Gene list
Applied filters:
COG category: Transcription
Genomic element: chromosome
Number of genes found: 251
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| Yersinia pestis biovar Medievalis str. 91001, 91001 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | YP3714 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4228973 | 2448 | + | 0.35335 |
| NA | YP0446 | putative exported protein | SubName: Full=Putative exported protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 471134 | 489 | - | 0.476483 |
| NA | YP3240 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3613441 | 438 | - | 0.484018 |
| NA | YP0747 | Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains | RecName: Full=Transcriptional repressor NrdR; | chromosome | CDS | 808567 | 450 | + | 0.48 |
| NA | YP2786 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3094720 | 261 | + | 0.494253 |
| NA | YP1776 | Predicted transcriptional regulators | SubName: Full=Predicted transcriptional regulators; | chromosome | CDS | 1968951 | 513 | + | 0.45809 |
| NA | YP2557 | Predicted transcriptional regulator | RecName: Full=HTH-type transcriptional regulator IscR; | chromosome | CDS | 2832073 | 558 | + | 0.503584 |
| NA | YP3854 | putative ribonuclease inhibitor | SubName: Full=Putative ribonuclease inhibitor; SubName: Full=Uncharacterized protein; | chromosome | CDS | 4380228 | 282 | - | 0.453901 |
| NA | YP3341 | putative regulatory protein | SubName: Full=Putative regulatory protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 3738354 | 1128 | + | 0.473404 |
| NA | YP0535 | Predicted transcriptional regulator | RecName: Full=HTH-type transcriptional repressor NsrR; | chromosome | CDS | 574546 | 477 | + | 0.444444 |
| NA | YP3506 | Putative transcriptional regulator | RecName: Full=UPF0301 protein YPO0936/y3322/YP_3506; | chromosome | CDS | 3991753 | 666 | - | 0.462462 |
| NA | YP1937 | putative phage protein | SubName: Full=Putative phage protein; | chromosome | CDS | 2151244 | 564 | + | 0.429078 |
| NA | YP2552 | putative RNA-binding protein | SubName: Full=Putative RNA-binding protein; | chromosome | CDS | 2826996 | 1362 | - | 0.469163 |
| NA | YP0857 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 927378 | 183 | - | 0.442623 |
| NA | YP3047 | putative regulatory protein | SubName: Full=Putative regulatory protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 3384286 | 1047 | - | 0.452722 |
| NA | YP1069 | putative DNA-binding prophage protein | SubName: Full=Putative DNA-binding prophage protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 1147538 | 321 | - | 0.461059 |
| NA | YP3987 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; SubName: Full=Uncharacterized protein; | chromosome | CDS | 4537798 | 645 | - | 0.534884 |
| NA | YP3561 | Predicted transcriptional regulators | SubName: Full=Predicted transcriptional regulators; SubName: Full=Uncharacterized protein; | chromosome | CDS | 4056991 | 681 | + | 0.511013 |
| NA | YP0135 | Predicted RNA binding protein, Contains S1 domain | SubName: Full=Predicted RNA binding protein, Contains S1 domain; SubName: Full=Uncharacterized protein; | chromosome | CDS | 145861 | 2376 | - | 0.541667 |
| NA | YP0859 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 928133 | 648 | - | 0.422839 |
| aRO81 | YP1678 | putative aminotransferase | SubName: Full=Putative aminotransferase; | chromosome | CDS | 1849805 | 1188 | + | 0.472222 |
| aRO82 | YP1705 | putative GntR-family regulatory protein | SubName: Full=Multi modular putative transcriptional regulator also putative ATP-binding component of a transport system; SubName: Full=Putative GntR-family regulatory protein; | chromosome | CDS | 1884395 | 1449 | + | 0.509317 |
| aRO83 | YP2712 | putative GntR-family regulatory protein | SubName: Full=Putative GntR-family regulatory protein; SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3006687 | 1506 | + | 0.545153 |
| acrR1 | YP0494 | putative TetR-family regulatory protein | SubName: Full=Putative TetR-family regulatory protein; | chromosome | CDS | 530002 | 576 | - | 0.498264 |
| acrR2 | YP0800 | putative tetR-family transcriptional regulatory protein | SubName: Full=AcrAB operon repressor; SubName: Full=Putative tetR-family transcriptional regulatory protein; | chromosome | CDS | 864717 | 657 | + | 0.432268 |
| acrR3 | YP0974 | Transcriptional regulator | SubName: Full=Putative transcription regulator YbiH; SubName: Full=Transcriptional regulator; | chromosome | CDS | 1048874 | 711 | + | 0.492264 |
| acrR4 | YP2164 | TetR-family transcriptional regulatory protein | SubName: Full=TetR-family transcriptional regulatory protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 2407715 | 600 | + | 0.503333 |
| acrR5 | YP3135 | TetR-family transcriptional regulatory protein | RecName: Full=HTH-type transcriptional repressor FabR; | chromosome | CDS | 3495213 | 648 | + | 0.513889 |
| acrR6 | YP3207 | putative TetR-family regulatory protein | SubName: Full=Putative TetR-family regulatory protein; SubName: Full=Transcriptional regulator; | chromosome | CDS | 3579637 | 687 | - | 0.491994 |
| agaR | YP3527 | DeoR-family regulatory protein | SubName: Full=DeoR-family regulatory protein; SubName: Full=Putative DEOR-type transcriptional regulator of aga operon; | chromosome | CDS | 4016161 | 777 | + | 0.478764 |
| alpA1 | YP1064 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 1144410 | 201 | + | 0.402985 |
| alpA2 | YP1646 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1795459 | 282 | - | 0.43617 |
| alpA3 | YP3576 | putative regulatory protein | SubName: Full=Putative regulatory protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 4068971 | 201 | + | 0.41791 |
| araC1 | YP0413 | putative AraC-family regulatory protein | SubName: Full=Putative AraC-family regulatory protein; | chromosome | CDS | 441523 | 708 | + | 0.416667 |
| araC2 | YP1478 | AraC-family transcriptional regulatory protein | SubName: Full=AraC-family transcriptional regulatory protein; | chromosome | CDS | 1639340 | 387 | - | 0.418605 |
| araC3 | YP1556 | putative AraC-family transcriptional regulatory protein | SubName: Full=Putative AraC-family transcriptional regulatory protein; SubName: Full=Putative AraC-type regulatory protein; | chromosome | CDS | 1705437 | 879 | + | 0.433447 |
| araC4 | YP2041 | putative AraC-family transcriptional regulatory protein | SubName: Full=Putative AraC-family transcriptional regulatory protein; | chromosome | CDS | 2265171 | 906 | + | 0.432671 |
| araC5 | YP2401 | putative AraC-family regulatory protein | SubName: Full=Putative AraC-family regulatory protein; | chromosome | CDS | 2669307 | 786 | - | 0.48855 |
| araC6 | YP2994 | AraC-family regulatory protein | SubName: Full=AraC-family regulatory protein; SubName: Full=Putative AraC-type regulatory protein; | chromosome | CDS | 3333111 | 894 | + | 0.485459 |
| araC7 | YP3780 | putative transcriptional regulator | SubName: Full=Putative AraC-type regulatory protein; SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 4305839 | 876 | - | 0.400685 |
| araC8 | YP3928 | putative araC-family transcriptional regulatory protein | SubName: Full=Putative AraC-like regulator; SubName: Full=Putative araC-family transcriptional regulatory protein; | chromosome | CDS | 4466893 | 942 | - | 0.461783 |
| arcA | YP3725 | aerobic respiration control protein | SubName: Full=Aerobic respiration control protein; SubName: Full=Negative response regulator of genes in aerobic pathways, sensors, ArcB and CpxA; | chromosome | CDS | 4242747 | 717 | + | 0.481172 |
| argR | YP0566 | arginine repressor | RecName: Full=Arginine repressor; | chromosome | CDS | 607046 | 471 | - | 0.452229 |
| arsR1 | YP0341 | arsenical resistance operon repressor | SubName: Full=Arsenical resistance operon repressor; SubName: Full=Transcriptional repressor of chromosomal ars operon; | chromosome | CDS | 358339 | 342 | - | 0.48538 |
| arsR2 | YP1544 | Predicted transcriptional regulators | SubName: Full=Predicted transcriptional regulators; SubName: Full=Uncharacterized protein; | chromosome | CDS | 1695412 | 396 | + | 0.44697 |
| asnC | YP0002 | regulatory protein | SubName: Full=Regulator for asnA, asnC and gidA; SubName: Full=Regulatory protein; | chromosome | CDS | 554 | 462 | - | 0.415584 |
| basR | YP0576 | two-component system response regulator | SubName: Full=Transcriptional regulatory protein, member of 2-component regulatory system; SubName: Full=Two-component system response regulator; | chromosome | CDS | 615480 | 663 | - | 0.493213 |
| betI | YP0992 | TetR-family regulatory protein | RecName: Full=HTH-type transcriptional regulator BetI; | chromosome | CDS | 1070002 | 621 | + | 0.497585 |
| bolA2 | YP3825 | BolA-like protein | SubName: Full=BolA-like protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 4355175 | 264 | - | 0.44697 |
| celD | YP2483 | cel operon repressor | SubName: Full=Cel operon repressor; | chromosome | CDS | 2753903 | 843 | + | 0.408066 |
| citB1 | YP0408 | putative two-component response regulator | SubName: Full=Putative two-component response regulator; SubName: Full=Response regulator/transcription activator; | chromosome | CDS | 434753 | 633 | - | 0.450237 |
| citB2 | YP1122 | putative LuxR-family regulatory proteins | SubName: Full=Putative LuxR-family regulatory proteins; SubName: Full=Putative regulatory protein; | chromosome | CDS | 1202971 | 618 | - | 0.357605 |
| citB3 | YP2582 | putative luxR-family regulatory protein | SubName: Full=Putative luxR-family regulatory protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 2861795 | 603 | - | 0.351575 |
| cobB | YP1760 | putative Sir2 family protein | RecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; | chromosome | CDS | 1950860 | 837 | + | 0.481481 |
| copR | YP1848 | transcriptional activator | SubName: Full=Putative 2-component transcriptional regulator; SubName: Full=Transcriptional activator; | chromosome | CDS | 2058865 | 693 | - | 0.520923 |
| cpxR1 | YP0074 | two component system response regulatory protein | SubName: Full=Transcriptional regulator in 2-component system; SubName: Full=Two component system response regulatory protein; | chromosome | CDS | 83406 | 723 | - | 0.497925 |
| cpxR2 | YP2623 | putative two-component system response regulator | SubName: Full=Putative two-component system response regulator; SubName: Full=Transcriptional regulator in 2-component system; | chromosome | CDS | 2906737 | 684 | - | 0.475146 |
| creB | YP3592 | putative response regulator | SubName: Full=Catabolic regulation response regulator; SubName: Full=Putative response regulator; | chromosome | CDS | 4086611 | 702 | - | 0.497151 |
| csgD | YP2269 | putative LuxR-family regulatory protein | SubName: Full=Putative LuxR-family regulatory protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 2518409 | 642 | + | 0.376947 |
| cspB | YP2460 | cold shock protein | RecName: Full=Cold shock-like protein CspB; | chromosome | CDS | 2731925 | 243 | + | 0.386831 |
| cspC1 | YP1121 | putative cold-shock protein | SubName: Full=Putative cold-shock protein; | chromosome | CDS | 1202169 | 483 | + | 0.360248 |
| cspC2 | YP1486 | cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 1646308 | 210 | + | 0.442857 |
| cspC3 | YP1786 | cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 1980037 | 213 | + | 0.460094 |
| cspD | YP1228 | cold shock-like protein | SubName: Full=Cold shock-like protein; | chromosome | CDS | 1341361 | 264 | + | 0.469697 |
| cspE1 | YP1120 | putative cold shock protein | SubName: Full=Cold shock protein; SubName: Full=Putative cold shock protein; | chromosome | CDS | 1201684 | 255 | - | 0.411765 |
| cspE2 | YP1195 | cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 1293859 | 234 | - | 0.440171 |
| cspI | YP3904 | cold shock-like protein | SubName: Full=Cold shock-like protein; | chromosome | CDS | 4439421 | 288 | + | 0.440972 |
| cspa1 | YP3903 | major cold shock protein Cspa1 | SubName: Full=Major cold shock protein Cspa1; | chromosome | CDS | 4439024 | 213 | + | 0.441315 |
| cueR | YP0839 | putative regulatory protein | RecName: Full=HTH-type transcriptional regulator CueR; AltName: Full=Copper efflux regulator; AltName: Full=Copper export regulator; | chromosome | CDS | 912315 | 420 | + | 0.464286 |
| cysB | YP2017 | cys regulon transcriptional activator | SubName: Full=Cys regulon transcriptional activator; SubName: Full=Positive transcriptional regulator for cysteine regulon; | chromosome | CDS | 2239894 | 975 | + | 0.465641 |
| cytR1 | YP0110 | transcriptional repressor | SubName: Full=Regulator for deo operon, udp, cdd, tsx, nupC, and nupG; SubName: Full=Transcriptional repressor; | chromosome | CDS | 116883 | 1029 | - | 0.48105 |
| cytR2 | YP3443 | putative transcription repressor | SubName: Full=Putative transcription repressor; | chromosome | CDS | 3909446 | 1020 | - | 0.453922 |
| dbpA | YP1617 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; | chromosome | CDS | 1765122 | 1383 | - | 0.501085 |
| deaD | YP0595 | inducible ATP-independent RNA helicase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 636422 | 2010 | + | 0.535323 |
| deoR1 | YP0376 | putative transcriptional regulatory protein | SubName: Full=Putative transcriptional regulator; SubName: Full=Putative transcriptional regulatory protein; | chromosome | CDS | 398821 | 945 | - | 0.478307 |
| deoR2 | YP2111 | putative transcriptional regulatory protein | SubName: Full=Putative transcriptional regulator; SubName: Full=Putative transcriptional regulatory protein; | chromosome | CDS | 2352202 | 957 | - | 0.53187 |
| deoR3 | YP1270 | deoxyribose operon repressor | SubName: Full=Deoxyribose operon repressor; | chromosome | CDS | 1385108 | 660 | + | 0.45 |
| deoR4 | YP3767 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 4292563 | 921 | - | 0.52443 |
| deoR5 | YP0339 | transcriptional regulatory protein | SubName: Full=Transcriptional regulatory protein; | chromosome | CDS | 355439 | 960 | - | 0.501042 |
| deoR6 | YP1583 | putative transcriptional regulatory protein | SubName: Full=Putative transcriptional regulator; SubName: Full=Putative transcriptional regulatory protein; | chromosome | CDS | 1733025 | 1002 | + | 0.500998 |
| dinG1 | YP0932 | putative ATP-dependent helicase DinG | SubName: Full=Probably ATP-dependent helicase; SubName: Full=Putative ATP-dependent helicase DinG; | chromosome | CDS | 1003560 | 2181 | - | 0.492435 |
| dinG2 | YP1914 | putative DEAD box family helicase | SubName: Full=Putative DEAD box family helicase; | chromosome | CDS | 2132827 | 1395 | + | 0.507527 |
| emrR | YP0666 | MarR-family transcriptional regulatory protein | SubName: Full=MarR-family transcriptional regulatory protein; SubName: Full=Regulator of plasmid mcrB operon (Microcin B17 synthesis); | chromosome | CDS | 720366 | 537 | - | 0.456238 |
| exuR | YP2896 | exu regulon transcriptional regulator | SubName: Full=Exu regulon transcriptional regulator; SubName: Full=Negative regulator of exu regulon, exuT, uxaAC, and uxuB; | chromosome | CDS | 3212517 | 879 | - | 0.444824 |
| fadR1 | YP0011 | putative GntR-famly transcriptional regulator | SubName: Full=Putative GntR-famly transcriptional regulator; SubName: Full=Uncharacterized protein; | chromosome | CDS | 10781 | 690 | - | 0.44058 |
| fadR2 | YP1946 | fatty acid metabolism regulatory protein | RecName: Full=Fatty acid metabolism regulator protein; | chromosome | CDS | 2161505 | 720 | + | 0.4625 |
| fiS | YP3893 | DNA-binding protein Fis | RecName: Full=DNA-binding protein Fis; | chromosome | CDS | 4431346 | 297 | + | 0.464646 |
| fimZ | YP1667 | putative two-component response regulator | SubName: Full=Fimbrial Z protein probable signal transducer; SubName: Full=Putative two-component response regulator; SubName: Full=Similar to Fimbriae Z protein; | chromosome | CDS | 1838775 | 633 | - | 0.401264 |
| flgM | YP1596 | negative regulator of flagellin synthesis | SubName: Full=Anti-FliA factor; SubName: Full=Negative regulator of flagellin synthesis; | chromosome | CDS | 1745745 | 303 | + | 0.475248 |
| fliA1 | YP1550 | RNA polymerase sigma factor for flagellar operon | RecName: Full=RNA polymerase sigma factor FliA; AltName: Full=RNA polymerase sigma factor for flagellar operon; AltName: Full=Sigma F; AltName: Full=Sigma-28; | chromosome | CDS | 1700461 | 723 | - | 0.529737 |
| fliA2 | YP3054 | putative RNA polymerase sigma factor for flagellar operon | SubName: Full=Putative RNA polymerase sigma factor for flagellar operon; | chromosome | CDS | 3391030 | 696 | + | 0.441092 |
| fruR | YP3640 | putative fructose repressor | SubName: Full=Putative fructose repressor; SubName: Full=Transcriptional repressor of fru operon and others; | chromosome | CDS | 4139297 | 1011 | - | 0.531157 |
| galR1 | YP2067 | putative LacI-family transcriptional regulatory protein | SubName: Full=Putative LacI-family transcriptional regulatory protein; SubName: Full=Repressor of galETK operon; | chromosome | CDS | 2298953 | 1017 | - | 0.493609 |
| galR2 | YP2862 | galactose operon repressor | SubName: Full=Galactose operon repressor; | chromosome | CDS | 3175352 | 1185 | - | 0.514768 |
| gcvA | YP2822 | glycine cleavage system transcriptional activator | SubName: Full=Glycine cleavage system transcriptional activator; SubName: Full=Positive regulator of gcv operon; | chromosome | CDS | 3132243 | 918 | - | 0.491285 |
| glpR1 | YP0122 | glycerol-3-phosphate repressor protein | SubName: Full=Glycerol-3-phosphate repressor protein; SubName: Full=Repressor of the glp operon; | chromosome | CDS | 129412 | 759 | - | 0.491436 |
| glpR2 | YP0359 | putative deoR-family regulatory protein | SubName: Full=Putative deoR-family regulatory protein; | chromosome | CDS | 377724 | 810 | - | 0.428395 |
| glpR3 | YP0904 | putative transcriptional regulatory protein | SubName: Full=Putative DEOR-type transcriptional regulator; SubName: Full=Putative transcriptional regulatory protein; | chromosome | CDS | 965951 | 816 | - | 0.482843 |
| glpR4 | YP1680 | probable deoR-family transcriptional regulatory protein | SubName: Full=ORF40; SubName: Full=Probable deoR-family transcriptional regulatory protein; SubName: Full=Putative DEOR-type transcriptional regulator; | chromosome | CDS | 1853439 | 771 | - | 0.500648 |
| gntR | YP3896 | putative GntR-family transcriptional regulatory protein | SubName: Full=Putative GntR-family transcriptional regulatory protein; SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 4432938 | 726 | - | 0.506887 |
| gntR1 | YP3317 | gluconate utilization system Gnt-I transcriptional repressor | SubName: Full=Gluconate utilization system Gnt-I transcriptional repressor; SubName: Full=Regulator of gluconate (Gnt) operon; | chromosome | CDS | 3711540 | 996 | - | 0.521084 |
| greA | YP0578 | transcription elongation factor | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 617854 | 477 | + | 0.42348 |
| greB | YP0136 | transcription elongation factor | RecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; | chromosome | CDS | 148770 | 516 | + | 0.492248 |
| hepA | YP3662 | RNA polymerase associated helicase | RecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; | chromosome | CDS | 4165915 | 2907 | + | 0.519436 |
| hipB1 | YP0598 | putative transcriptional regulatory protein | SubName: Full=Putative transcriptional regulatory protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 639059 | 312 | + | 0.455128 |
| hipB2 | YP2107 | putative DNA-binding phage-related protein | SubName: Full=Putative DNA-binding phage-related protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 2346200 | 324 | - | 0.45679 |
| hipB3 | YP3391 | putative regulator | SubName: Full=Putative regulator; SubName: Full=Uncharacterized protein; | chromosome | CDS | 3802037 | 363 | + | 0.438017 |
| hipB4 | YP3579 | Predicted transcriptional regulators | SubName: Full=Predicted transcriptional regulators; SubName: Full=Uncharacterized protein; | chromosome | CDS | 4072647 | 399 | - | 0.45614 |
| hipB5 | YP3581 | putative DNA binding protein | SubName: Full=Putative DNA binding protein; | chromosome | CDS | 4073505 | 363 | - | 0.440771 |
| hipB6 | YP3937 | putative transcriptional regulatory protein | SubName: Full=Putative transcriptional regulatory protein; SubName: Full=Transcriptional repressor; | chromosome | CDS | 4480011 | 489 | + | 0.433538 |
| hpcR | YP1632 | homoprotocatechuate degradative operon repressor | SubName: Full=Homoprotocatechuate degradative operon repressor; SubName: Full=Putative regulator; | chromosome | CDS | 1782558 | 477 | + | 0.448637 |
| iciA | YP3613 | replication initiation inhibitor | RecName: Full=Chromosome initiation inhibitor; AltName: Full=OriC replication inhibitor; | chromosome | CDS | 4110618 | 957 | + | 0.53187 |
| iclR | YP3085 | Transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 3427691 | 843 | + | 0.527877 |
| ilvY | YP3157 | LysR-family transcriptional regulatory protein | SubName: Full=LysR-family transcriptional regulatory protein; SubName: Full=Positive regulator for ilvC; | chromosome | CDS | 3525840 | 885 | - | 0.527684 |
| kdgR | YP1739 | IclR-family transcriptional regulatory protein | SubName: Full=IclR-family transcriptional regulatory protein; SubName: Full=Putative regulator; | chromosome | CDS | 1926106 | 792 | + | 0.441919 |
| kdpE | YP2491 | two-component regulatory protein response regulator KdpE | SubName: Full=Regulator of kdp operon (Transcriptional effector); SubName: Full=Two-component regulatory protein response regulator KdpE; | chromosome | CDS | 2760226 | 630 | - | 0.504762 |
| lacI | YP3546 | lactose operon repressor | SubName: Full=Lactose operon repressor; SubName: Full=Transcriptional repressor of the lac operon; | chromosome | CDS | 4037722 | 1149 | - | 0.482158 |
| leuO | YP3643 | LysR-family transcriptional regulator LeuO | SubName: Full=LysR-family transcriptional regulator LeuO; SubName: Full=Probable transcriptional activator for leuABCD operon; | chromosome | CDS | 4142579 | 969 | + | 0.427245 |
| lexA1 | YP0470 | LexA repressor | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 502526 | 609 | + | 0.505747 |
| lexA2 | YP0908 | putative prophage repressor protein | SubName: Full=Putative phage repressor protein cI; SubName: Full=Putative prophage repressor protein; | chromosome | CDS | 969740 | 723 | + | 0.477178 |
| lrp1 | YP0785 | probable AsnC-family regulatory protein | SubName: Full=Probable AsnC-family regulatory protein; SubName: Full=Putative LRP-like transcriptional regulator; | chromosome | CDS | 848072 | 462 | + | 0.469697 |
| lrp2 | YP1218 | leucine-responsive regulatory protein | SubName: Full=Leucine-responsive regulatory protein; SubName: Full=Regulator protein; | chromosome | CDS | 1329782 | 495 | - | 0.442424 |
| lrp3 | YP1781 | AsnC-family transcriptional regulatory protein | SubName: Full=AsnC-family transcriptional regulatory protein; SubName: Full=Putative regulator; | chromosome | CDS | 1973119 | 450 | - | 0.44 |
| lysR1 | YP0088 | possible transcriptional regulator | SubName: Full=Possible transcriptional regulator; SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 96398 | 1296 | + | 0.492284 |
| lysR10 | YP1951 | LysR-family transcriptional regulatory protein | SubName: Full=LysR-family transcriptional regulatory protein; SubName: Full=Putative regulator; | chromosome | CDS | 2168269 | 933 | + | 0.530547 |
| lysR11 | YP1969 | putative LysR-family transcriptional regulatory protein | SubName: Full=Putative LysR-family transcriptional regulatory protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 2188540 | 861 | + | 0.291521 |
| lysR12 | YP2174 | LysR-family transcriptional regulatory protein | SubName: Full=LysR-family transcriptional regulatory protein; SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 2418660 | 933 | - | 0.501608 |
| lysR13 | YP2277 | putative LysR-family transcriptional regulator | SubName: Full=Putative LysR-family transcriptional regulator; SubName: Full=Uncharacterized protein; | chromosome | CDS | 2525916 | 981 | - | 0.50051 |
| lysR14 | YP2312 | putativeLlysR-family transcriptional regulatory protein | SubName: Full=Putative transcriptional regulator LYSR-type; SubName: Full=PutativeLlysR-family transcriptional regulatory protein; | chromosome | CDS | 2572021 | 942 | + | 0.522293 |
| lysR15 | YP2604 | putative lysR-family transcriptional regulatory protein | SubName: Full=Putative lysR-family transcriptional regulatory protein; SubName: Full=Transcriptional regulator; | chromosome | CDS | 2886089 | 879 | + | 0.514221 |
| lysR16 | YP2858 | LysR-family transcriptional regulatory protein | SubName: Full=LysR-family transcriptional regulatory protein; SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3170503 | 909 | + | 0.49945 |
| lysR17 | YP2860 | positive regulator for lys | SubName: Full=Positive regulator for lys; | chromosome | CDS | 3172937 | 987 | - | 0.509625 |
| lysR18 | YP2948 | LysR-family regulatory protein | SubName: Full=LysR-family regulatory protein; SubName: Full=Putative transcriptional regulators; | chromosome | CDS | 3283630 | 933 | + | 0.554127 |
| lysR19 | YP2984 | LysR-family regulatory protein | SubName: Full=LysR-family regulatory protein; SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 3320877 | 912 | + | 0.530702 |
| lysR2 | YP0431 | putative LysR-family transcriptional regulator | SubName: Full=Putative LysR-family transcriptional regulator; SubName: Full=Uncharacterized protein; | chromosome | CDS | 455132 | 987 | - | 0.383992 |
| lysR20 | YP3144 | LysR-family transcriptional regulatory protein | RecName: Full=HTH-type transcriptional regulator HdfR; AltName: Full=H-NS-dependent flhDC regulator; | chromosome | CDS | 3512088 | 882 | - | 0.475057 |
| lysR21 | YP3798 | lysR-family transcriptional regulatory protein | SubName: Full=LysR-family transcriptional regulatory protein; SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 4324856 | 894 | - | 0.527964 |
| lysR22 | YP3861 | Transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 4386536 | 699 | + | 0.476395 |
| lysR23 | YP3862 | putative lysR-family transcriptional regulatory protein | SubName: Full=Putative lysR-family transcriptional regulatory protein; SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 4387486 | 876 | + | 0.343607 |
| lysR3 | YP0705 | putative LysR-family transcriptional regulatory protein | SubName: Full=Probable LysR-type transcriptional regulatory protein; SubName: Full=Putative LysR-family transcriptional regulatory protein; | chromosome | CDS | 765018 | 912 | + | 0.325658 |
| lysR4 | YP0981 | Transcriptional regulator | SubName: Full=Putative transcriptional regulator; SubName: Full=Transcriptional regulator; | chromosome | CDS | 1055835 | 912 | + | 0.542763 |
| lysR5 | YP0990 | putative LysR-family regulatory protein | SubName: Full=Putative LysR-family regulatory protein; | chromosome | CDS | 1066488 | 894 | - | 0.432886 |
| lysR6 | YP1284 | putative LysR-family transcriptional regulatoryprotein | SubName: Full=Putative LysR-family transcriptional regulatory protein; SubName: Full=Putative LysR-family transcriptional regulatoryprotein; SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 1403601 | 873 | - | 0.507446 |
| lysR7 | YP1393 | putative LysR-family transcriptional regulatory protein | SubName: Full=Putative LysR-family transcriptional regulatory protein; SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 1535238 | 870 | - | 0.53908 |
| lysR8 | YP1671 | probable LysR-family transcriptional regulator | SubName: Full=Probable LysR-family transcriptional regulator; SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 1843089 | 897 | + | 0.508361 |
| lysR9 | YP1676 | putative LysR-family transcriptional regulatory protein | SubName: Full=Putative LysR-family transcriptional regulatory protein; SubName: Full=Putative LysR-type transcriptional regulator; SubName: Full=Similar to hypothetical transcriptional regulator; | chromosome | CDS | 1847614 | 963 | + | 0.505711 |
| lytT | YP0397 | two-component system response regulator | RecName: Full=Uncharacterized response regulatory protein YPO3287/y0902/YP_0397; | chromosome | CDS | 420819 | 774 | - | 0.44832 |
| malT | YP0125 | maltose regulon positive regulatory protein | RecName: Full=HTH-type transcriptional regulator MalT; AltName: Full=ATP-dependent transcriptional activator MalT; | chromosome | CDS | 131763 | 2712 | - | 0.510693 |
| metJ | YP0116 | transcriptional repressor protein | RecName: Full=Met repressor; AltName: Full=Met regulon regulatory protein MetJ; | chromosome | CDS | 122277 | 318 | - | 0.493711 |
| metR | YP3260 | lysR-family transcriptional regulatory protein | SubName: Full=LysR-family transcriptional regulatory protein; SubName: Full=Regulator for metE and metH; | chromosome | CDS | 3634141 | 954 | - | 0.530398 |
| mfd | YP1754 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 1943014 | 3447 | - | 0.51233 |
| mlc | YP2064 | putative ROK family transcriptional regulatory protein | SubName: Full=Putative ROK family transcriptional regulatory protein; | chromosome | CDS | 2294804 | 1218 | + | 0.468801 |
| mtlR | YP3977 | mannitol operon repressor | SubName: Full=Mannitol operon repressor; SubName: Full=Repressor for mtl; | chromosome | CDS | 4526471 | 555 | - | 0.484685 |
| nagC1 | YP0724 | Transcriptional regulators | SubName: Full=Possible NAGC-like transcriptional regulator; SubName: Full=Transcriptional regulators; SubName: Full=Uncharacterized protein; | chromosome | CDS | 780384 | 915 | + | 0.502732 |
| nagC2 | YP1088 | putative N-acetylglucosamine regulatory protein | SubName: Full=Putative N-acetylglucosamine regulatory protein; | chromosome | CDS | 1167746 | 1266 | + | 0.49763 |
| nagC3 | YP1503 | Transcriptional regulators | SubName: Full=Transcriptional regulators; SubName: Full=Uncharacterized protein; | chromosome | CDS | 1660213 | 291 | + | 0.525773 |
| nagC4 | YP1758 | Transcriptional regulators | RecName: Full=N-acetyl-D-glucosamine kinase; EC=2.7.1.59; AltName: Full=GlcNAc kinase; | chromosome | CDS | 1949878 | 789 | + | 0.504436 |
| nagC5 | YP1759 | Transcriptional regulators | SubName: Full=Transcriptional regulators; SubName: Full=Uncharacterized protein; | chromosome | CDS | 1950644 | 168 | + | 0.517857 |
| nagC6 | YP1879 | putative transcriptional regulatory protein | SubName: Full=Putative transcriptional regulator; SubName: Full=Putative transcriptional regulatory protein; | chromosome | CDS | 2088353 | 1155 | + | 0.550649 |
| nagC7 | YP2644 | putative sugar kinase | RecName: Full=N-acetylmannosamine kinase; EC=2.7.1.60; AltName: Full=ManNAc kinase; AltName: Full=N-acetyl-D-mannosamine kinase; | chromosome | CDS | 2932456 | 873 | - | 0.565865 |
| narP | YP2664 | nitrate/nitrite response regulator protein NarP | SubName: Full=Nitrate/nitrite response regulator; SubName: Full=Nitrate/nitrite response regulator protein NarP; | chromosome | CDS | 2953619 | 663 | + | 0.447964 |
| nhaR | YP3709 | transcriptional activator protein NhaR | SubName: Full=Transcriptional activator of nhaA; SubName: Full=Transcriptional activator protein NhaR; | chromosome | CDS | 4222083 | 900 | - | 0.457778 |
| nlp | YP0568 | putative regulator for maltose metabolism | SubName: Full=Putative regulator for maltose metabolism; | chromosome | CDS | 609352 | 276 | - | 0.496377 |
| nlp-2 | YP1143 | putative regulator | SubName: Full=Putative regulator; | chromosome | CDS | 1233552 | 303 | - | 0.481848 |
| nusA | YP0586 | N utilization substance protein A | SubName: Full=N utilization substance protein A; SubName: Full=Transcription pausing L factor; | chromosome | CDS | 625367 | 1506 | + | 0.491368 |
| nusB | YP0750 | N utilization substance protein B | RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; | chromosome | CDS | 810902 | 417 | + | 0.477218 |
| nusG | YP3115 | transcription antitermination protein | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome | CDS | 3468580 | 546 | - | 0.487179 |
| ompR1 | YP0137 | transcriptional regulatory protein | SubName: Full=Response regulator (Sensor, EnvZ); SubName: Full=Transcriptional regulatory protein; | chromosome | CDS | 149421 | 720 | + | 0.522222 |
| ompR2 | YP2633 | putative response regulator | SubName: Full=Putative response regulator; | chromosome | CDS | 2920945 | 708 | + | 0.514124 |
| ompR3 | YP2719 | transcriptional response regulatory protein (sensor BaeS) | SubName: Full=Transcriptional response regulatory protein (Sensor BaeS); | chromosome | CDS | 3020444 | 720 | + | 0.530556 |
| ompR4 | YP3321 | putative response regulator protein | SubName: Full=Putative response regulator protein; | chromosome | CDS | 3714123 | 720 | + | 0.511111 |
| oxyR | YP3133 | oxidative stress transcriptional regulatory protein | SubName: Full=Activator, hydrogen peroxide-inducible genes; SubName: Full=Oxidative stress transcriptional regulatory protein; | chromosome | CDS | 3492707 | 918 | + | 0.488017 |
| pdhR | YP0264 | pyruvate dehydrogenase complex repressor | SubName: Full=Pyruvate dehydrogenase complex repressor; SubName: Full=Transcriptional regulator for pyruvate dehydrogenase complex; | chromosome | CDS | 267226 | 837 | + | 0.505376 |
| pecT | YP2367 | LysR-family transcriptional regulatory protein | SubName: Full=LysR-family transcriptional regulatory protein; | chromosome | CDS | 2635100 | 945 | - | 0.470899 |
| phnF1 | YP0628 | probable gntR-family transcriptional regulatory protein | SubName: Full=Probable gntR-family transcriptional regulatory protein; SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 668969 | 726 | - | 0.567493 |
| phnF2 | YP1504 | GntR-family putative transcriptional regulatory protein | SubName: Full=GntR-family putative transcriptional regulatory protein; SubName: Full=Putative transcriptional regulator of the GntR family; | chromosome | CDS | 1660473 | 798 | - | 0.546366 |
| phoB | YP0727 | phosphate regulon transcriptional regulatory protein | SubName: Full=Phosphate regulon transcriptional regulatory protein; SubName: Full=Positive response regulator for pho regulon; | chromosome | CDS | 786927 | 720 | + | 0.484722 |
| phoP | YP1764 | response regulator protein | SubName: Full=Response regulator protein; | chromosome | CDS | 1956159 | 672 | - | 0.480655 |
| psaE | YP1291 | putative regulatory protein | RecName: Full=Protein PsaE; Flags: Precursor; | chromosome | CDS | 1412336 | 645 | - | 0.376744 |
| pspA | YP2139 | phage shock protein A | SubName: Full=Phage shock protein A; | chromosome | CDS | 2382719 | 666 | - | 0.48048 |
| pspC | YP2137 | phage shock protein C | SubName: Full=Phage shock protein; SubName: Full=Phage shock protein C; | chromosome | CDS | 2381971 | 360 | - | 0.505556 |
| pspF | YP2140 | psp operon transcriptional activator | SubName: Full=Psp operon transcriptional activator; | chromosome | CDS | 2383614 | 1044 | + | 0.511494 |
| ptxR | YP1164 | putative LysR-family transcriptional regulatory protein | SubName: Full=Putative LysR-family transcriptional regulatory protein; SubName: Full=Putative transcriptional regulator LYSR-type; | chromosome | CDS | 1252764 | 894 | - | 0.495526 |
| purR1 | YP0009 | Transcriptional regulators | SubName: Full=Transcriptional regulators; SubName: Full=Uncharacterized protein; | chromosome | CDS | 9077 | 204 | + | 0.514706 |
| purR10 | YP2929 | LacI-family regulatory protein | SubName: Full=LacI-family regulatory protein; SubName: Full=Putative repressor; | chromosome | CDS | 3264364 | 987 | + | 0.47923 |
| purR11 | YP3396 | putative AraC-family transcriptional regulatory protein | SubName: Full=Putative AraC-family transcriptional regulatory protein; SubName: Full=Putative regulator of xyl operon; | chromosome | CDS | 3807002 | 1194 | - | 0.484087 |
| purR12 | YP3543 | LacI-family regulatory protein | SubName: Full=LacI-family regulatory protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 4032100 | 1083 | - | 0.481071 |
| purR2 | YP0167 | LacI-family transcriptional regulator | SubName: Full=LacI-family transcriptional regulator; SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 183757 | 987 | - | 0.513678 |
| purR3 | YP1471 | Transcriptional regulators | SubName: Full=Transcriptional regulators; | chromosome | CDS | 1632593 | 1050 | + | 0.486667 |
| purR4 | YP1772 | sucrose operon repressor LacI-family | SubName: Full=Putative sucrose specific transcriptional regulator; SubName: Full=Sucrose operon repressor LacI-family; | chromosome | CDS | 1963864 | 1044 | - | 0.491379 |
| purR5 | YP2173 | purine nucleotide synthesis repressor | RecName: Full=HTH-type transcriptional repressor PurR; AltName: Full=Pur regulon repressor; AltName: Full=Purine nucleotide synthesis repressor; | chromosome | CDS | 2417546 | 1026 | + | 0.500975 |
| purR6 | YP2297 | LacI-family transcriptional regulatory protein | SubName: Full=LacI-family transcriptional regulatory protein; SubName: Full=Putative lacI-family transcriptional regulator; | chromosome | CDS | 2549680 | 1041 | + | 0.464938 |
| purR7 | YP2313 | putative LacI-family transcriptional regulatoryprotein | SubName: Full=Putative LacI-family transcriptional regulatory protein; SubName: Full=Putative LacI-family transcriptional regulatoryprotein; SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2573209 | 1005 | + | 0.404975 |
| purR8 | YP2348 | putative LacI-family transcriptional regulatory protein | SubName: Full=Putative LACI-type transcriptional regulator; SubName: Full=Putative LacI-family transcriptional regulatory protein; | chromosome | CDS | 2611995 | 993 | - | 0.470292 |
| purR9 | YP2379 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2647614 | 1137 | - | 0.484609 |
| rcsB | YP0919 | probable two component response regulator component B | SubName: Full=Positive response regulator for colanic capsule biosynthesis; SubName: Full=Probable two component response regulator component B; | chromosome | CDS | 985488 | 654 | + | 0.396024 |
| recG | YP0037 | ATP-dependent DNA helicase | SubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; SubName: Full=DNA helicase; | chromosome | CDS | 47321 | 2082 | - | 0.51585 |
| relA | YP0306 | GTP pyrophosphokinase | SubName: Full=(P)ppGpp synthetase I (GTP pyrophosphokinase); SubName: Full=GTP pyrophosphokinase; EC=2.7.6.5; | chromosome | CDS | 320238 | 2235 | + | 0.509172 |
| rfaH | YP3278 | putative regulatory protein | RecName: Full=Transcription antitermination protein RfaH; | chromosome | CDS | 3654210 | 489 | - | 0.441718 |
| rffC | YP3185 | putative lipopolysaccharide biosynthesis protein | SubName: Full=Putative lipopolysaccharide biosynthesis protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 3555369 | 795 | + | 0.51195 |
| rhaR | YP0488 | L-rhamnose operon transcriptional activator | RecName: Full=HTH-type transcriptional activator RhaR; AltName: Full=L-rhamnose operon transcriptional activator RhaR; | chromosome | CDS | 523010 | 873 | + | 0.490263 |
| rhaS | YP0487 | L-rhamnose operon regulatory protein | RecName: Full=HTH-type transcriptional activator RhaS; AltName: Full=L-rhamnose operon regulatory protein RhaS; | chromosome | CDS | 522056 | 822 | + | 0.476886 |
| rhlB | YP3176 | putative DEAD-box helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 3544289 | 1269 | - | 0.484634 |
| rho | YP3178 | transcription termination factor | RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; | chromosome | CDS | 3546482 | 1260 | + | 0.45873 |
| rimI1 | YP2323 | Acetyltransferases | SubName: Full=Acetyltransferases; SubName: Full=Uncharacterized protein; | chromosome | CDS | 2584496 | 498 | + | 0.522088 |
| rnb | YP2034 | exoribonuclease II | RecName: Full=Exoribonuclease 2; EC=3.1.13.1; AltName: Full=Exoribonuclease II; Short=RNase II; Short=Ribonuclease II; | chromosome | CDS | 2256481 | 1935 | - | 0.502842 |
| rnc | YP2522 | ribonuclease III | RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; | chromosome | CDS | 2794166 | 681 | + | 0.497797 |
| rnk | YP3849 | regulator of nucleoside diphosphate kinase | RecName: Full=Regulator of nucleoside diphosphate kinase; | chromosome | CDS | 4375910 | 411 | + | 0.501217 |
| rnr | YP0536 | ribonuclease R | RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; | chromosome | CDS | 575263 | 2535 | + | 0.523077 |
| rob | YP3727 | putative right origin-binding protein | SubName: Full=Putative right origin-binding protein; SubName: Full=Right origin-binding protein; | chromosome | CDS | 4244330 | 867 | + | 0.469435 |
| rpiR1 | YP0674 | putative rpiR-family transcriptional regulatory protein | SubName: Full=Putative rpiR-family transcriptional regulatory protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 726139 | 846 | + | 0.521277 |
| rpiR2 | YP0887 | putative LacI-family regulatory protein | SubName: Full=Putative LacI-family regulatory protein; SubName: Full=Putative regulator; | chromosome | CDS | 952161 | 741 | - | 0.376518 |
| rpiR3 | YP1138 | Transcriptional regulators | SubName: Full=Transcriptional regulators; SubName: Full=Uncharacterized protein; | chromosome | CDS | 1222498 | 855 | + | 0.559064 |
| rpiR4 | YP1908 | Transcriptional regulators | SubName: Full=Transcriptional regulators; SubName: Full=Uncharacterized protein; | chromosome | CDS | 2127157 | 1026 | - | 0.461014 |
| rpiR5 | YP2641 | putative rpiR-family transcriptional regulatory protein | SubName: Full=Putative rpiR-family transcriptional regulatory protein; SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2930837 | 879 | - | 0.49033 |
| rpoA | YP0232 | DNA-directed RNA polymerase alpha chain | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome | CDS | 232627 | 990 | + | 0.508081 |
| rpoB | YP3110 | DNA-directed RNA polymerase beta chain | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 3461585 | 4029 | - | 0.493671 |
| rpoC | YP3109 | DNA-directed RNA polymerase beta' chain | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 3457236 | 4221 | - | 0.51149 |
| rpoD | YP2958 | RNA polymerase sigma factor RpoD | RecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; | chromosome | CDS | 3291406 | 1896 | - | 0.486814 |
| rpoE | YP2515 | RNA polymerase sigma E factor | RecName: Full=RNA polymerase sigma factor; | chromosome | CDS | 2786967 | 576 | + | 0.451389 |
| rpoH | YP3238 | RNA polymerase sigma-32 factor | RecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; | chromosome | CDS | 3611666 | 858 | + | 0.503497 |
| rpoN | YP3837 | RNA polymerase sigma-54 factor | RecName: Full=RNA polymerase sigma-54 factor; | chromosome | CDS | 4363961 | 1434 | + | 0.488842 |
| rpoS | YP0332 | RNA polymerase sigma factor RpoS | RecName: Full=RNA polymerase sigma factor RpoS; AltName: Full=Sigma S; AltName: Full=Sigma-38; | chromosome | CDS | 345974 | 999 | + | 0.474474 |
| rpoZ | YP0040 | DNA-directed RNA polymerase, omega chain | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome | CDS | 52229 | 276 | - | 0.514493 |
| rsd | YP3100 | regulator of sigma D | RecName: Full=Regulator of sigma D; | chromosome | CDS | 3450388 | 522 | + | 0.450192 |
| rstA | YP2093 | two-component regulatory system, response regulator protein | SubName: Full=Response transcriptional regulatory protein (RstB sensor); SubName: Full=Two-component regulatory system, response regulator protein; | chromosome | CDS | 2331899 | 801 | + | 0.475655 |
| sPS1 | YP2912 | putative kinase protein | SubName: Full=Putative kinase protein; | chromosome | CDS | 3233345 | 1500 | - | 0.491333 |
| sSL2 | YP1323 | putative DEAD box helicase family protein | SubName: Full=Putative ATP-dependent helicase; SubName: Full=Putative DEAD box helicase family protein; | chromosome | CDS | 1451084 | 1758 | + | 0.525597 |
| slyA | YP2160 | MarR-family transcriptional regulatory protein | RecName: Full=Transcriptional regulator SlyA; AltName: Full=Regulator of virulence protein A; AltName: Full=Transcriptional regulator for cryptic hemolysin; | chromosome | CDS | 2403185 | 432 | - | 0.402778 |
| soxR1 | YP0234 | MerR-family transcriptional regulator | SubName: Full=MerR-family transcriptional regulator; SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 234484 | 435 | + | 0.452874 |
| soxR2 | YP2123 | putative regulatory protein | SubName: Full=Putative regulatory protein; SubName: Full=Uncharacterized protein; | chromosome | CDS | 2368576 | 840 | + | 0.372619 |
| spoT | YP0039 | guanosine-3',5'-bisbis(diphosphate)3'-pyrophosph ydrolase | SubName: Full=(P)ppGpp synthetase II; SubName: Full=Guanosine-3,5-bisbis(Diphosphate) 3-pyrophosphydrolase; EC=3.1.7.2; | chromosome | CDS | 50101 | 2109 | - | 0.489331 |
| srmB1 | YP0973 | Superfamily II DNA and RNA helicases | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 1047128 | 1413 | - | 0.515216 |
| srmB2 | YP2512 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; | chromosome | CDS | 2782536 | 1326 | - | 0.505279 |
| tfoX | YP1328 | Regulator of competence-specific genes | SubName: Full=Regulator of competence-specific genes; SubName: Full=Uncharacterized protein; | chromosome | CDS | 1456141 | 723 | + | 0.430152 |
| treR | YP3846 | trehalose operon repressor | SubName: Full=Repressor of treA,B,C; SubName: Full=Trehalose operon repressor; | chromosome | CDS | 4371016 | 954 | + | 0.510482 |
| trpR | YP3730 | putative Trp operon repressor | RecName: Full=Trp operon repressor; | chromosome | CDS | 4246473 | 402 | - | 0.5 |
| ttk | YP0047 | TetR-family regulatory protein | RecName: Full=Nucleoid occlusion factor SlmA; | chromosome | CDS | 58980 | 597 | - | 0.479062 |
| tyrR | YP2131 | transcriptional regulatory protein | SubName: Full=Transcriptional regulatory protein; | chromosome | CDS | 2376319 | 1668 | - | 0.482614 |
| uhpA1 | YP1464 | putative GerR-family transcriptional regulatory protein | SubName: Full=Putative GerR-family transcriptional regulatory protein; SubName: Full=Response regulator; | chromosome | CDS | 1623564 | 630 | - | 0.487302 |
| uhpA2 | YP3371 | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 3779617 | 774 | - | 0.50646 |
| ureG | YP2471 | urease accessory protein | RecName: Full=Urease accessory protein UreG; | chromosome | CDS | 2743422 | 663 | + | 0.484163 |
| uvrY | YP1528 | response regulator protein | SubName: Full=Putative 2-component transcriptional regulator; SubName: Full=Response regulator protein; | chromosome | CDS | 1676847 | 657 | - | 0.455099 |
| uxuR | YP1310 | putative transcriptional regulatory protein | SubName: Full=Putative transcriptional regulatory protein; | chromosome | CDS | 1435045 | 762 | - | 0.498688 |
| wecD1 | YP0033 | conserved membrane protein | SubName: Full=Conserved membrane protein; | chromosome | CDS | 41326 | 801 | + | 0.525593 |
| wecD2 | YP0640 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; SubName: Full=Uncharacterized protein; | chromosome | CDS | 681937 | 504 | - | 0.513889 |
| wecD3 | YP3291 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; EC=2.3.1.-; | chromosome | CDS | 3674363 | 552 | - | 0.438406 |
| wecD4 | YP3985 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; SubName: Full=Uncharacterized protein; | chromosome | CDS | 4536195 | 456 | + | 0.519737 |
| ybtA | YP1655 | transcriptional regulator YbtA | SubName: Full=AraC-like regulator YbtA; SubName: Full=AraC-type transcriptional regulator for yersiniabactin uptake and biosynthetic genes; SubName: Full=Transcriptional regulator YbtA; SubName: Full=YbtA; SubName: Full=YbtA protein; | chromosome | CDS | 1819091 | 960 | - | 0.563542 |
| ypeR | YP2276 | quorum-sensing transcriptional activator YpeR | SubName: Full=Putative transcriptional activator protein; SubName: Full=Quorum-sensing transcriptional activator YpeR; SubName: Full=Transcriptional activator YpeR; | chromosome | CDS | 2524692 | 738 | - | 0.333333 |
| yspR | YP3454 | quorum-sensing transcriptional regulator | SubName: Full=Putative transcriptional activator; SubName: Full=Quorum-sensing transcriptional regulator; | chromosome | CDS | 3926511 | 744 | + | 0.385753 |
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