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2024-06-01 22:46:24

Gene list

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COG category: Transcription
Genomic element: chromosome II

Number of genes found: 46

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Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PSHAb0185 putative transcriptional regulator, TetR familySubName: Full=Putative transcriptional regulator, TetR family; chromosome II CDS225263 585 - 0.374359
NA PSHAb0028 putative Transcriptional regulator (LysR family)SubName: Full=Putative Transcriptional regulator (LysR family); chromosome II CDS34766 789 - 0.406844
NA PSHAb0030 putative AraC-like transcription regulatorSubName: Full=Putative AraC-like transcription regulator; chromosome II CDS36438 861 - 0.398374
NA PSHAb0168 putative sirtuinSubName: Full=Putative sirtuin; chromosome II CDS209311 732 + 0.385246
NA PSHAb0039 putative protein with helicase domainSubName: Full=Putative uncharacterized protein; chromosome II CDS43759 4056 + 0.40927
NA PSHAb0510 putative transcriptional regulator arsR familySubName: Full=Putative transcriptional regulator arsR family; chromosome II CDS574881 546 - 0.39011
NA PSHAb0249 putative transcriptional regulator, LysR familySubName: Full=Putative transcriptional regulator, LysR family; chromosome II CDS293780 843 - 0.377224
NA PSHAb0260 putative transcriptional regulator, AraC familySubName: Full=Putative transcriptional regulator, AraC family; chromosome II CDS306178 999 - 0.405405
NA PSHAb0003 putative DNA helicase with SNF2 domainSubName: Full=Putative DNA helicase with SNF2 domain; chromosome II CDS2802 3147 + 0.368605
NA PSHAb0542 putative transcriptional regulator, asnC familySubName: Full=Putative transcriptional regulator, asnC family; chromosome II CDS606765 432 - 0.418981
NA PSHAb0339 putative bacterial regulatory protein, MarR familySubName: Full=Putative bacterial regulatory protein, MarR family; chromosome II CDS391191 432 + 0.384259
NA PSHAb0181 putative arsenic resistance operon regulatorSubName: Full=Putative arsenic resistance operon regulator; chromosome II CDS220203 345 + 0.414493
NA PSHAb0052 putative AsnC-family/Lrp-family transcriptional regulatorSubName: Full=Putative AsnC-family/Lrp-family transcriptional regulator; chromosome II CDS56749 453 + 0.408389
NA PSHAb0035 putative transcriptional regulator (MarR family)SubName: Full=Putative transcriptional regulator (MarR family); chromosome II CDS40331 492 + 0.396341
NA PSHAb0162 DNA-binding response regulator of two-component systemSubName: Full=DNA-binding response regulator of two-component system; chromosome II CDS201780 672 - 0.418155
NA PSHAb0002 putative transcriptional regulator for chromosome partitioning (parB family protein)SubName: Full=Putative transcriptional regulator for chromosome partitioning (ParB family protein); chromosome II CDS1414 963 + 0.416407
NA PSHAb0538 putative transcription regulatorSubName: Full=Putative transcription regulator; chromosome II CDS602992 507 - 0.390533
NA PSHAb0440 putative Transcriptional regulator, LysR familySubName: Full=Putative Transcriptional regulator, LysR family; chromosome II CDS502584 903 + 0.408638
NA PSHAb0014 putative transcriptional regulatory protein (LysR family)SubName: Full=Putative transcriptional regulatory protein (LysR family); chromosome II CDS18444 912 - 0.411184
NA PSHAb0146 putative transcriptional regulator (LysR family)SubName: Full=Putative transcriptional regulator (LysR family); chromosome II CDS181378 885 - 0.366102
NA PSHAb0369 putative transcriptional regulator with periplasmic binding domain (LysR family, YafC, YeaT)SubName: Full=Putative transcriptional regulator with periplasmic binding domain (LysR family, YafC, YeaT); chromosome II CDS430505 939 - 0.402556
NA PSHAb0218 putative transcriptional regulator (AraC/XylS family)SubName: Full=Putative transcriptional regulator (AraC/XylS family); chromosome II CDS256710 903 - 0.400886
NA PSHAb0015 putative transcriptional regulatory protein (LysR family)SubName: Full=Putative transcriptional regulatory protein (LysR family); chromosome II CDS19630 903 - 0.41639
NA PSHAb0326 putative transcriptional regulator (TetR/AcrR family)SubName: Full=Putative transcriptional regulator (TetR/AcrR family); chromosome II CDS379542 636 + 0.430818
NA PSHAb0290 putative N-acetyltransferaseSubName: Full=Putative N-acetyltransferase; chromosome II CDS340319 483 + 0.397516
NA PSHAb0429 putative transcriptional regulator, AsnC familySubName: Full=Putative transcriptional regulator, AsnC family; chromosome II CDS489078 429 + 0.361305
NA PSHAb0213 putative transcriptional regulator, LysR familySubName: Full=Putative transcriptional regulator, LysR family; chromosome II CDS250837 900 - 0.418889
NA PSHAb0307 putative DNA-binding response regulatorSubName: Full=Putative DNA-binding response regulator; chromosome II CDS359054 528 + 0.429924
NA PSHAb0105 putative transcriptional regulator (LysR family)SubName: Full=Putative transcriptional regulator (LysR family); chromosome II CDS124040 888 + 0.43018
betI PSHAb0420 putative transcriptional repressor for the cellular response to osmotic stress (TetR/AcrR family)RecName: Full=HTH-type transcriptional regulator BetI; chromosome II CDS480825 591 - 0.417936
csgD PSHAb0193 putative csg operon transcription regulator (LuxR family)SubName: Full=Putative csg operon transcription regulator (LuxR family); chromosome II CDS231256 690 + 0.355072
cspX PSHAb0386 Cold shock proteinSubName: Full=Cold shock protein; SubName: Full=RNA chaperone, transcription antiterminator, affects expression of rpoS and uspA; chromosome II CDS448317 210 - 0.4
cspX PSHAb0387 Cold shock proteinSubName: Full=Cold shock protein; chromosome II CDS448717 207 - 0.381643
cspX PSHAb0384 Cold shock proteinSubName: Full=Cold shock protein; chromosome II CDS447918 210 - 0.404762
cspX PSHAb0078 Cold shock proteinSubName: Full=Cold shock protein; chromosome II CDS89904 210 + 0.4
cusR PSHAb0012 transcriptional activator of copper resistance (two-component regulatory system with CusS)SubName: Full=Transcriptional activator of copper resistance (Two-component regulatory system with CusS); chromosome II CDS16187 687 + 0.429403
glpR PSHAb0550 transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate (DeoR family)SubName: Full=Transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate (DeoR family); chromosome II CDS616236 762 - 0.354331
gntR PSHAb0478 putative transcriptional repressor for gluconate/idonate utilization (GalR/LacI familiy)SubName: Full=Putative transcriptional repressor for gluconate/idonate utilization (GalR/LacI familiy); chromosome II CDS539655 951 + 0.392219
nagK PSHAb0149 putative N-acetylglucosamine kinase with Actin-like ATPase domain/transcriptional regulator (NagC/XylR (ROK) family)SubName: Full=Putative N-acetylglucosamine kinase with Actin-like ATPase domain/transcriptional regulator (NagC/XylR (ROK) family); EC=2.7.1.60; chromosome II CDS183945 876 - 0.405251
nanR PSHAb0152 transcriptional repressor of aminosugar metabolism (GntR family)SubName: Full=Transcriptional repressor of aminosugar metabolism (GntR family); chromosome II CDS188134 633 - 0.418641
ohrR PSHAb0179 putative OhrR transcriptional regulator, MarR/EmrR familySubName: Full=Putative OhrR transcriptional regulator, MarR/EmrR family; chromosome II CDS219055 435 - 0.381609
rhlE PSHAb0411 putative ATP-dependent RNA helicase with P-loop hydrolase domain; DEAD-box protein familySubName: Full=Putative ATP-dependent RNA helicase with P-loop hydrolase domain DEAD-box protein family; chromosome II CDS467541 1302 + 0.417051
sigW PSHAb0332 putative RNA polymerase sigma factor (ECF family)SubName: Full=Putative RNA polymerase sigma factor (ECF family); chromosome II CDS385384 525 - 0.411429
sigY PSHAb0450 putative RNA polymerase sigma factor, ECF subfamily, response to stressSubName: Full=Putative RNA polymerase sigma factor, ECF subfamily, response to stress; chromosome II CDS510316 540 + 0.374074
umuD PSHAb0537 component of DNA polymerase VSubName: Full=Component of DNA polymerase V; EC=3.4.21.-; chromosome II CDS602496 414 - 0.463768
yoaA PSHAb0497 putative ATP-dependent helicase YoaA with nucleotide triphosphate hydrolase domain, SOS repair, DinG familySubName: Full=Putative ATP-dependent helicase YoaA with nucleotide triphosphate hydrolase domain, SOS repair, DinG family; EC=3.-.-.-; chromosome II CDS561458 1917 + 0.43036