 0.225885 | |
CPE1031 | probable transcriptional regulator | chromosome | CDS | 1232895 | 735 | + | 0.277551 | |
CPE1067 | probable transcriptional regulator | chromosome | CDS | 1273892 | 465 | + | 0.277419 | |
CPE1077 | hypothetical protein | chromosome | CDS | 1282443 | 390 | - | 0.297436 | |
CPE1082 | probable transcriptional regulator | chromosome | CDS | 1285574 | 876 | + | 0.276256 | |
CPE1090 | hypothetical protein | chromosome | CDS | 1292023 | 477 | - | 0.272537 | |
CPE1097 | probable transcriptional regulator | chromosome | CDS | 1300313 | 213 | - | 0.2723 | |
CPE1100 | hypothetical protein | chromosome | CDS | 1301594 | 693 | + | 0.238095 | |
CPE1104 | hypothetical protein | chromosome | CDS | 1306795 | 432 | + | 0.310185 | |
CPE1110 | phage-related conserved hypothetical protein | chromosome | CDS | 1310119 | 1098 | + | 0.277778 | |
CPE1144 | probable transcriptional regulator | chromosome | CDS | 1338112 | 966 | - | 0.281574 | |
CPE1176 | conserved hypothetical protein | chromosome | CDS | 1372966 | 423 | - | 0.252955 | |
CPE1193 | two-component response regulator | chromosome | CDS | 1390419 | 678 | - | 0.280236 | |
CPE1197 | probable helicase protein | chromosome | CDS | 1398012 | 2346 | - | 0.281756 | |
CPE1280 | hypothetical protein | chromosome | CDS | 1504584 | 153 | - | 0.281046 | |
CPE1283 | probable transcriptional regulator | chromosome | CDS | 1512322 | 750 | + | 0.292 | |
CPE1305 | probable transcriptional regulator | chromosome | CDS | 1544797 | 1080 | - | 0.318519 | |
CPE1340 | probable transcriptional regulator | chromosome | CDS | 1582126 | 1014 | - | 0.300789 | |
CPE1369 | probable acetyltransferase | chromosome | CDS | 1619964 | 504 | - | 0.277778 | |
CPE1396 | ATP-dependent RNA helicase | chromosome | CDS | 1647504 | 1587 | + | 0.31317 | |
CPE1475 | probable transcriptional regulator | chromosome | CDS | 1731671 | 885 | - | 0.263277 | |
CPE1516 | probable RNA helicase | chromosome | CDS | 1773697 | 1224 | - | 0.280229 | |
CPE1533 | probable transcriptional | chromosome | CDS | 1795396 | 981 | - | 0.277268 | |
CPE1568 | hypothetical protein | chromosome | CDS | 1837145 | 405 | - | 0.271605 | |
CPE1570 | probable phage shock protein | chromosome | CDS | 1838800 | 714 | - | 0.27591 | |
CPE1625 | SWI/SNF family helicase | chromosome | CDS | 1896218 | 3255 | - | 0.274962 | |
CPE1626 | probable transcriptional regulator | chromosome | CDS | 1899839 | 987 | - | 0.284701 | |
CPE1635 | probable transcriptional regulator | chromosome | CDS | 1907638 | 567 | - | 0.27866 | |
CPE1654 | probable transcriptional regulator | chromosome | CDS | 1926770 | 471 | + | 0.286624 | |
CPE1688 | conserved hypothetical protein | chromosome | CDS | 1964292 | 267 | - | 0.299625 | |
CPE1701 | transcriptional pleiotropic repressor | chromosome | CDS | 1979521 | 777 | - | 0.293436 | |
CPE1717 | conserved hypothetical protein | chromosome | CDS | 1996363 | 1074 | - | 0.292365 | |
CPE1759 | hypothetical protein | chromosome | CDS | 2038676 | 450 | - | 0.288889 | |
CPE1786 | conserved hypothetical protein | chromosome | CDS | 2065437 | 387 | - | 0.273902 | |
CPE1804 | conserved hypothetical protein | chromosome | CDS | 2083564 | 588 | - | 0.284014 | |
CPE1847 | probable fibronectin-binding protein | chromosome | CDS | 2117443 | 1728 | + | 0.25463 | |
CPE1914 | probable PBP 5 synthesis repressor | chromosome | CDS | 2192466 | 1422 | + | 0.281997 | |
CPE1925 | two-component response regulator | chromosome | CDS | 2205887 | 798 | + | 0.283208 | |
CPE1956 | probable valine-pyruvate transaminase | chromosome | CDS | 2244267 | 1407 | - | 0.265103 | |
CPE1967 | conserved hypothetical protein | chromosome | CDS | 2256585 | 540 | + | 0.32963 | |
CPE1990 | probable serine/threonine protein kinase | chromosome | CDS | 2279929 | 597 | - | 0.259631 | |
CPE2013 | hypothetical protein | chromosome | CDS | 2307094 | 627 | - | 0.307815 | |
CPE2028 | probable transcriptional regulator | chromosome | CDS | 2319244 | 357 | - | 0.285714 | |
CPE2077 | probable transcriptional regulator | chromosome | CDS | 2381846 | 894 | - | 0.315436 | |
CPE2091 | conserved hypothetical protein | chromosome | CDS | 2399789 | 306 | + | 0.267974 | |
CPE2102 | probable ATP-dependent RNA helicase | chromosome | CDS | 2409786 | 1758 | - | 0.28157 | |
CPE2109 | hypothetical protein | chromosome | CDS | 2419685 | 450 | - | 0.251111 | |
CPE2123 | probable membrane-bound protein | chromosome | CDS | 2435436 | 1314 | - | 0.286149 | |
CPE2168 | conserved hypothetical protein | chromosome | CDS | 2484325 | 2163 | - | 0.296348 | |
CPE2217 | conserved hypothetical protein | chromosome | CDS | 2538939 | 888 | - | 0.28491 | |
CPE2240 | two-component response regulator | chromosome | CDS | 2563369 | 468 | - | 0.286325 | |
CPE2241 | hypothetical protein | chromosome | CDS | 2563901 | 153 | - | 0.287582 | |
CPE2304 | probable transcriptional regulator | chromosome | CDS | 2650104 | 360 | - | 0.288889 | |
CPE2307 | hypothetical protein | chromosome | CDS | 2652430 | 411 | - | 0.250608 | |
CPE2332 | two-component response regulator | chromosome | CDS | 2685106 | 693 | - | 0.291486 | |
CPE2358 | probable sigma-L-dependent transcriptional regulator | chromosome | CDS | 2717915 | 2007 | + | 0.285999 | |
CPE2364 | two-component response regulator | chromosome | CDS | 2727062 | 699 | - | 0.280401 | |
CPE2435 | probable transcriptional regulator | chromosome | CDS | 2783822 | 723 | - | 0.308437 | |
CPE2468 | conserved hypothetical protein | chromosome | CDS | 2824139 | 780 | - | 0.303846 | |
CPE2482 | stage V sprulation protein T | chromosome | CDS | 2840498 | 549 | - | 0.324226 | |
CPE2488 | two-component response regulator | chromosome | CDS | 2849186 | 687 | - | 0.323144 | |
CPE2494 | probable transcriptional regulator | chromosome | CDS | 2855996 | 909 | + | 0.276128 | |
CPE2510 | conserved hypothetical protein | chromosome | CDS | 2875934 | 441 | + | 0.29932 | |
CPE2546 | probable transcriptional regulator | chromosome | CDS | 2916487 | 666 | - | 0.286787 | |
CPE2564 | conserved hypothetical protein | chromosome | CDS | 2937534 | 672 | - | 0.279762 | |
CPE2627 | probable transcriptional regulator | chromosome | CDS | 3002476 | 726 | - | 0.290634 | |
argR | arginine repressor | chromosome | CDS | 221496 | 456 | + | 0.287281 | |
argR | probable arginine repressor | chromosome | CDS | 2095007 | 453 | - | 0.309051 | |
ccpA | probable transcriptional regulator | chromosome | CDS | 2907177 | 999 | - | 0.293293 | |
cspL | cold shock protein | chromosome | CDS | 1450066 | 210 | + | 0.342857 | |
ctsR | transcriptional repressor of class III stress genes | chromosome | CDS | 2792281 | 456 | - | 0.29386 | |
deaD | probable ATP-dependent RNA helicase | chromosome | CDS | 1056913 | 1437 | + | 0.298539 | |
fruR | probable transcriptional regulator | chromosome | CDS | 727822 | 747 | - | 0.286479 | |
glcK | probable glucose kinase | chromosome | CDS | 114586 | 948 | + | 0.355485 | |
glpP | probable glycerol uptake operon antiterminator | chromosome | CDS | 2924327 | 561 | - | 0.279857 | |
greA | transcription elongation factor | chromosome | CDS | 1474429 | 465 | + | 0.32043 | |
greA | transcriptional elongation factor | chromosome | CDS | 2822397 | 477 | - | 0.318658 | |
hrcA | heat-inducible transcriptional repressor | chromosome | CDS | 2326329 | 1020 | - | 0.29902 | |
iolR | transcription repressor of myo-inositol catabolism operon | chromosome | CDS | 117931 | 771 | - | 0.267185 | |
lexA | LexA repressor | chromosome | CDS | 1359730 | 612 | - | 0.289216 | |
malR | probable transcriptional regulator | chromosome | CDS | 2696149 | 1014 | - | 0.290927 | |
mfd | transcription-repair coupling factor | chromosome | CDS | 2842370 | 3489 | - | 0.29808 | |
nusA | probable transcriptional terminator | chromosome | CDS | 1964586 | 1101 | - | 0.299728 | |
nusB | probable N utilization substance protein B | chromosome | CDS | 2102298 | 408 | - | 0.247549 | |
nusG | transcription antitermination protein | chromosome | CDS | 2768161 | 522 | - | 0.335249 | |
recG | ATP-dependent DNA helicase | chromosome | CDS | 2007021 | 2073 | - | 0.283165 | |
relA | GTP pyrophosphokinase | chromosome | CDS | 2219623 | 2181 | - | 0.298028 | |
rho | transcription terminator Rho factor | chromosome | CDS | 2526259 | 1440 | - | 0.294444 | |
rncS | ribonuclease III | chromosome | CDS | 1997415 | 714 | - | 0.27451 | |
rnr | ribonuclease R | chromosome | CDS | 1530963 | 2256 | - | 0.314716 | |
rpoA | RNA polymerase alpha subunit | chromosome | CDS | 2737177 | 948 | - | 0.317511 | |
rpoB | RNA polymerase beta subunit | chromosome | CDS | 2761768 | 3705 | - | 0.349798 | |
rpoC | RNA polymerase beta' subunit | chromosome | CDS | 2758152 | 3537 | - | 0.343794 | |
rpoZ | probable DNA-directed RNA polymerase omega subunit | chromosome | CDS | 2025081 | 213 | - | 0.29108 | |
sigA | transcription initiation factor sigma A | chromosome | CDS | 2298082 | 1122 | - | 0.322638 | |
sigE | probable transcription initiation factor sigma E | chromosome | CDS | 2040448 | 708 | - | 0.285311 | |
sigF | RNA polymerase sigma-F factor | chromosome | CDS | 2339314 | 756 | - | 0.30291 | |
sigG | probable transcription initiation factor sigma G | chromosome | CDS | 2039600 | 813 | - | 0.301353 | |
sigH | RNA polymerase sigma-H factor | chromosome | CDS | 2770748 | 648 | - | 0.280864 | |
sigK | probable transcription initiation factor sigma K | chromosome | CDS | 2046088 | 702 | - | 0.294872 | |
sigL | RNA polymerase sigma factor sigma54 | chromosome | CDS | 1546057 | 1386 | - | 0.28355 | |
sigV | RNA polymerase ECF-type sigma factor | chromosome | CDS | 694087 | 576 | + | 0.241319 | |
sigW | RNA polymerase ECF-type sigma factor | chromosome | CDS | 890124 | 519 | + | 0.279383 | |
spo0J | stage 0 sporulation protein J | chromosome | CDS | 3022236 | 861 | - | 0.271777 | |
spoIIE | stage II sprulation protein E | chromosome | CDS | 2831053 | 2391 | - | 0.282309 | |
treR | probable transcriptional regulator | chromosome | CDS | 699647 | 708 | + | 0.282486 | |
virI | two-component response regulator | chromosome | CDS | 2408055 | 699 | - | 0.280401 | |
virR | two-component response regulator | chromosome | CDS | 1753301 | 711 | - | 0.25879 |