Gene list
Applied filters:
COG category: Transcription
Genomic element: chromosome
Number of genes found: 214
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| Saccharophagus degradans 2-40, 2-40 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Sde_1789 | putative transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome | CDS | 2280758 | 633 | + | 0.462875 |
| NA | Sde_1092 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 1397334 | 717 | - | 0.48954 |
| NA | Sde_2040 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2567706 | 303 | - | 0.524752 |
| NA | Sde_2804 | regulatory protein, LysR | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 3539029 | 942 | + | 0.483015 |
| NA | Sde_3722 | putative transcriptional regulator, TetR family | SubName: Full=Regulatory protein, TetR; | chromosome | CDS | 4710244 | 570 | - | 0.392982 |
| NA | Sde_0506 | transcriptional regulator | SubName: Full=Transcriptional regulator, LacI family; | chromosome | CDS | 619329 | 999 | - | 0.488488 |
| NA | Sde_2274 | AraC-type DNA-binding domain-containing proteins-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 2891363 | 1179 | - | 0.421544 |
| NA | Sde_3745 | putative transcriptional regulator | SubName: Full=LysR, substrate-binding; | chromosome | CDS | 4744633 | 915 | + | 0.534426 |
| NA | Sde_1270 | Gamma-glutamyltranspeptidase | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 1627630 | 708 | + | 0.463277 |
| NA | Sde_1442 | sigma-24 (FecI-like) | SubName: Full=Sigma-70, region 4 type 2; | chromosome | CDS | 1863304 | 507 | + | 0.404339 |
| NA | Sde_3817 | DNA-binding protein | SubName: Full=Transcriptional regulator, XRE family; | chromosome | CDS | 4819612 | 219 | - | 0.465753 |
| NA | Sde_0293 | putative transcriptional regulator, TetR family | SubName: Full=Regulatory protein, TetR; | chromosome | CDS | 363965 | 612 | + | 0.52451 |
| NA | Sde_1391 | AraC-type DNA-binding domain-containing proteins-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 1796779 | 1140 | + | 0.407895 |
| NA | Sde_1787 | Repressor lexA | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 2279267 | 606 | - | 0.452145 |
| NA | Sde_0093 | hypothetical protein | SubName: Full=Helix-turn-helix type 3; | chromosome | CDS | 114131 | 369 | - | 0.509485 |
| NA | Sde_1016 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 1299140 | 693 | - | 0.515152 |
| NA | Sde_2388 | sigma-24 (FecI-like) | SubName: Full=Sigma-70, region 4 type 2; | chromosome | CDS | 3027753 | 558 | + | 0.449821 |
| NA | Sde_0224 | urease accessory protein UreG | RecName: Full=Urease accessory protein UreG; | chromosome | CDS | 284061 | 624 | + | 0.429487 |
| NA | Sde_3733 | response regulator receiver domain protein (CheY-like) | SubName: Full=LytTr DNA-binding region; | chromosome | CDS | 4734056 | 750 | + | 0.428 |
| NA | Sde_1680 | RNA polymerase associated protein-like | RecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; | chromosome | CDS | 2147280 | 2625 | + | 0.462857 |
| NA | Sde_3459 | protein of unknown function DUF193 | chromosome | CDS | 4399960 | 555 | - | 0.506306 | |
| NA | Sde_2299 | putative transcriptional regulator, AsnC family | SubName: Full=Transcriptional regulator, AsnC family; | chromosome | CDS | 2924825 | 471 | + | 0.475584 |
| NA | Sde_1721 | putative transcriptional regulator | SubName: Full=Condensin subunit ScpB; | chromosome | CDS | 2194316 | 1059 | + | 0.480642 |
| NA | Sde_1948 | response regulator receiver domain protein (CheY-like) | SubName: Full=Heavy metal response regulator; | chromosome | CDS | 2450044 | 681 | + | 0.521292 |
| NA | Sde_4009 | ParB-like partition protein | SubName: Full=Chromosome segregation DNA-binding protein; | chromosome | CDS | 5048083 | 915 | - | 0.492896 |
| NA | Sde_3805 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 4805169 | 1320 | - | 0.432576 |
| NA | Sde_1840 | Gentamicin 3'-N-acetyltransferase | SubName: Full=Gentamicin 3-N-acetyltransferase; EC=2.3.1.60; | chromosome | CDS | 2333620 | 477 | + | 0.442348 |
| NA | Sde_3828 | putative cold-shock DNA-binding domain protein | SubName: Full=Cold-shock DNA-binding protein family; | chromosome | CDS | 4827387 | 261 | + | 0.421456 |
| NA | Sde_2888 | AraC-type DNA-binding domain-containing proteins-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 3661542 | 861 | - | 0.423926 |
| NA | Sde_1685 | putative cold-shock DNA-binding domain protein | SubName: Full=Cold-shock DNA-binding protein family; | chromosome | CDS | 2154121 | 270 | - | 0.462963 |
| NA | Sde_3558 | putative cold-shock DNA-binding domain protein | SubName: Full=Cold-shock DNA-binding protein family; | chromosome | CDS | 4519064 | 210 | - | 0.42381 |
| NA | Sde_0379 | putative transcriptional regulator, XRE family | SubName: Full=Transcriptional regulator; | chromosome | CDS | 467619 | 555 | - | 0.43964 |
| NA | Sde_2051 | 3-isopropylmalate dehydrogenase | SubName: Full=Transcriptional regulator, BadM/Rrf2 family; | chromosome | CDS | 2630516 | 417 | + | 0.458034 |
| NA | Sde_3290 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 4201633 | 1350 | + | 0.482222 |
| NA | Sde_3011 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3840756 | 327 | - | 0.373089 |
| NA | Sde_2875 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 3642567 | 870 | - | 0.497701 |
| NA | Sde_1961 | putative transcriptional regulator, MerR family | SubName: Full=Cd(II)/Pb(II)-responsive transcriptional regulator; | chromosome | CDS | 2465852 | 405 | + | 0.488889 |
| NA | Sde_3613 | AraC-type DNA-binding domain-containing proteins-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 4583854 | 1158 | - | 0.417962 |
| NA | Sde_3454 | NusB protein | RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; | chromosome | CDS | 4395974 | 453 | - | 0.459161 |
| NA | Sde_3838 | response regulator receiver domain protein (CheY-like) | SubName: Full=Phosphate regulon transcriptional regulatory protein phoB; | chromosome | CDS | 4838000 | 705 | + | 0.49078 |
| NA | Sde_0713 | Ribulose-phosphate 3-epimerase | SubName: Full=Uncharacterized protein; | chromosome | CDS | 922165 | 246 | + | 0.434959 |
| NA | Sde_0480 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 592109 | 798 | + | 0.473684 |
| NA | Sde_3656 | transcription termination factor Rho | RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; | chromosome | CDS | 4636973 | 1260 | + | 0.48254 |
| NA | Sde_0068 | putative transcriptional regulator, TetR family | SubName: Full=Regulatory protein, TetR; | chromosome | CDS | 84125 | 582 | + | 0.419244 |
| NA | Sde_3440 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 4379873 | 741 | - | 0.454791 |
| NA | Sde_0095 | sigma-24 (FecI-like) | SubName: Full=Sigma-70 region 4; | chromosome | CDS | 115035 | 561 | - | 0.516934 |
| NA | Sde_2319 | conserved hypothetical protein | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 2946128 | 444 | - | 0.407658 |
| NA | Sde_0554 | TonB-dependent receptor | SubName: Full=Helix-turn-helix, type 11; | chromosome | CDS | 674897 | 705 | + | 0.489362 |
| NA | Sde_1054 | Exoribonuclease II | RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; | chromosome | CDS | 1353057 | 2814 | + | 0.496446 |
| NA | Sde_3760 | putative cold-shock DNA-binding domain protein | SubName: Full=Cold-shock DNA-binding protein family; | chromosome | CDS | 4759221 | 210 | - | 0.419048 |
| NA | Sde_1189 | L-2,4-diaminobutyric acid acetyltransferase | SubName: Full=L-2,4-diaminobutyric acid acetyltransferase; | chromosome | CDS | 1534736 | 522 | + | 0.5 |
| NA | Sde_1796 | transcription-repair coupling protein Mfd | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 2286400 | 3462 | - | 0.453495 |
| NA | Sde_3949 | Chitinase II | SubName: Full=Regulatory protein, DeoR; | chromosome | CDS | 4978444 | 768 | - | 0.539062 |
| NA | Sde_3891 | hypothetical protein | SubName: Full=Regulatory protein, MarR; | chromosome | CDS | 4911329 | 453 | + | 0.456954 |
| NA | Sde_3781 | regulatory protein, ArsR | SubName: Full=Transcriptional regulator, ArsR family; | chromosome | CDS | 4781783 | 333 | - | 0.513514 |
| NA | Sde_2495 | AraC-type DNA-binding domain-containing proteins-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 3153784 | 1140 | - | 0.409649 |
| NA | Sde_0802 | AraC-type DNA-binding domain-containing proteins-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 1046281 | 1146 | - | 0.400524 |
| NA | Sde_0297 | sigma-24 (FecI-like) | SubName: Full=Sigma-70 region 2; | chromosome | CDS | 368829 | 567 | + | 0.520282 |
| NA | Sde_3031 | AraC-type DNA-binding domain-containing proteins-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 3871493 | 1020 | + | 0.498039 |
| NA | Sde_0984 | glucose/galactose transporter | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome | CDS | 1257131 | 990 | + | 0.455556 |
| NA | Sde_3230 | regulatory protein, LysR | SubName: Full=LysR, substrate-binding; | chromosome | CDS | 4103364 | 897 | + | 0.483835 |
| NA | Sde_3200 | Dystroglycan-type cadherin-like | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 4076735 | 1551 | - | 0.510638 |
| NA | Sde_0578 | acetyltransferase-like | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 714700 | 504 | + | 0.448413 |
| NA | Sde_3353 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 4280331 | 678 | + | 0.486726 |
| NA | Sde_3955 | putative transcriptional regulator | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 4984084 | 936 | + | 0.489316 |
| NA | Sde_3500 | Band 7 protein | SubName: Full=Transcriptional regulator, LuxR family; | chromosome | CDS | 4455673 | 744 | - | 0.420699 |
| NA | Sde_0361 | putative transcriptional regulator, TetR family | SubName: Full=Regulatory protein, TetR; | chromosome | CDS | 447383 | 639 | - | 0.486698 |
| NA | Sde_3997 | Glycyl-tRNA synthetase, alpha subunit | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 5030029 | 798 | + | 0.487469 |
| NA | Sde_0823 | sigma-24 (FecI-like) | SubName: Full=Sigma-70 region 2; | chromosome | CDS | 1072004 | 600 | + | 0.495 |
| NA | Sde_2745 | putative transcriptional regulator | SubName: Full=Phage transcriptional regulator, AlpA; | chromosome | CDS | 3474191 | 279 | + | 0.480287 |
| NA | Sde_0919 | TonB-dependent receptor | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome | CDS | 1184379 | 534 | + | 0.464419 |
| NA | Sde_2087 | putative transcriptional regulator | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 2671104 | 900 | + | 0.471111 |
| NA | Sde_3601 | response regulator receiver domain protein (CheY-like) | SubName: Full=Helix-turn-helix, AraC type; | chromosome | CDS | 4561943 | 837 | - | 0.517324 |
| NA | Sde_3265 | regulatory protein, LysR | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 4165711 | 891 | + | 0.418631 |
| NA | Sde_2054 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 2634389 | 597 | - | 0.480737 |
| NA | Sde_0550 | two component transcriptional regulator, winged helix family | SubName: Full=Two component transcriptional regulator, winged helix family; | chromosome | CDS | 671253 | 690 | + | 0.471014 |
| NA | Sde_1235 | GreA/GreB family elongation factor | RecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; | chromosome | CDS | 1584289 | 474 | + | 0.451477 |
| NA | Sde_2183 | Transcriptional regulators-like | SubName: Full=Periplasmic binding protein/LacI transcriptional regulator; | chromosome | CDS | 2778097 | 1692 | + | 0.422577 |
| NA | Sde_3711 | putative ATP-dependent RNA helicase | SubName: Full=DEAD/DEAH box helicase-like protein; | chromosome | CDS | 4698398 | 1311 | - | 0.460717 |
| NA | Sde_3619 | histidine kinase | SubName: Full=Histidine kinase; EC=2.7.3.-; | chromosome | CDS | 4592829 | 879 | - | 0.506257 |
| NA | Sde_3977 | transcriptional regulatory protein | SubName: Full=LysR, substrate-binding; | chromosome | CDS | 5008591 | 948 | - | 0.510549 |
| NA | Sde_2642 | transcriptional activator MltR | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 3342029 | 330 | + | 0.478788 |
| NA | Sde_0916 | transcriptional activator, putative, Baf family | RecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; | chromosome | CDS | 1181559 | 783 | + | 0.532567 |
| NA | Sde_0290 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 360958 | 711 | + | 0.43038 |
| NA | Sde_3953 | AraC-family transcriptional regulator | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 4982375 | 864 | + | 0.46875 |
| NA | Sde_3034 | ATP-dependent RNA helicase DeaD | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 3875326 | 1788 | + | 0.501119 |
| NA | Sde_0686 | Ribosomal protein S21 | SubName: Full=Transcriptional regulator, LacI family; | chromosome | CDS | 874343 | 1005 | + | 0.479602 |
| NA | Sde_2709 | N utilization substance protein A | SubName: Full=Transcription termination factor NusA; | chromosome | CDS | 3437188 | 1482 | - | 0.477058 |
| NA | Sde_2407 | sigma-24 (FecI-like) | SubName: Full=Sigma-70 region 2; | chromosome | CDS | 3050122 | 540 | - | 0.511111 |
| NA | Sde_0781 | putative transcriptional regulator, XRE family | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1011166 | 495 | - | 0.438384 |
| NA | Sde_2409 | putative transcriptional regulator | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 3051519 | 858 | - | 0.469697 |
| NA | Sde_3957 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 4986250 | 915 | + | 0.48306 |
| NA | Sde_1604 | putative transcriptional regulator, XRE family | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2061024 | 528 | + | 0.528409 |
| NA | Sde_3941 | putative transcriptional regulator, MerR family | SubName: Full=Regulatory protein, MerR; | chromosome | CDS | 4966856 | 387 | - | 0.449612 |
| NA | Sde_2487 | transcriptional regulator KdgR | SubName: Full=Regulatory protein, IclR; | chromosome | CDS | 3139393 | 777 | - | 0.499357 |
| NA | Sde_1794 | putative cold-shock DNA-binding domain protein | SubName: Full=Cold-shock DNA-binding protein family; | chromosome | CDS | 2285042 | 228 | + | 0.425439 |
| NA | Sde_2292 | transcriptional regulator, ArsR family | SubName: Full=Transcriptional regulator, ArsR family; | chromosome | CDS | 2918100 | 300 | + | 0.403333 |
| NA | Sde_1229 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1576904 | 564 | - | 0.448582 |
| NA | Sde_0647 | putative ATP-dependent RNA helicase DbpA | SubName: Full=DEAD/DEAH box helicase-like protein; | chromosome | CDS | 816509 | 1395 | + | 0.475986 |
| NA | Sde_2491 | Quinolinate synthetase A | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 3147486 | 1158 | + | 0.420553 |
| NA | Sde_1838 | Cytochrome c-type biogenesis protein CcmF | SubName: Full=Transcriptional regulator, ArsR family; | chromosome | CDS | 2332599 | 315 | - | 0.444444 |
| NA | Sde_3322 | putative sigma-70 factor, ECF subfamily | SubName: Full=Sigma-70 region 2; | chromosome | CDS | 4240777 | 1263 | - | 0.498021 |
| NA | Sde_2727 | GreA/GreB family elongation factor | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 3453893 | 483 | - | 0.445135 |
| NA | Sde_3059 | transcriptional regulator, GntR family/aminotransferase, class I | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 3911426 | 1422 | + | 0.522503 |
| NA | Sde_1120 | Exoribonuclease II | SubName: Full=RNAse R; EC=3.1.-.-; | chromosome | CDS | 1450940 | 1941 | - | 0.486862 |
| NA | Sde_2600 | response regulator receiver domain protein (CheY-like) | SubName: Full=Transcriptional regulatory protein-like protein; | chromosome | CDS | 3297829 | 678 | + | 0.49705 |
| NA | Sde_0180 | AraC-type DNA-binding domain-containing proteins-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 223457 | 1137 | - | 0.368514 |
| NA | Sde_2781 | putative transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome | CDS | 3514112 | 621 | - | 0.47343 |
| NA | Sde_3110 | response regulator receiver domain protein (CheY-like) | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3972312 | 1194 | - | 0.436348 |
| NA | Sde_3594 | CheW protein | RecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; | chromosome | CDS | 4553419 | 855 | - | 0.472515 |
| NA | Sde_1934 | putative transcriptional regulator, MerR family | SubName: Full=Regulatory protein, MerR; | chromosome | CDS | 2438926 | 429 | + | 0.494172 |
| NA | Sde_1602 | HI0933-like protein | SubName: Full=Transcriptional regulator, AraC family with amidase-like domain; | chromosome | CDS | 2057819 | 993 | - | 0.452165 |
| NA | Sde_0807 | methyltransferase | SubName: Full=Helix-turn-helix, Fis-type; | chromosome | CDS | 1053551 | 318 | - | 0.487421 |
| NA | Sde_0179 | AraC-type DNA-binding domain-containing proteins-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 222279 | 1167 | - | 0.422451 |
| NA | Sde_3703 | response regulator receiver domain protein (CheY-like) | SubName: Full=Two component transcriptional regulator, winged helix family; | chromosome | CDS | 4688076 | 699 | + | 0.446352 |
| NA | Sde_1253 | sigma factor RpoS | RecName: Full=RNA polymerase sigma factor RpoS; AltName: Full=Sigma S; AltName: Full=Sigma-38; | chromosome | CDS | 1603286 | 1002 | + | 0.471058 |
| NA | Sde_1584 | putative transcriptional regulator, MerR family | SubName: Full=Transcriptional regulator, MerR family; | chromosome | CDS | 2034505 | 357 | + | 0.487395 |
| NA | Sde_1768 | NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 2256588 | 684 | - | 0.44883 |
| NA | Sde_1909 | putative cold-shock DNA-binding domain protein | SubName: Full=Cold-shock DNA-binding protein family; | chromosome | CDS | 2411286 | 210 | - | 0.419048 |
| NA | Sde_3000 | response regulator receiver domain protein (CheY-like) | SubName: Full=LytTr DNA-binding region; | chromosome | CDS | 3824724 | 690 | - | 0.44058 |
| NA | Sde_1884 | Rhodanese-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 2378054 | 1035 | + | 0.458937 |
| NA | Sde_1924 | putative transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome | CDS | 2425862 | 633 | - | 0.442338 |
| NA | Sde_4002 | transcriptional regulator, AraC family | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 5038294 | 1086 | + | 0.43186 |
| NA | Sde_1396 | transcriptional regulator | SubName: Full=Transcriptional regulator, LacI family; | chromosome | CDS | 1808683 | 999 | + | 0.469469 |
| NA | Sde_3895 | sigma-24 (FecI-like) | SubName: Full=Sigma-70 region 2; | chromosome | CDS | 4916037 | 492 | + | 0.493902 |
| NA | Sde_3960 | transcriptional regulator, LacI family | SubName: Full=Transcriptional regulator, LacI family; | chromosome | CDS | 4990506 | 1023 | + | 0.468231 |
| NA | Sde_3808 | AraC-type DNA-binding domain-containing proteins-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 4809169 | 1134 | + | 0.440035 |
| NA | Sde_0541 | conserved hypothetical protein | SubName: Full=Helix-turn-helix, HxlR type; | chromosome | CDS | 662150 | 498 | - | 0.433735 |
| NA | Sde_2639 | Protein of unknown function UPF0031 | SubName: Full=Fructokinase; EC=2.7.1.4; | chromosome | CDS | 3338281 | 891 | - | 0.497194 |
| NA | Sde_2251 | sigma-24 (FecI-like) | SubName: Full=Sigma-70 region 2; | chromosome | CDS | 2858569 | 582 | - | 0.45189 |
| NA | Sde_1509 | DNA topoisomerase III | SubName: Full=DEAD/DEAH box helicase-like protein; | chromosome | CDS | 1948021 | 1197 | + | 0.455305 |
| NA | Sde_2643 | Exonuclease | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 3342625 | 621 | + | 0.42351 |
| NA | Sde_1950 | putative transcriptional regulator, MerR family | SubName: Full=Transcriptional regulator, MerR family; | chromosome | CDS | 2452242 | 450 | + | 0.482222 |
| NA | Sde_2164 | Flagellar protein FliS | RecName: Full=RNA polymerase sigma factor FliA; AltName: Full=RNA polymerase sigma factor for flagellar operon; AltName: Full=Sigma F; AltName: Full=Sigma-28; | chromosome | CDS | 2756990 | 753 | - | 0.498008 |
| NA | Sde_3697 | GTP diphosphokinase | SubName: Full=RelA/SpoT family protein; EC=2.7.6.5; | chromosome | CDS | 4681509 | 2109 | + | 0.492651 |
| NA | Sde_1188 | transcriptional regulator, MarR family | SubName: Full=Transcriptional regulator, MarR family; | chromosome | CDS | 1533827 | 504 | - | 0.472222 |
| NA | Sde_0062 | response regulator receiver domain protein (CheY-like) | SubName: Full=Regulatory protein, LuxR; | chromosome | CDS | 75944 | 1110 | - | 0.435135 |
| NA | Sde_1661 | Outer membrane lipoprotein carrier protein LolA | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 2129078 | 1002 | + | 0.46507 |
| NA | Sde_2999 | response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) | SubName: Full=Helix-turn-helix, AraC type; | chromosome | CDS | 3823238 | 1215 | + | 0.403292 |
| NA | Sde_1314 | putative transcriptional regulator, TetR family | SubName: Full=Regulatory protein, TetR; | chromosome | CDS | 1704772 | 675 | - | 0.45037 |
| NA | Sde_0924 | DNA-directed RNA polymerase | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 1187680 | 4086 | + | 0.459129 |
| NA | Sde_3025 | Phenazine biosynthesis PhzC/PhzF protein | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 3864377 | 1173 | - | 0.432225 |
| NA | Sde_1412 | rrf2 family protein | SubName: Full=Transcriptional regulator, BadM/Rrf2 family; | chromosome | CDS | 1830665 | 495 | + | 0.50101 |
| NA | Sde_3413 | conserved hypothetical protein | SubName: Full=RNA-binding region RNP-1; | chromosome | CDS | 4346599 | 252 | - | 0.456349 |
| NA | Sde_3429 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 4367048 | 939 | - | 0.445154 |
| NA | Sde_2540 | 2-oxo-acid dehydrogenase E1 component homodimeric type | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 3217671 | 924 | + | 0.453463 |
| NA | Sde_3707 | transcriptional regulator, PaiB-like | SubName: Full=Negative transcriptional regulator; | chromosome | CDS | 4691844 | 609 | + | 0.438424 |
| NA | Sde_3153 | AraC-type DNA-binding domain-containing proteins-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 4029857 | 1095 | + | 0.450228 |
| NA | Sde_0905 | transcriptional regulator; GntR | SubName: Full=Transcriptional regulator, LacI family; | chromosome | CDS | 1167555 | 1008 | + | 0.505952 |
| NA | Sde_2471 | sigma-24 (FecI-like) | SubName: Full=Sigma-70 region 2; | chromosome | CDS | 3121856 | 627 | + | 0.457735 |
| NA | Sde_0324 | conserved hypothetical protein | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 403488 | 1152 | + | 0.435764 |
| NA | Sde_3637 | Argininosuccinate lyase | RecName: Full=UPF0301 protein Sde_3637; | chromosome | CDS | 4615006 | 612 | + | 0.544118 |
| NA | Sde_2365 | sigma-24 (FecI-like) | SubName: Full=Sigma-70 region 4; | chromosome | CDS | 2994179 | 567 | + | 0.495591 |
| NA | Sde_0591 | transcriptional regulator, LacI family | SubName: Full=Transcriptional regulator, LacI family; | chromosome | CDS | 736120 | 1035 | + | 0.505314 |
| NA | Sde_3962 | fructokinases | SubName: Full=Fructokinase; EC=2.7.1.4; | chromosome | CDS | 4992676 | 891 | - | 0.436588 |
| NA | Sde_3179 | response regulator receiver domain protein (CheY-like) | RecName: Full=RNA polymerase sigma-54 factor; | chromosome | CDS | 4054172 | 1524 | + | 0.504593 |
| NA | Sde_0716 | putative transcriptional regulator, Fis family | RecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; | chromosome | CDS | 925981 | 1842 | - | 0.509229 |
| NA | Sde_0583 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 722139 | 696 | - | 0.494253 |
| NA | Sde_3718 | PhoU | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 4705546 | 927 | - | 0.532902 |
| NA | Sde_3885 | putative transcriptional regulator, TetR family | SubName: Full=Regulatory protein, TetR; | chromosome | CDS | 4903081 | 729 | + | 0.440329 |
| NA | Sde_0804 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 1049520 | 723 | + | 0.482711 |
| NA | Sde_2870 | putative transcriptional regulator, CadC | SubName: Full=Transcriptional regulatory protein-like protein; | chromosome | CDS | 3631790 | 1278 | + | 0.449139 |
| NA | Sde_1313 | putative acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 1704205 | 492 | + | 0.422764 |
| NA | Sde_2774 | LysR family transcriptional regulator | SubName: Full=LysR, substrate-binding; | chromosome | CDS | 3506253 | 897 | + | 0.554069 |
| NA | Sde_2864 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3623442 | 423 | + | 0.371158 |
| NA | Sde_3586 | Helix-turn-helix, AraC type | SubName: Full=Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ; | chromosome | CDS | 4546217 | 465 | + | 0.458065 |
| NA | Sde_0620 | ATP-dependent RNA helicase RhlB | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 783386 | 1179 | + | 0.49279 |
| NA | Sde_3674 | putative transcriptional regulator, TetR family | RecName: Full=Nucleoid occlusion factor SlmA; | chromosome | CDS | 4656948 | 600 | - | 0.451667 |
| NA | Sde_3441 | putative acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 4380686 | 528 | - | 0.488636 |
| NA | Sde_0994 | response regulator receiver domain protein (CheY-like) | SubName: Full=Regulatory protein, LuxR; | chromosome | CDS | 1275819 | 666 | - | 0.490991 |
| NA | Sde_3333 | hypothetical protein | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 4262085 | 528 | - | 0.511364 |
| NA | Sde_3287 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 4199547 | 771 | + | 0.512322 |
| NA | Sde_3900 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 4919225 | 786 | - | 0.451654 |
| NA | Sde_3525 | Cold shock protein | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 4479410 | 363 | - | 0.451791 |
| NA | Sde_0637 | metal dependent phosphohydrolase | SubName: Full=Metal dependent phosphohydrolase; | chromosome | CDS | 805502 | 882 | - | 0.511338 |
| NA | Sde_1571 | transcriptional regulator, XRE family | SubName: Full=Transcriptional regulator, XRE family; | chromosome | CDS | 2018239 | 684 | - | 0.453216 |
| NA | Sde_0439 | transketolase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 542084 | 441 | + | 0.380952 |
| NA | Sde_2769 | Phosphoribosylaminoimidazole carboxylase, ATPase subunit | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 3502323 | 894 | + | 0.5 |
| NA | Sde_0101 | conserved hypothetical protein | SubName: Full=Transcriptional regulator, BadM/Rrf2 family; | chromosome | CDS | 125617 | 441 | - | 0.412698 |
| NA | Sde_1673 | acyltransferase-like | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 2140537 | 963 | - | 0.425753 |
| NA | Sde_1258 | ATPase | SubName: Full=Transcriptional regulator, IclR family; | chromosome | CDS | 1610690 | 768 | - | 0.509115 |
| NA | Sde_3422 | response regulator receiver domain protein (CheY-like) | SubName: Full=LytTr DNA-binding region; | chromosome | CDS | 4355902 | 876 | - | 0.449772 |
| NA | Sde_2724 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 3452170 | 693 | + | 0.46176 |
| NA | Sde_0249 | sigma-24 (FecI-like) | SubName: Full=Sigma-70 region 2; | chromosome | CDS | 313116 | 558 | + | 0.492832 |
| NA | Sde_2296 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 2920726 | 669 | + | 0.4858 |
| NA | Sde_3696 | DNA-directed RNA polymerase, omega subunit | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome | CDS | 4681213 | 273 | + | 0.461538 |
| NA | Sde_3661 | putative acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 4642714 | 441 | + | 0.462585 |
| NA | Sde_2243 | Ribonuclease III | RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; | chromosome | CDS | 2850509 | 681 | - | 0.472834 |
| NA | Sde_3616 | GGDEF | SubName: Full=Helix-turn-helix, AraC type; | chromosome | CDS | 4587433 | 375 | - | 0.557333 |
| NA | Sde_3118 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 3983005 | 1692 | + | 0.428487 |
| NA | Sde_0925 | DNA-directed RNA polymerase | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 1191859 | 4233 | + | 0.468226 |
| NA | Sde_0954 | 1,4-alpha-glucan branching enzyme | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 1238684 | 768 | - | 0.532552 |
| NA | Sde_2181 | MCP methyltransferase, CheR-type | SubName: Full=MCP methyltransferase, CheR-type; | chromosome | CDS | 2774621 | 1347 | + | 0.429844 |
| NA | Sde_0706 | hypothetical protein | SubName: Full=Histone acetyltransferase HPA2/related acetyltransferase; | chromosome | CDS | 916345 | 303 | - | 0.40264 |
| NA | Sde_2238 | GTP diphosphokinase | SubName: Full=RelA/SpoT family protein; EC=2.7.6.5; | chromosome | CDS | 2842346 | 2241 | - | 0.465417 |
| NA | Sde_3668 | response regulator receiver domain protein (CheY-like) | SubName: Full=Two-component response regulator AlgR; | chromosome | CDS | 4650532 | 732 | - | 0.504098 |
| NA | Sde_2446 | response regulator receiver domain protein (CheY-like) | SubName: Full=Response regulator receiver; | chromosome | CDS | 3091329 | 675 | + | 0.417778 |
| NA | Sde_4004 | response regulator receiver domain protein (CheY-like) | SubName: Full=LytTr DNA-binding region; | chromosome | CDS | 5040116 | 810 | - | 0.439506 |
| NA | Sde_2179 | Flagellar basal-body rod protein FlgC | SubName: Full=Stage II sporulation E; | chromosome | CDS | 2772235 | 1728 | - | 0.438657 |
| NA | Sde_1320 | putative transcriptional regulator, TetR family | SubName: Full=Regulatory protein, TetR; | chromosome | CDS | 1714290 | 600 | + | 0.501667 |
| NA | Sde_3127 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 4000789 | 687 | - | 0.47016 |
| NA | Sde_3042 | transcriptional regulator, LacI family | SubName: Full=Transcriptional regulator, LacI family; | chromosome | CDS | 3889329 | 1029 | - | 0.48688 |
| NA | Sde_0799 | sigma-24 (FecI-like) | SubName: Full=Sigma-70 region 2; | chromosome | CDS | 1042885 | 819 | - | 0.515263 |
| NA | Sde_1926 | hypothetical protein | SubName: Full=Transcriptional regulator, XRE family; | chromosome | CDS | 2429001 | 249 | + | 0.502008 |
| NA | Sde_1505 | Rhs element Vgr protein | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 1939262 | 813 | + | 0.419434 |
| NA | Sde_2928 | AraC-type DNA-binding domain-containing proteins-like | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 3717738 | 1173 | + | 0.425405 |
| NA | Sde_1667 | CBS | SubName: Full=LysR, substrate-binding; | chromosome | CDS | 2135028 | 975 | + | 0.475897 |
| NA | Sde_3820 | response regulator receiver domain protein (CheY-like) | SubName: Full=Two component transcriptional regulator, LuxR family; | chromosome | CDS | 4820998 | 618 | - | 0.47411 |
| NA | Sde_3858 | regulatory protein, MarR | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 4862147 | 1182 | + | 0.44247 |
| NA | Sde_1550 | Integration host factor, alpha subunit | SubName: Full=Transcriptional regulator, AraC family; | chromosome | CDS | 1995367 | 1152 | + | 0.418403 |
| NA | Sde_0657 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 834206 | 894 | - | 0.475392 |
| NA | Sde_3717 | ATP-dependent DNA helicase RecG | SubName: Full=ATP-dependent DNA helicase RecG; | chromosome | CDS | 4703452 | 2088 | - | 0.538793 |
| NA | Sde_1647 | sigma-24 (FecI-like) | RecName: Full=RNA polymerase sigma factor; | chromosome | CDS | 2112497 | 1626 | - | 0.48647 |
| NA | Sde_3544 | General secretion pathway protein G | SubName: Full=Homoprotocatechuate degradation transcriptional regulator HpaR; | chromosome | CDS | 4502505 | 423 | - | 0.49409 |
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