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Gene list

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COG category: Transcription
Genomic element: chromosome

Number of genes found: 88

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Thermus thermophilus HB27, HB27
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA TTC1461 DNA-directed RNA polymerase beta chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1382492 3360 - 0.687202
NA TTC1026 conserved hypothetical proteinRecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; chromosome CDS1004121 765 - 0.712418
NA TTC0777 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS759267 357 - 0.714286
NA TTC0243 fibronectin/fibrinogen-binding proteinSubName: Full=Fibronectin/fibrinogen-binding protein; chromosome CDS229654 1551 - 0.700193
NA TTC1005 serine protease-like proteinSubName: Full=Serine protease-like protein; chromosome CDS984175 762 + 0.724409
NA TTC0997 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS976826 684 + 0.700292
NA TTC0554 exoribonuclease IIRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; chromosome CDS538449 2235 + 0.688143
NA TTC1737 transcription factorRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS1651521 555 + 0.661261
NA TTC1138 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1107998 684 + 0.652047
NA TTC0668 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS655109 579 + 0.728843
NA TTC0756 N utilization substance protein B-like proteinRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS739722 456 - 0.697368
NA TTC1688 glucokinaseSubName: Full=Glucokinase; EC=2.7.1.2; chromosome CDS1604234 909 - 0.746975
NA TTC1599 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1514846 495 - 0.733333
NA TTC0280 lipopolysaccharideN-acetylglucosaminyltransferaseSubName: Full=Lipopolysaccharide N-acetylglucosaminyltransferase; chromosome CDS268979 1077 - 0.532962
NA TTC1218 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS1180840 909 - 0.672167
NA TTC0329 transcriptional repressorSubName: Full=Transcriptional repressor; chromosome CDS314144 1197 - 0.740184
NA TTC1010 integral membrane protein/HD-hydrolase domainSubName: Full=Integral membrane protein/HD-hydrolase domain; chromosome CDS988622 1413 + 0.647558
NA TTC1811 cold shock proteinSubName: Full=Cold shock protein; chromosome CDS1720514 258 - 0.655039
NA TTC1819 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS1726571 570 - 0.696491
NA TTC1460 DNA-directed RNA polymerase beta' chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1377888 4542 - 0.682078
NA TTC0985 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS967412 843 - 0.739027
NA TTC1978 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1883007 672 + 0.69494
NA TTC0176 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS159510 237 + 0.620253
NA TTC0348 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS334590 276 - 0.692029
NA TTC1008 conserved hypothetical proteinRecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; chromosome CDS986771 759 + 0.700922
NA TTC0455 transcriptional repressorSubName: Full=Transcriptional repressor; chromosome CDS441668 1083 - 0.710065
NA TTC1626 cold shock proteinSubName: Full=Cold shock protein; chromosome CDS1546583 207 - 0.618357
NA TTC0700 transcription termination factor rhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS684635 1281 - 0.67057
NA TTC0157 probable two-component response regulatorSubName: Full=Probable two-component response regulator; chromosome CDS140053 597 - 0.695142
NA TTC1230 serine/threonine protein kinaseSubName: Full=Serine/threonine protein kinase; EC=2.7.11.1; chromosome CDS1191943 1959 - 0.717713
NA TTC0587 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS569809 435 + 0.731034
NA TTC1955 acetyltransferaseSubName: Full=Acetyltransferase; EC=2.3.1.-; chromosome CDS1861231 855 - 0.718129
NA TTC1895 heat resistant RNA dependent ATPaseSubName: Full=Heat resistant RNA dependent ATPase; chromosome CDS1802867 1554 + 0.725225
NA TTC1810 acetyltransferaseSubName: Full=Acetyltransferase; EC=2.3.1.-; chromosome CDS1719967 474 - 0.700422
NA TTC0438 hypothetical cytosolic proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS426639 534 - 0.722846
NA TTC1932 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1842804 264 + 0.738636
NA TTC1818 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS1726080 495 - 0.69697
NA TTC1300 DNA-directed RNA polymerase alpha chainRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS1252579 948 - 0.672996
NA TTC0296 probable transcriptional regulatorSubName: Full=Probable transcriptional regulator; chromosome CDS284517 603 + 0.726368
NA TTC0373 membrane-bound protein lytRSubName: Full=Membrane-bound protein lytR; chromosome CDS358286 1146 + 0.732112
NA TTC0633 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS619238 969 + 0.716202
NA TTC0398 transcriptional repressorSubName: Full=Transcriptional repressor; chromosome CDS386259 660 - 0.690909
NA TTC0643 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS632295 723 + 0.719225
NA TTC1817 hypothetical conserved proteinSubName: Full=Hypothetical conserved protein; chromosome CDS1725339 567 + 0.673721
NA TTC0848 acetyltransferaseSubName: Full=Acetyltransferase; EC=2.3.1.-; chromosome CDS824755 528 - 0.67803
NA TTC0918 protein kinase-like proteinSubName: Full=Protein kinase-like protein; chromosome CDS897267 783 + 0.713921
NA TTC0987 transcriptional regulatory proteinSubName: Full=Transcriptional regulatory protein; chromosome CDS969256 648 - 0.660494
NA TTC1355 guanosine-3',5'-bis(diphosphate)3'-pyrophosphohy drolaseSubName: Full=Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase; EC=3.1.7.2; chromosome CDS1288364 2184 + 0.692766
NA TTC0086 rrf2 family proteinSubName: Full=Rrf2 family protein; chromosome CDS76497 450 + 0.715556
NA TTC0349 N utilization substance protein ASubName: Full=N utilization substance protein A; chromosome CDS334862 1164 - 0.662371
NA TTC1194 transcriptional repressorRecName: Full=Arginine repressor; chromosome CDS1158210 495 - 0.709091
NA TTC1171 putative ribonucleaseSubName: Full=Putative ribonuclease; chromosome CDS1137730 1800 + 0.723889
NA TTC0880 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS854041 306 - 0.69281
NA TTC0043 alpha-aminodipate aminotransferaseRecName: Full=2-aminoadipate transaminase; EC=2.6.1.39; AltName: Full=2-aminoadipate aminotransferase; AltName: Full=Alpha-aminoadipate aminotransferase; Short=AAA-AT; Short=AadAT; chromosome CDS39582 1194 - 0.691792
NA TTC0617 hypothetical cytosolic proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS599727 342 + 0.710526
NA TTC1616 phage shock protein ASubName: Full=Phage shock protein A; chromosome CDS1532630 663 - 0.674208
NA TTC0462 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS449024 363 - 0.702479
NA TTC0533 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS514876 2937 + 0.695948
NA TTC0436 acetyltransferaseSubName: Full=Acetyltransferase; chromosome CDS424953 618 - 0.729773
NA TTC1360 transcriptional regulatory proteinSubName: Full=Transcriptional regulatory protein; chromosome CDS1293866 678 + 0.669617
NA TTC1860 putative regulatory proteinRecName: Full=Transcriptional repressor NrdR; chromosome CDS1766712 462 - 0.662338
NA TTC1229 probable two-component response regulatorSubName: Full=Probable two-component response regulator; chromosome CDS1191296 666 - 0.696697
asnC TTC0493 transcriptional regulatory protein, asnC familySubName: Full=Transcriptional regulatory protein, asnC family; chromosome CDS481852 279 - 0.698925
clR TTC0131 transcriptional regulator, IclR familySubName: Full=Transcriptional regulator, IclR family; chromosome CDS116351 825 + 0.710303
dnaJ TTC1124 dnaJ/dnaK assembly factor dafASubName: Full=DnaJ/dnaK assembly factor dafA; chromosome CDS1092580 237 - 0.675106
gntR TTC1215 putative transcriptional regulator, gntR family proteinSubName: Full=Putative transcriptional regulator, gntR family protein; chromosome CDS1177975 663 - 0.722474
greA TTC0257 transcription elongation factor greARecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS248179 468 + 0.655983
greA TTC0680 anti-cleavage anti-greA transcription factor gfh1RecName: Full=Transcription inhibitor protein Gfh1; AltName: Full=Anti-cleavage anti-GreA transcription factor; AltName: Full=Gre factor homolog 1; chromosome CDS664398 471 - 0.679406
hrcA TTC1948 heat-inducible transcription repressor hrcARecName: Full=Heat-inducible transcription repressor hrcA; chromosome CDS1854935 903 - 0.726467
lysR TTC1871 transcriptional regulatory protein, lysR family (hydrogen peroxide-inducible genes activator)SubName: Full=Transcriptional regulatory protein, lysR family (Hydrogen peroxide-inducible genes activator); chromosome CDS1773482 954 - 0.684486
lysR TTC1800 transcriptional regulatory protein, lysR familySubName: Full=Transcriptional regulatory protein, lysR family; chromosome CDS1705811 858 - 0.731935
lytR TTC1419 membrane-bound protein lytRSubName: Full=Membrane-bound protein lytR; chromosome CDS1343612 1098 - 0.735883
marR TTC0381 transcriptional regulator, marR familySubName: Full=Transcriptional regulator, marR family; chromosome CDS370367 435 - 0.712644
marR TTC0626 probable transcriptional regulator, marR familySubName: Full=Probable transcriptional regulator, marR family; chromosome CDS610610 417 - 0.738609
marR TTC1830 transcriptional regulators, marR/emrR familySubName: Full=Transcriptional regulators, marR/emrR family; chromosome CDS1739689 297 - 0.710438
merR TTC0791 transcriptional regulator, merR familySubName: Full=Transcriptional regulator, merR family; chromosome CDS773178 429 - 0.708625
merR TTC0132 probable transcriptional regulator, merR familySubName: Full=Probable transcriptional regulator, merR family; chromosome CDS117218 696 + 0.66523
parB TTC1604 chromosome partitioning protein parBRecName: Full=Chromosome-partitioning protein Spo0J; chromosome CDS1518889 810 - 0.727161
phaN TTC1515 phaNSubName: Full=PhaN; chromosome CDS1437987 783 - 0.704981
phoB TTC1849 phosphate regulon transcriptional regulatory protein phoBSubName: Full=Phosphate regulon transcriptional regulatory protein phoB; chromosome CDS1755863 672 + 0.74256
recG TTC1951 ATP-dependent DNA helicase recG-related proteinSubName: Full=ATP-dependent DNA helicase recG-related protein; EC=3.6.1.-; chromosome CDS1857745 1536 + 0.710938
recG TTC0902 DNA helicase recGSubName: Full=DNA helicase recG; EC=3.6.1.-; chromosome CDS882252 2313 + 0.695633
rpoD TTC0164 RNA polymerase sigma factor rpoDRecName: Full=RNA polymerase sigma factor SigA; chromosome CDS144755 1272 - 0.665094
rpoZ TTC1196 RNA polymerase-associated protein rpoZ, omega subunitRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS1159911 300 - 0.636667
smtB TTC0353 transcriptional repressor smtBSubName: Full=Transcriptional repressor smtB; chromosome CDS339235 372 + 0.701613
tetR TTC0239 transcriptional regulator, tetR familySubName: Full=Transcriptional regulator, tetR family; chromosome CDS226575 576 - 0.678819
tetR TTC0609 transcriptional regulator, tetR familySubName: Full=Transcriptional regulator, tetR family; chromosome CDS591472 612 - 0.683007
tetR TTC1903 transcriptional regulator, tetR familySubName: Full=Transcriptional regulator, tetR family; chromosome CDS1810193 618 + 0.68932