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2024-05-24 00:11:28

Gene list

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COG category: Transcription
Genomic element: pSymA

Number of genes found: 131

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Sinorhizobium meliloti, 1021
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SMa1943 Putative transcriptional regulatorSubName: Full=Uncharacterized protein; pSymA CDS1103712 456 - 0.657895
NA SMa1835 Hypothetical protein pSymA CDS1041083 846 - 0.618203
NA SMa1476 Putative AraC-family transcription regulator pSymA CDS811255 993 - 0.63142
NA SMa2020 putative transcription regulatorSubName: Full=Transcriptional regulator; pSymA CDS1143618 468 - 0.58547
NA SMa1966 Putative LysR-family transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS1118218 1110 - 0.601802
NA SMa1413 Hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS777118 276 - 0.576087
NA SMa0347 putative LysR-type regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS188006 888 + 0.620495
NA SMa0985 putative LysR-family transcriptional regulator pSymA CDS547525 762 - 0.607612
NA SMa1442 Putative GntR-family transcription factorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS795334 765 - 0.640523
NA SMa2147 hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS1213698 891 - 0.567901
NA SMa1387 Putative LysR-type transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS764198 915 + 0.618579
NA SMa0319 putative AraC-type regulatorSubName: Full=Transcriptional regulator, AraC family; pSymA CDS177973 1002 + 0.595808
NA SMa2015 Putative transcriptional regulatorSubName: Full=Uncharacterized protein; pSymA CDS1141886 522 - 0.60728
NA SMa1956 Putative LysR-family transcriptional regulator pSymA CDS1111325 933 - 0.62701
NA SMa0520 conserved hypothetical proteinSubName: Full=Transcriptional regulator, RpiR family; pSymA CDS280693 843 + 0.608541
NA SMa1887 Putative transcriptional regulatorSubName: Full=Transcriptional regulator; pSymA CDS1074259 603 + 0.641791
NA SMa0065 putative GntR-family transcriptional regulatorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS35455 693 + 0.643579
NA SMa1176 Hypothetical protein pSymA CDS643876 585 - 0.591453
NA SMa2325 probable transcriptional regulatorSubName: Full=Response regulator; pSymA CDS1296390 693 - 0.649351
NA SMa1253 Hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS686450 270 + 0.577778
NA SMa0229 hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS128085 423 + 0.605201
NA SMa1550 putative response regulator of two-component systemSubName: Full=Response regulator; pSymA CDS857628 684 + 0.602339
NA SMa0750 probable LysR-family transcriptional activatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS403178 879 - 0.584755
NA SMa1823 Hypothetical proteinSubName: Full=Transcriptional regulator; pSymA CDS1034405 909 - 0.567657
NA SMa0097 putative transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS50138 942 - 0.660297
NA SMa2014 Putative transcriptional regulatorSubName: Full=Uncharacterized protein; pSymA CDS1141504 438 - 0.586758
NA SMa0824 hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS452858 468 + 0.621795
NA SMa1882 Putative transcriptional activatorSubName: Full=Transcriptional regulator; pSymA CDS1069239 660 - 0.592424
NA SMa2245 conserved hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS1257344 2538 - 0.499212
NA SMa0969 putative response regulator of two-component systemSubName: Full=Response regulator; pSymA CDS540997 750 + 0.556
NA SMa0179 putative transcriptional activatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS98400 918 - 0.624183
NA SMa0649 conserved domain of hypothetical protein pSymA CDS346459 201 + 0.616915
NA SMa1749 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; pSymA CDS991460 900 - 0.568889
NA SMa0594 hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS316428 1032 + 0.589147
NA SMa0372 putative LysR-type regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS199105 900 - 0.602222
NA SMa1720 putative LysR-family transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS970632 945 + 0.595767
NA SMa0062 putative GntR-family transcriptional regulatorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS32634 690 + 0.643478
NA SMa2008 Putative transcriptional regulatorSubName: Full=Transcriptional regulator, TetR family; pSymA CDS1137545 606 - 0.643564
NA SMa1660 putative acetyltransferaseSubName: Full=Uncharacterized protein; pSymA CDS926871 585 - 0.635897
NA SMa0039 probable LysR-family protein pSymA CDS23398 942 - 0.623142
NA SMa1979 Putative LysR-family transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS1124993 873 + 0.607102
NA SMa0557 LysR family transcriptional regulator, probableSubName: Full=Transcriptional regulator, LysR family; pSymA CDS295587 888 - 0.621622
NA SMa1625 putative LysR-family transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS904985 924 - 0.630952
NA SMa1299 Conserved hypothetical proteinSubName: Full=Transcriptional regulator, TetR family; pSymA CDS709054 612 + 0.604575
NA SMa1933 Putative transcriptional activator pSymA CDS1098786 615 - 0.661789
NA SMa0246 putative GntR-family transcriptional regulator pSymA CDS136418 702 + 0.615385
NA SMa0267 putative GntR-family regulatorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS150483 693 + 0.623377
NA SMa0206 putative two-component response regulatorSubName: Full=Response regulator; pSymA CDS113822 723 + 0.603043
NA SMa2341 putative LysR-family transcriptional regulator pSymA CDS1319298 876 - 0.626712
NA SMa1480 Probable LysR-type activator pSymA CDS813928 975 + 0.605128
NA SMa0222 putative GntR-family transcriptional regulatorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS122050 729 + 0.615912
NA SMa0307 putative LysR-type regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS172016 987 - 0.575481
NA SMa1987 Putative LysR-family transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS1127616 840 + 0.652381
NA SMa1505 Putative GntR-family transcriptional regulatorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS830383 786 + 0.645038
NA SMa1139 Truncated response regulator receiver domainSubName: Full=Response regulator, truncated; pSymA CDS620850 267 - 0.588015
NA SMa0232 hypothetical protein pSymA CDS128613 666 + 0.615616
NA SMa1349 Putative GntR-family transcriptional regulatorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS738144 693 - 0.608947
NA SMa1822 Hypothetical protein pSymA CDS1033278 1095 - 0.595434
NA SMa2107 probable GstR transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS1189053 906 - 0.559603
NA SMa0223 putative transcriptional regulator pSymA CDS122852 615 - 0.630894
NA SMa0498 putative LysR-type regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS271057 900 - 0.593333
NA SMa1954 Putative LysR-family transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS1109860 984 + 0.601626
NA SMa2227 Putative histidine utilization repressor protein pSymA CDS1247113 948 - 0.552743
NA SMa2151 probable DNA-binding protein pSymA CDS1215193 432 + 0.56713
NA SMa0126 putative cold shock proteinSubName: Full=CspA8 Cold shock family protein; pSymA CDS68805 210 + 0.566667
NA SMa1138 Truncated response regulatorSubName: Full=Response regulator, truncated; pSymA CDS620365 492 - 0.587398
NA SMa0789 hypothetical protein pSymA CDS429807 330 + 0.572727
NA SMa2163 hypothetical protein pSymA CDS1218761 729 + 0.59808
NA SMa0402 putative GntR-type regulatorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS217871 732 + 0.618852
NA SMa1725 putative AraC-family transcriptional regulator pSymA CDS973132 639 + 0.56964
NA SMa0535 hypothetical protein pSymA CDS287402 174 - 0.626437
NA SMa1454 Putative transcription factor pSymA CDS801272 1071 + 0.634921
NA SMa1056 Putative transcriptional regulatorSubName: Full=Transcriptional regulator, ArsR family; pSymA CDS577474 348 - 0.609195
NA SMa2167 hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS1221480 468 + 0.557692
NA SMa1428 putative TetR/AcrR-family transcriptional regulatorSubName: Full=Transcriptional regulator, TetR family; pSymA CDS786798 660 + 0.562121
NA SMa2387 hypothetical protein pSymA CDS1348415 657 + 0.601218
NA SMa0190 hypothetical proteinSubName: Full=Putative transcriptional regulator; pSymA CDS104560 630 + 0.579365
NA SMa0303 putative LysR type regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS169064 879 + 0.623436
NA SMa1736 putative LysR-family transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS981384 882 - 0.586168
NA SMa2269 hypothetical protein pSymA CDS1267896 267 + 0.595506
NA SMa0353 putative LysR-type regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS190833 915 + 0.608743
NA SMa0717 putative calcium binding transcriptional regulatory proteinSubName: Full=Uncharacterized protein; pSymA CDS389265 1710 + 0.654386
NA SMa1825 Hypothetical proteinSubName: Full=Transcriptional regulator; pSymA CDS1035458 909 - 0.594059
NA SMa1867 Putative AsnC (lrp)-family transcriptional activatorSubName: Full=Transcriptional regulator, AsnC/Lrp family; pSymA CDS1060211 477 - 0.555556
NA SMa0149 hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS81858 483 + 0.590062
NA SMa1654 putative GntR-family transcriptional regulatorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS924741 699 + 0.58083
NA SMa1602 putative LysR-family transcriptional regulator pSymA CDS893872 909 - 0.592959
NA SMa2004 putative ROK-family transcriptional regulatorSubName: Full=Transcriptional regulator, ROK family; pSymA CDS1136007 1074 + 0.630354
NA SMa0078 putative LacI-family transcriptional regulatorSubName: Full=Transcriptional regulator, LacI family; pSymA CDS40959 1023 + 0.624633
NA SMa0193 hypothetical protein pSymA CDS106326 267 - 0.588015
NA SMa1853 Hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS1051670 852 + 0.66784
NA SMa0063 putative GntR-family transcriptional regulator pSymA CDS33372 816 + 0.609069
NA SMa2303 putative ROK family transcriptional regulatorSubName: Full=Transcriptional regulator, ROK family; pSymA CDS1283423 1227 - 0.624287
NA SMa1960 Conserved hypothetical protein pSymA CDS1114922 378 + 0.608466
NA SMa1828 Putative transcriptional activatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS1036363 1152 - 0.598958
NA SMa0310 putative LysR-type transcriptional regulatorSubName: Full=Uncharacterized protein; pSymA CDS174273 732 - 0.601093
NA SMa1726 putative transcriptional regulator pSymA CDS973914 657 - 0.570776
NA SMa1323 Hypothetical proteinSubName: Full=Transcription regulator; pSymA CDS721436 369 + 0.547425
NA SMa0355 putative LysR-type regulator pSymA CDS191811 606 + 0.572607
NA SMa1900 Hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS1079608 558 + 0.586021
NA SMa1632 putative LysR-family transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS907961 954 + 0.580713
NA SMa0021 hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS14450 645 - 0.55969
NA SMa1782 Putative LysR-family transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS1009854 894 + 0.616331
NA SMa0281 putative regulator, MerR familySubName: Full=Transcriptional regulator, MerR/CueR family; pSymA CDS158400 405 + 0.592593
NA SMa2133 hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS1205622 792 - 0.568182
NA SMa2215 putative GntR-family transcriptional regulatorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS1240820 768 + 0.615885
NA SMa1893 Putative LysR-family transcriptional activatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS1075895 876 + 0.630137
NA SMa1076 Hypothetical protein pSymA CDS587855 459 - 0.566449
NA SMa1759 putative GntR-family transcriptional regulatorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS999887 681 - 0.628488
NA SMa2293 probable beta lactamase transcriptional activatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS1274593 885 - 0.60678
NA SMa2049 putative LacI-family transcription regulatorSubName: Full=Uncharacterized protein; pSymA CDS1158529 1083 + 0.633426
NA SMa2381 hypothetical protein pSymA CDS1344998 474 + 0.594937
NA SMa2287 putative LysR-family transcriptional regulator pSymA CDS1271938 948 - 0.661392
NA SMa0160 putative GntR-family transcription regulatorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS88416 675 + 0.604444
NA SMa2275 hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS1268802 276 - 0.561594
NA SMa1493 Putative LysR-type transcription factorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS822713 924 + 0.601732
NA SMa0144 hypothetical proteinSubName: Full=Uncharacterized protein; pSymA CDS79504 786 + 0.648855
NA SMa0961 putative response regulator of two-component systemSubName: Full=Response regulator; pSymA CDS538682 723 + 0.578147
NA SMa2027 Putative LysR-family transcriptional regulatorSubName: Full=Transcriptional regulator, LysR family; pSymA CDS1147165 894 - 0.637584
atrA SMa0955 AtrA transcriptional regulatorSubName: Full=Transcriptional regulator, GntR family; pSymA CDS534018 693 + 0.574315
cspA5 SMa0181 probable CspA5 cold shock protein transcriptional regulatorSubName: Full=CspA7 cold shock protein; pSymA CDS100505 204 - 0.509804
cspA6 SMa0738 probable CspA6 cold shock protein transcriptional regulatorSubName: Full=CspA6 cold shock protein; pSymA CDS396650 204 - 0.544118
hmrR SMa1014 HmrR heavy metal dependent transcriptional regulatorRecName: Full=Heavy metal-dependent transcription regulator 1; pSymA CDS563252 417 + 0.609113
nifA SMa0815 NifA transcriptional activator pSymA CDS445895 1572 - 0.556616
nodD1 SMa0870 NodD1 transcription regulatorRecName: Full=Nodulation protein D 1; pSymA CDS481810 927 + 0.555556
nodD2 SMa0757 NodD2 nod box-dependent transcription activatorRecName: Full=Nodulation protein D 2; pSymA CDS409254 933 + 0.572347
nodD3 SMa0840 NodD3 transcriptional regulatorRecName: Full=Nodulation protein D 3; pSymA CDS462751 942 - 0.557325
repB2 SMa2393 RepB2 replication protein pSymA CDS1351362 1014 - 0.574951
rhrA SMa2412 RhrA transcriptional activatorRecName: Full=Transcriptional activator RhrA; pSymA CDS1314632 945 - 0.583069
rpoE6 SMa0143 putative RpoE6 RNA polymerase sigma factor pSymA CDS78902 606 + 0.605611
syrM SMa0849 SyrM transcriptional regulatorRecName: Full=HTH-type transcriptional regulator SyrM; AltName: Full=Symbiotic regulator; pSymA CDS466418 981 + 0.61366