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2024-06-02 02:42:00

Gene list

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COG category: Transcription
Genomic element: chromosome 1

Number of genes found: 22

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA3432 putative DNA-directed RNA polymerase, beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome 1 CDS50597 4026 - 0.450075
NA PBPRA3431 putative RNA polymerase, beta prime subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome 1 CDS46285 4290 - 0.457576
NA PBPRA3542 putative ATP-dependent RNA helicase, DEAD boxfamilyRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome 1 CDS170838 1314 + 0.456621
FIS PBPRA3411 putative factor-for-inversion stimulation proteinRecName: Full=DNA-binding protein Fis; chromosome 1 CDS28627 297 + 0.43771
PA4279 PBPRA3444 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS60339 582 - 0.376289
PAB7155 PBPRA3597 Hypothetical transcriptional regulatorSubName: Full=Hypothetical transcriptional regulator; chromosome 1 CDS232876 366 - 0.393443
PYRAB062 PBPRA3598 Hypothetical transcriptional regulatorSubName: Full=Hypothetical transcriptional regulator; chromosome 1 CDS233487 378 - 0.402116
RSP1115 PBPRA3510 hypothetical transcriptional regulator, AraC/XylS familySubName: Full=Hypothetical transcriptional regulator, AraC/XylS family; chromosome 1 CDS135654 750 + 0.44
SO0219 PBPRA3437 putative transcription antiterminator proteinRecName: Full=Transcription termination/antitermination protein NusG; chromosome 1 CDS57284 546 - 0.454212
SO4716 PBPRA3505 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS130368 450 - 0.408889
SRLR PBPRA3600 Putative transcriptional regulator, DeoR familySubName: Full=Putative transcriptional regulator, DeoR family; chromosome 1 CDS236023 792 - 0.438131
STY3849 PBPRA3487 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS108136 921 - 0.472313
STY4386 PBPRA3418 putative transcriptional regulator, MerR familySubName: Full=Putative transcriptional regulator, MerR family; chromosome 1 CDS32826 426 - 0.42723
T3631 PBPRA3586 Hypothetical GntR-famly transcriptional regulatorSubName: Full=Hypothetical GntR-famly transcriptional regulator; chromosome 1 CDS218900 672 - 0.41369
T3643 PBPRA3535 putative transcriptional regulator AsnCSubName: Full=Putative transcriptional regulator AsnC; chromosome 1 CDS163905 462 + 0.376623
VP2933 PBPRA3447 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS62995 426 + 0.356808
VV2418 PBPRA3393 putative transcriptional regulator, LysR familySubName: Full=Putative transcriptional regulator, LysR family; chromosome 1 CDS4549 918 + 0.472767
XAC3906 PBPRA3612 Putative ParB family proteinSubName: Full=Putative ParB family protein; chromosome 1 CDS246581 894 - 0.425056
XAC4180 PBPRA3395 putative transcriptional regulator, LuxR familySubName: Full=Putative transcriptional regulator, LuxR family; chromosome 1 CDS7563 807 + 0.417596
Y0361 PBPRA3540 putative transcription termination factorRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome 1 CDS168940 1368 - 0.445906
YIJC PBPRA3467 putative transcriptional regulator, TetR familySubName: Full=Putative transcriptional regulator, TetR family; chromosome 1 CDS87121 633 - 0.442338
YPO3737 PBPRA3430 putative regulator of sigma DSubName: Full=Putative regulator of sigma D; chromosome 1 CDS45539 483 + 0.432712