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2024-06-15 23:33:24

Gene list

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COG category: Transcription
Genomic element: chromosome

Number of genes found: 28

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Tropheryma whipplei TW08/27, TW08/27
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA TW742 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS838028 1164 + 0.480241
NA TW534 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS571987 477 - 0.484277
NA TW130 putative helicase regulatorSubName: Full=Putative helicase regulator; chromosome CDS134760 2073 + 0.485769
NA TW535 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS572506 678 - 0.432153
NA TW071 putative regulatorSubName: Full=Putative regulator; chromosome CDS62354 294 + 0.408163
NA TW533 conserved hypothetical proteinRecName: Full=Transcriptional repressor NrdR; chromosome CDS571543 444 - 0.472973
NA TW421 putative CarD-family transcriptional regulatorSubName: Full=Putative CarD-family transcriptional regulator; chromosome CDS459221 483 + 0.484472
NA TW057 cold shock protein BSubName: Full=Cold shock protein B; chromosome CDS47266 378 + 0.505291
NA TW788 putative serine/threonine-protein kinaseSubName: Full=Putative serine/threonine-protein kinase; chromosome CDS892514 1758 + 0.506257
NA TW055 putative two component system response regulatorSubName: Full=Putative two component system response regulator; chromosome CDS46318 684 - 0.476608
NA TW165 putative serine/threonine protein kinaseSubName: Full=Putative serine/threonine protein kinase; chromosome CDS203335 1197 + 0.444444
glk TW558 glucokinaseSubName: Full=Glucokinase; EC=2.7.1.2; chromosome CDS594860 918 - 0.461874
greA TW699 transcription elongation factor GreASubName: Full=Transcription elongation factor GreA; chromosome CDS791384 489 + 0.501023
hrdB TW263 RNA polymerase principal sigma factor hrdbRecName: Full=RNA polymerase sigma factor SigA; chromosome CDS296144 1164 + 0.512028
hspR TW759 heat shock regulator protein HspRSubName: Full=Heat shock regulator protein HspR; chromosome CDS856754 393 - 0.493639
ideR TW124 iron-dependent repressorSubName: Full=Iron-dependent repressor; chromosome CDS130688 654 + 0.448012
mfd TW589 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS662858 3747 - 0.430478
nusA TW615 N utilization transcriptional termination/antitermination factorSubName: Full=N utilization transcriptional termination/antitermination factor; chromosome CDS700744 960 - 0.489583
nusG TW732 transcription antitermination protein NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS826165 618 - 0.459547
parB TW811 putative chromosome partitioning protein ParBSubName: Full=Putative chromosome partitioning protein ParB; chromosome CDS919509 876 - 0.505708
recG TW195 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; chromosome CDS232840 2022 + 0.472799
relA TW496 GTP pyrophosphokinaseSubName: Full=GTP pyrophosphokinase; EC=2.7.6.5; chromosome CDS533898 2223 - 0.442195
rho TW332 transcription termination factor RhoSubName: Full=Transcription termination factor Rho; chromosome CDS364090 1365 + 0.497436
rnc TW199 ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS237204 648 + 0.458333
rpoA TW232 DNA-directed RNA polymerase alpha chainRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS257011 984 + 0.474593
rpoB TW081 DNA-directed RNA polymerase beta chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS73945 3468 + 0.504614
rpoC TW082 DNA-directed RNA polymerase beta' chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS77472 3828 + 0.490073
rpoZ TW407 DNA-directed RNA polymerase omega chainRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS445147 258 + 0.457364