Gene list
Applied filters:
COG category: Transcription
Genomic element: chromosome
Number of genes found: 88
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| Thermus thermophilus HB27, HB27 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | TTC0086 | rrf2 family protein | SubName: Full=Rrf2 family protein; | chromosome | CDS | 76497 | 450 | + | 0.715556 |
| NA | TTC1229 | probable two-component response regulator | SubName: Full=Probable two-component response regulator; | chromosome | CDS | 1191296 | 666 | - | 0.696697 |
| NA | TTC0554 | exoribonuclease II | RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; | chromosome | CDS | 538449 | 2235 | + | 0.688143 |
| NA | TTC0398 | transcriptional repressor | SubName: Full=Transcriptional repressor; | chromosome | CDS | 386259 | 660 | - | 0.690909 |
| NA | TTC1138 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 1107998 | 684 | + | 0.652047 |
| NA | TTC0533 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 514876 | 2937 | + | 0.695948 |
| NA | TTC0643 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 632295 | 723 | + | 0.719225 |
| NA | TTC0617 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome | CDS | 599727 | 342 | + | 0.710526 |
| NA | TTC0329 | transcriptional repressor | SubName: Full=Transcriptional repressor; | chromosome | CDS | 314144 | 1197 | - | 0.740184 |
| NA | TTC1955 | acetyltransferase | SubName: Full=Acetyltransferase; EC=2.3.1.-; | chromosome | CDS | 1861231 | 855 | - | 0.718129 |
| NA | TTC1932 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1842804 | 264 | + | 0.738636 |
| NA | TTC0756 | N utilization substance protein B-like protein | RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; | chromosome | CDS | 739722 | 456 | - | 0.697368 |
| NA | TTC0157 | probable two-component response regulator | SubName: Full=Probable two-component response regulator; | chromosome | CDS | 140053 | 597 | - | 0.695142 |
| NA | TTC1860 | putative regulatory protein | RecName: Full=Transcriptional repressor NrdR; | chromosome | CDS | 1766712 | 462 | - | 0.662338 |
| NA | TTC0043 | alpha-aminodipate aminotransferase | RecName: Full=2-aminoadipate transaminase; EC=2.6.1.39; AltName: Full=2-aminoadipate aminotransferase; AltName: Full=Alpha-aminoadipate aminotransferase; Short=AAA-AT; Short=AadAT; | chromosome | CDS | 39582 | 1194 | - | 0.691792 |
| NA | TTC1818 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 1726080 | 495 | - | 0.69697 |
| NA | TTC1171 | putative ribonuclease | SubName: Full=Putative ribonuclease; | chromosome | CDS | 1137730 | 1800 | + | 0.723889 |
| NA | TTC0349 | N utilization substance protein A | SubName: Full=N utilization substance protein A; | chromosome | CDS | 334862 | 1164 | - | 0.662371 |
| NA | TTC0700 | transcription termination factor rho | RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; | chromosome | CDS | 684635 | 1281 | - | 0.67057 |
| NA | TTC0918 | protein kinase-like protein | SubName: Full=Protein kinase-like protein; | chromosome | CDS | 897267 | 783 | + | 0.713921 |
| NA | TTC0987 | transcriptional regulatory protein | SubName: Full=Transcriptional regulatory protein; | chromosome | CDS | 969256 | 648 | - | 0.660494 |
| NA | TTC0243 | fibronectin/fibrinogen-binding protein | SubName: Full=Fibronectin/fibrinogen-binding protein; | chromosome | CDS | 229654 | 1551 | - | 0.700193 |
| NA | TTC1737 | transcription factor | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome | CDS | 1651521 | 555 | + | 0.661261 |
| NA | TTC1010 | integral membrane protein/HD-hydrolase domain | SubName: Full=Integral membrane protein/HD-hydrolase domain; | chromosome | CDS | 988622 | 1413 | + | 0.647558 |
| NA | TTC1355 | guanosine-3',5'-bis(diphosphate)3'-pyrophosphohy drolase | SubName: Full=Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase; EC=3.1.7.2; | chromosome | CDS | 1288364 | 2184 | + | 0.692766 |
| NA | TTC0985 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 967412 | 843 | - | 0.739027 |
| NA | TTC0176 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 159510 | 237 | + | 0.620253 |
| NA | TTC0668 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 655109 | 579 | + | 0.728843 |
| NA | TTC1008 | conserved hypothetical protein | RecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; | chromosome | CDS | 986771 | 759 | + | 0.700922 |
| NA | TTC0633 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 619238 | 969 | + | 0.716202 |
| NA | TTC1026 | conserved hypothetical protein | RecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; | chromosome | CDS | 1004121 | 765 | - | 0.712418 |
| NA | TTC1978 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 1883007 | 672 | + | 0.69494 |
| NA | TTC0777 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 759267 | 357 | - | 0.714286 |
| NA | TTC1626 | cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 1546583 | 207 | - | 0.618357 |
| NA | TTC1688 | glucokinase | SubName: Full=Glucokinase; EC=2.7.1.2; | chromosome | CDS | 1604234 | 909 | - | 0.746975 |
| NA | TTC0997 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 976826 | 684 | + | 0.700292 |
| NA | TTC1300 | DNA-directed RNA polymerase alpha chain | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome | CDS | 1252579 | 948 | - | 0.672996 |
| NA | TTC1230 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.11.1; | chromosome | CDS | 1191943 | 1959 | - | 0.717713 |
| NA | TTC1360 | transcriptional regulatory protein | SubName: Full=Transcriptional regulatory protein; | chromosome | CDS | 1293866 | 678 | + | 0.669617 |
| NA | TTC1599 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1514846 | 495 | - | 0.733333 |
| NA | TTC1461 | DNA-directed RNA polymerase beta chain | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 1382492 | 3360 | - | 0.687202 |
| NA | TTC1810 | acetyltransferase | SubName: Full=Acetyltransferase; EC=2.3.1.-; | chromosome | CDS | 1719967 | 474 | - | 0.700422 |
| NA | TTC0373 | membrane-bound protein lytR | SubName: Full=Membrane-bound protein lytR; | chromosome | CDS | 358286 | 1146 | + | 0.732112 |
| NA | TTC0462 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 449024 | 363 | - | 0.702479 |
| NA | TTC0455 | transcriptional repressor | SubName: Full=Transcriptional repressor; | chromosome | CDS | 441668 | 1083 | - | 0.710065 |
| NA | TTC0436 | acetyltransferase | SubName: Full=Acetyltransferase; | chromosome | CDS | 424953 | 618 | - | 0.729773 |
| NA | TTC0296 | probable transcriptional regulator | SubName: Full=Probable transcriptional regulator; | chromosome | CDS | 284517 | 603 | + | 0.726368 |
| NA | TTC1460 | DNA-directed RNA polymerase beta' chain | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 1377888 | 4542 | - | 0.682078 |
| NA | TTC1194 | transcriptional repressor | RecName: Full=Arginine repressor; | chromosome | CDS | 1158210 | 495 | - | 0.709091 |
| NA | TTC1218 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 1180840 | 909 | - | 0.672167 |
| NA | TTC0848 | acetyltransferase | SubName: Full=Acetyltransferase; EC=2.3.1.-; | chromosome | CDS | 824755 | 528 | - | 0.67803 |
| NA | TTC0438 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome | CDS | 426639 | 534 | - | 0.722846 |
| NA | TTC1819 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 1726571 | 570 | - | 0.696491 |
| NA | TTC0880 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 854041 | 306 | - | 0.69281 |
| NA | TTC1817 | hypothetical conserved protein | SubName: Full=Hypothetical conserved protein; | chromosome | CDS | 1725339 | 567 | + | 0.673721 |
| NA | TTC0587 | hypothetical conserved protein | SubName: Full=Hypothetical conserved protein; | chromosome | CDS | 569809 | 435 | + | 0.731034 |
| NA | TTC0280 | lipopolysaccharideN-acetylglucosaminyltransferase | SubName: Full=Lipopolysaccharide N-acetylglucosaminyltransferase; | chromosome | CDS | 268979 | 1077 | - | 0.532962 |
| NA | TTC1811 | cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 1720514 | 258 | - | 0.655039 |
| NA | TTC1895 | heat resistant RNA dependent ATPase | SubName: Full=Heat resistant RNA dependent ATPase; | chromosome | CDS | 1802867 | 1554 | + | 0.725225 |
| NA | TTC1005 | serine protease-like protein | SubName: Full=Serine protease-like protein; | chromosome | CDS | 984175 | 762 | + | 0.724409 |
| NA | TTC0348 | hypothetical conserved protein | SubName: Full=Hypothetical conserved protein; | chromosome | CDS | 334590 | 276 | - | 0.692029 |
| NA | TTC1616 | phage shock protein A | SubName: Full=Phage shock protein A; | chromosome | CDS | 1532630 | 663 | - | 0.674208 |
| asnC | TTC0493 | transcriptional regulatory protein, asnC family | SubName: Full=Transcriptional regulatory protein, asnC family; | chromosome | CDS | 481852 | 279 | - | 0.698925 |
| clR | TTC0131 | transcriptional regulator, IclR family | SubName: Full=Transcriptional regulator, IclR family; | chromosome | CDS | 116351 | 825 | + | 0.710303 |
| dnaJ | TTC1124 | dnaJ/dnaK assembly factor dafA | SubName: Full=DnaJ/dnaK assembly factor dafA; | chromosome | CDS | 1092580 | 237 | - | 0.675106 |
| gntR | TTC1215 | putative transcriptional regulator, gntR family protein | SubName: Full=Putative transcriptional regulator, gntR family protein; | chromosome | CDS | 1177975 | 663 | - | 0.722474 |
| greA | TTC0257 | transcription elongation factor greA | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 248179 | 468 | + | 0.655983 |
| greA | TTC0680 | anti-cleavage anti-greA transcription factor gfh1 | RecName: Full=Transcription inhibitor protein Gfh1; AltName: Full=Anti-cleavage anti-GreA transcription factor; AltName: Full=Gre factor homolog 1; | chromosome | CDS | 664398 | 471 | - | 0.679406 |
| hrcA | TTC1948 | heat-inducible transcription repressor hrcA | RecName: Full=Heat-inducible transcription repressor hrcA; | chromosome | CDS | 1854935 | 903 | - | 0.726467 |
| lysR | TTC1800 | transcriptional regulatory protein, lysR family | SubName: Full=Transcriptional regulatory protein, lysR family; | chromosome | CDS | 1705811 | 858 | - | 0.731935 |
| lysR | TTC1871 | transcriptional regulatory protein, lysR family (hydrogen peroxide-inducible genes activator) | SubName: Full=Transcriptional regulatory protein, lysR family (Hydrogen peroxide-inducible genes activator); | chromosome | CDS | 1773482 | 954 | - | 0.684486 |
| lytR | TTC1419 | membrane-bound protein lytR | SubName: Full=Membrane-bound protein lytR; | chromosome | CDS | 1343612 | 1098 | - | 0.735883 |
| marR | TTC0381 | transcriptional regulator, marR family | SubName: Full=Transcriptional regulator, marR family; | chromosome | CDS | 370367 | 435 | - | 0.712644 |
| marR | TTC0626 | probable transcriptional regulator, marR family | SubName: Full=Probable transcriptional regulator, marR family; | chromosome | CDS | 610610 | 417 | - | 0.738609 |
| marR | TTC1830 | transcriptional regulators, marR/emrR family | SubName: Full=Transcriptional regulators, marR/emrR family; | chromosome | CDS | 1739689 | 297 | - | 0.710438 |
| merR | TTC0132 | probable transcriptional regulator, merR family | SubName: Full=Probable transcriptional regulator, merR family; | chromosome | CDS | 117218 | 696 | + | 0.66523 |
| merR | TTC0791 | transcriptional regulator, merR family | SubName: Full=Transcriptional regulator, merR family; | chromosome | CDS | 773178 | 429 | - | 0.708625 |
| parB | TTC1604 | chromosome partitioning protein parB | RecName: Full=Chromosome-partitioning protein Spo0J; | chromosome | CDS | 1518889 | 810 | - | 0.727161 |
| phaN | TTC1515 | phaN | SubName: Full=PhaN; | chromosome | CDS | 1437987 | 783 | - | 0.704981 |
| phoB | TTC1849 | phosphate regulon transcriptional regulatory protein phoB | SubName: Full=Phosphate regulon transcriptional regulatory protein phoB; | chromosome | CDS | 1755863 | 672 | + | 0.74256 |
| recG | TTC0902 | DNA helicase recG | SubName: Full=DNA helicase recG; EC=3.6.1.-; | chromosome | CDS | 882252 | 2313 | + | 0.695633 |
| recG | TTC1951 | ATP-dependent DNA helicase recG-related protein | SubName: Full=ATP-dependent DNA helicase recG-related protein; EC=3.6.1.-; | chromosome | CDS | 1857745 | 1536 | + | 0.710938 |
| rpoD | TTC0164 | RNA polymerase sigma factor rpoD | RecName: Full=RNA polymerase sigma factor SigA; | chromosome | CDS | 144755 | 1272 | - | 0.665094 |
| rpoZ | TTC1196 | RNA polymerase-associated protein rpoZ, omega subunit | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome | CDS | 1159911 | 300 | - | 0.636667 |
| smtB | TTC0353 | transcriptional repressor smtB | SubName: Full=Transcriptional repressor smtB; | chromosome | CDS | 339235 | 372 | + | 0.701613 |
| tetR | TTC0239 | transcriptional regulator, tetR family | SubName: Full=Transcriptional regulator, tetR family; | chromosome | CDS | 226575 | 576 | - | 0.678819 |
| tetR | TTC0609 | transcriptional regulator, tetR family | SubName: Full=Transcriptional regulator, tetR family; | chromosome | CDS | 591472 | 612 | - | 0.683007 |
| tetR | TTC1903 | transcriptional regulator, tetR family | SubName: Full=Transcriptional regulator, tetR family; | chromosome | CDS | 1810193 | 618 | + | 0.68932 |
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