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2024-06-02 19:13:09

Gene list

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COG category: Transcription
Genomic element: chromosome

Number of genes found: 133

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Mannheimia succiniciproducens MBEL55E, MBEL55E
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA MS0313 unknownSubName: Full=Uncharacterized protein; chromosome CDS292790 462 - 0.387446
NA MS1402 unknownSubName: Full=Uncharacterized protein; chromosome CDS1402972 615 - 0.426016
NA MS2207 unknownSubName: Full=Uncharacterized protein; chromosome CDS2144559 2316 - 0.478411
NA MS1448 unknownSubName: Full=Uncharacterized protein; chromosome CDS1442809 750 - 0.381333
NA MS1431 unknownSubName: Full=Uncharacterized protein; chromosome CDS1426838 147 - 0.503401
NA MS1375 unknownRecName: Full=Transcriptional repressor NrdR; chromosome CDS1383180 450 - 0.413333
NA MS0831 unknownSubName: Full=Uncharacterized protein; chromosome CDS803505 465 - 0.374194
NA MS0113 unknownSubName: Full=Uncharacterized protein; chromosome CDS102388 240 + 0.370833
NA MS0260 unknownRecName: Full=UPF0301 protein MS0260; chromosome CDS237078 630 + 0.425397
NA MS0143 unknownSubName: Full=Uncharacterized protein; chromosome CDS125417 384 + 0.424479
NA MS0409 unknownSubName: Full=Uncharacterized protein; chromosome CDS377148 519 - 0.39499
NA MS0118 unknownSubName: Full=Uncharacterized protein; chromosome CDS103564 327 + 0.464832
NA MS1430 unknownSubName: Full=Uncharacterized protein; chromosome CDS1426568 258 - 0.445736
NA MS0116 unknownSubName: Full=Uncharacterized protein; chromosome CDS103035 270 + 0.474074
NA MS1727 unknownSubName: Full=Uncharacterized protein; chromosome CDS1712737 453 - 0.370861
acrR MS0453 AcrR proteinSubName: Full=AcrR protein; chromosome CDS420044 567 + 0.375661
acrR MS0153 AcrR proteinSubName: Full=AcrR protein; chromosome CDS132427 657 - 0.47032
acrR MS2295 AcrR proteinSubName: Full=AcrR protein; chromosome CDS2224491 618 + 0.355987
acrR MS2211 AcrR proteinSubName: Full=AcrR protein; chromosome CDS2148308 513 + 0.364522
acrR MS1300 AcrR proteinSubName: Full=AcrR protein; chromosome CDS1297846 549 - 0.364299
acrR MS1936 AcrR proteinRecName: Full=Nucleoid occlusion factor SlmA; chromosome CDS1916982 651 - 0.428571
araC MS2322 AraC proteinRecName: Full=HTH-type transcriptional activator RhaS; AltName: Full=L-rhamnose operon regulatory protein RhaS; chromosome CDS2250790 807 + 0.327138
araC MS2173 AraC proteinSubName: Full=AraC protein; chromosome CDS2112414 855 + 0.461988
araC MS1229 AraC proteinSubName: Full=AraC protein; chromosome CDS1228378 1083 + 0.426593
araC MS1400 AraC proteinSubName: Full=AraC protein; chromosome CDS1400645 843 + 0.412811
araC MS2323 AraC proteinRecName: Full=HTH-type transcriptional activator RhaR; AltName: Full=L-rhamnose operon transcriptional activator RhaR; chromosome CDS2251598 831 + 0.368231
araC MS2105 AraC proteinSubName: Full=AraC protein; chromosome CDS2057932 909 + 0.385038
araC MS2131 AraC proteinSubName: Full=AraC protein; chromosome CDS2075782 873 - 0.449026
araC MS0060 AraC proteinSubName: Full=AraC protein; chromosome CDS58644 858 - 0.454545
argR MS1267 ArgR proteinRecName: Full=Arginine repressor; chromosome CDS1266189 468 + 0.410256
bolA MS1708 BolA proteinSubName: Full=BolA protein; chromosome CDS1700168 270 - 0.362963
citB MS2285 CitB proteinSubName: Full=CitB protein; chromosome CDS2213825 678 + 0.423304
citB MS0278 CitB proteinSubName: Full=CitB protein; chromosome CDS254806 681 + 0.399413
cspC MS1144 CspC proteinSubName: Full=CspC protein; chromosome CDS1132812 213 - 0.408451
cspC MS1095 CspC proteinSubName: Full=CspC protein; chromosome CDS1076060 210 - 0.352381
dinG MS1361 DinG proteinSubName: Full=DinG protein; chromosome CDS1365400 1935 - 0.436176
fadR MS0538 FadR proteinSubName: Full=FadR protein; chromosome CDS500580 756 - 0.396825
fadR MS0431 FadR proteinRecName: Full=Fatty acid metabolism regulator protein; chromosome CDS397126 747 + 0.416332
fis MS0531 Fis proteinRecName: Full=DNA-binding protein Fis; chromosome CDS496047 300 - 0.353333
glpR MS0074 GlpR proteinSubName: Full=GlpR protein; chromosome CDS74118 756 + 0.414021
glpR MS2316 GlpR proteinSubName: Full=GlpR protein; chromosome CDS2245276 777 - 0.42471
glpR MS0187 GlpR proteinSubName: Full=GlpR protein; chromosome CDS160502 777 + 0.445302
glpR MS2186 GlpR proteinSubName: Full=GlpR protein; chromosome CDS2123605 759 + 0.43083
glpR MS0024 GlpR proteinSubName: Full=GlpR protein; chromosome CDS24206 768 + 0.420573
glpR MS1983 GlpR proteinSubName: Full=GlpR protein; chromosome CDS1954299 759 + 0.379447
glpR MS0380 GlpR proteinSubName: Full=GlpR protein; chromosome CDS349624 765 - 0.342484
gntR MS0524 GntR proteinSubName: Full=GntR protein; chromosome CDS487939 939 - 0.300319
greA MS2208 GreA proteinRecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; chromosome CDS2146998 477 + 0.454927
greA MS0961 GreA proteinRecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS937529 477 + 0.404612
hepA MS0195 HepA proteinRecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; chromosome CDS166488 2904 + 0.452135
hipB MS0112 HipB proteinSubName: Full=HipB protein; chromosome CDS101872 480 - 0.427083
hypB MS1463 HypB proteinSubName: Full=HypB protein; chromosome CDS1457397 816 - 0.425245
iclR MS0055 IclR proteinSubName: Full=IclR protein; chromosome CDS51479 822 + 0.371046
iclR MS0562 IclR proteinSubName: Full=IclR protein; chromosome CDS524718 795 - 0.38239
lexA MS0744 LexA proteinRecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS695450 678 - 0.454277
lrp MS0035 Lrp proteinSubName: Full=Lrp protein; chromosome CDS33356 453 - 0.375276
lrp MS1455 Lrp proteinSubName: Full=Lrp protein; chromosome CDS1450734 492 - 0.396341
lysR MS0895 LysR proteinSubName: Full=LysR protein; chromosome CDS872498 894 - 0.368009
lysR MS1395 LysR proteinSubName: Full=LysR protein; chromosome CDS1395855 897 - 0.479376
lysR MS0336 LysR proteinSubName: Full=LysR protein; chromosome CDS314564 933 - 0.351554
lysR MS1097 LysR proteinSubName: Full=LysR protein; chromosome CDS1079413 894 + 0.42953
lysR MS0154 LysR proteinSubName: Full=LysR protein; chromosome CDS133076 909 - 0.454345
lysR MS2151 LysR proteinSubName: Full=LysR protein; chromosome CDS2089480 909 - 0.50385
lysR MS0884 LysR proteinSubName: Full=LysR protein; chromosome CDS860411 906 + 0.466887
lysR MS2006 LysR proteinSubName: Full=LysR protein; chromosome CDS1976339 834 - 0.498801
lysR MS2152 LysR proteinSubName: Full=LysR protein; chromosome CDS2090417 867 - 0.395617
lysR MS0044 LysR proteinSubName: Full=LysR protein; chromosome CDS40049 909 - 0.459846
lysR MS2176 LysR proteinSubName: Full=LysR protein; chromosome CDS2115063 987 + 0.440729
lysR MS2008 LysR proteinSubName: Full=LysR protein; chromosome CDS1977988 933 - 0.495177
lysR MS1210 LysR proteinSubName: Full=LysR protein; chromosome CDS1209406 915 + 0.408743
lysR MS0763 LysR proteinSubName: Full=LysR protein; chromosome CDS736225 927 + 0.466019
lysR MS1689 LysR proteinSubName: Full=LysR protein; chromosome CDS1682796 900 + 0.458889
lysR MS1415 LysR proteinSubName: Full=LysR protein; chromosome CDS1415563 909 - 0.491749
lysR MS2092 LysR proteinSubName: Full=LysR protein; chromosome CDS2049745 894 - 0.50783
lysR MS2134 LysR proteinSubName: Full=LysR protein; chromosome CDS2078263 888 - 0.463964
lysR MS2116 LysR proteinSubName: Full=LysR protein; chromosome CDS2063431 918 + 0.45207
lysR MS2130 LysR proteinSubName: Full=LysR protein; chromosome CDS2074805 900 + 0.443333
lysR MS2143 LysR proteinSubName: Full=LysR protein; chromosome CDS2084064 966 - 0.459627
lysR MS1039 LysR proteinSubName: Full=LysR protein; chromosome CDS1026013 972 + 0.41358
lysR MS1403 LysR proteinSubName: Full=LysR protein; chromosome CDS1403681 894 - 0.449664
malT MS2072 MalT proteinSubName: Full=MalT protein; chromosome CDS2029474 2727 - 0.434543
marR MS2091 MarR proteinSubName: Full=MarR protein; chromosome CDS2049188 438 - 0.481735
marR MS2146 MarR proteinSubName: Full=MarR protein; chromosome CDS2086730 438 + 0.481735
metJ MS1966 MetJ proteinSubName: Full=MetJ protein; chromosome CDS1938374 375 + 0.386667
mfd MS0216 Mfd proteinRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS192190 3447 + 0.452277
nagC MS1527 NagC proteinRecName: Full=N-acetyl-D-glucosamine kinase; EC=2.7.1.59; AltName: Full=GlcNAc kinase; chromosome CDS1518032 963 - 0.428868
nagC MS1413 NagC proteinSubName: Full=NagC protein; chromosome CDS1413122 1119 + 0.391421
nusA MS1445 NusA proteinSubName: Full=NusA protein; chromosome CDS1440351 1506 - 0.431607
nusB MS0975 NusB proteinRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS950153 432 - 0.400463
nusG MS0205 NusG proteinRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS179190 555 + 0.452252
ompR MS1246 OmpR proteinSubName: Full=OmpR protein; chromosome CDS1245463 681 - 0.425844
ompR MS1504 OmpR proteinSubName: Full=OmpR protein; chromosome CDS1495817 711 + 0.438819
ompR MS1913 OmpR proteinSubName: Full=OmpR protein; chromosome CDS1892191 708 + 0.412429
purR MS0644 PurR proteinSubName: Full=PurR protein; chromosome CDS598946 1005 - 0.442786
purR MS0148 PurR proteinSubName: Full=PurR protein; chromosome CDS128120 1023 - 0.455523
purR MS1238 PurR proteinSubName: Full=PurR protein; chromosome CDS1237553 939 - 0.455804
purR MS0808 PurR proteinSubName: Full=PurR protein; chromosome CDS782392 999 + 0.455455
purR MS1242 PurR proteinSubName: Full=PurR protein; chromosome CDS1242156 999 + 0.441441
purR MS1531 PurR proteinSubName: Full=PurR protein; chromosome CDS1522574 984 - 0.410569
purR MS0284 PurR proteinSubName: Full=PurR protein; chromosome CDS260673 1005 + 0.438806
purR MS1063 PurR proteinRecName: Full=HTH-type transcriptional repressor PurR; AltName: Full=Pur regulon repressor; AltName: Full=Purine nucleotide synthesis repressor; chromosome CDS1046406 1005 - 0.436816
purR MS2375 PurR proteinSubName: Full=PurR protein; chromosome CDS2304683 1167 + 0.438732
purR MS1317 PurR proteinSubName: Full=PurR protein; chromosome CDS1319925 993 - 0.427996
recG MS1735 RecG proteinSubName: Full=RecG protein; chromosome CDS1723979 2082 - 0.450528
rho MS1837 Rho proteinRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS1833030 1359 + 0.456954
rnc MS0368 Rnc proteinRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS339379 675 - 0.445926
rpiR MS0198 RpiR proteinSubName: Full=RpiR protein; chromosome CDS172064 861 - 0.414634
rpoA MS2023 RpoA proteinRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS1993211 990 - 0.424242
rpoB MS0212 RpoB proteinRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS182813 4029 + 0.439811
rpoC MS0213 RpoC proteinRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS186924 4317 + 0.453324
rpoD MS0025 RpoD proteinRecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; chromosome CDS25085 849 - 0.432273
rpoD MS1760 RpoD proteinRecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome CDS1752985 1887 - 0.417064
rpoE MS2228 RpoE proteinRecName: Full=RNA polymerase sigma factor; chromosome CDS2162234 597 + 0.41541
rpoZ MS1737 RpoZ proteinRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS1728249 267 - 0.393258
sPS1 MS1964 SPS1 proteinRecName: Full=3-deoxy-D-manno-octulosonic acid kinase; Short=Kdo kinase; EC=2.7.1.166; AltName: Full=SPS1 protein; chromosome CDS1936741 735 + 0.401361
soxR MS0468 SoxR proteinSubName: Full=SoxR protein; chromosome CDS435209 411 + 0.40146
soxR MS0886 SoxR proteinSubName: Full=SoxR protein; chromosome CDS862220 420 - 0.421429
soxR MS1385 SoxR proteinSubName: Full=SoxR protein; chromosome CDS1388425 477 - 0.412998
soxR MS1433 SoxR proteinSubName: Full=SoxR protein; chromosome CDS1427217 393 - 0.43257
soxR MS0179 SoxR proteinSubName: Full=SoxR protein; chromosome CDS154958 390 - 0.323077
spoT MS0241 SpoT proteinSubName: Full=SpoT protein; chromosome CDS218053 2226 + 0.429919
spoT MS1736 SpoT proteinSubName: Full=SpoT protein; chromosome CDS1726066 2124 - 0.427495
srmB MS0495 SrmB proteinRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS459877 1842 + 0.463084
srmB MS1950 SrmB proteinRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS1924874 1389 + 0.465083
srmB MS1836 SrmB proteinRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS1831572 1254 - 0.460925
srmR MS0694 SrmR proteinSubName: Full=SrmR protein; chromosome CDS646553 1152 + 0.384549
tfoX MS2301 TfoX proteinSubName: Full=TfoX protein; chromosome CDS2228800 654 - 0.281346
trpR MS1566 TrpR proteinRecName: Full=Trp operon repressor homolog; chromosome CDS1561064 306 + 0.392157
tyrR MS0762 TyrR proteinSubName: Full=TyrR protein; chromosome CDS734977 1044 + 0.443487
vacB MS0473 VacB proteinRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; chromosome CDS437326 2394 + 0.459482
vacB MS1468 VacB proteinRecName: Full=Exoribonuclease 2; EC=3.1.13.1; AltName: Full=Exoribonuclease II; Short=RNase II; Short=Ribonuclease II; chromosome CDS1460226 1980 + 0.457071
wecD MS2102 WecD proteinSubName: Full=WecD protein; chromosome CDS2056124 441 - 0.403628
wecD MS0323 WecD proteinSubName: Full=WecD protein; chromosome CDS299944 435 - 0.413793