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2024-06-09 21:43:06

Gene list

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COG category: Transcription
Genomic element: chromosome 1

Number of genes found: 20

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA0409 putative RNA polymerase-associated protein HepARecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; chromosome 1 CDS64201 2919 - 0.445358
NA PBPRA0460 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS133782 1104 + 0.432971
ARGR PBPRA0471 hypothetical arginine repressorRecName: Full=Arginine repressor; chromosome 1 CDS147052 495 - 0.430303
ATU2278 PBPRA0586 putative Transcription activator HlyUSubName: Full=Putative Transcription activator HlyU; chromosome 1 CDS291889 294 + 0.418367
CPSR PBPRA0572 putative sigma-54 dependent transcriptional regulatorSubName: Full=Putative sigma-54 dependent transcriptional regulator; chromosome 1 CDS276444 1458 + 0.424554
EBIG1361 PBPRA0390 putative arginine repressorRecName: Full=Arginine repressor; chromosome 1 CDS44602 471 - 0.422505
ECS0018 PBPRA0585 putative transcriptional activator protein NhaRSubName: Full=Putative transcriptional activator protein NhaR; chromosome 1 CDS290905 888 + 0.407658
ECS0080 PBPRA0423 putative transcriptional regulator, LysR familySubName: Full=Putative transcriptional regulator, LysR family; chromosome 1 CDS85875 957 + 0.405434
ECS3950 PBPRA0430 putative DNA-directed RNA polymerase, sigmasubunitRecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome 1 CDS95883 1839 - 0.437738
GALR PBPRA0500 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS180037 240 + 0.3875
HD1699 PBPRA0601 putative transcription elongation factor GreARecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome 1 CDS310669 501 + 0.401198
PSPTO300 PBPRA0466 putative xylose operon regulatory proteinSubName: Full=Putative xylose operon regulatory protein; chromosome 1 CDS142145 717 - 0.454672
RB1454 PBPRA0465 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS141705 345 - 0.408696
SO0916 PBPRA0481 hypothetical transcriptional regulator, MarR familySubName: Full=Hypothetical transcriptional regulator, MarR family; chromosome 1 CDS160713 942 - 0.443737
SO3988 PBPRA0547 putative aerobic respiration control protein FexASubName: Full=Putative aerobic respiration control protein FexA; chromosome 1 CDS244587 720 - 0.434722
STY2836 PBPRA0562 putative ATP-dependent RNA helicase SrmBRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome 1 CDS262822 1260 - 0.443651
STY3156 PBPRA0499 putative transcription regulator LacI familySubName: Full=Putative transcription regulator LacI family; chromosome 1 CDS179279 735 + 0.439456
T3205 PBPRA0611 putative transcription pausing L factorSubName: Full=Putative transcription pausing L factor; chromosome 1 CDS318221 1488 + 0.442876
VC2489 PBPRA0420 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome 1 CDS80215 645 + 0.435659
YGAE PBPRA0427 putative LuxZSubName: Full=Putative LuxZ; chromosome 1 CDS92544 654 - 0.438838