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2024-06-01 08:10:49

Gene list

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COG category: Transcription
Genomic element: chromosome

Number of genes found: 102

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Synechococcus elongatus PCC 6301, PCC6301
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA syc1525_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1646558 516 + 0.534884
NA syc2366_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2517983 1452 - 0.512397
NA syc1977_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2119902 855 + 0.561404
NA syc0835_d hypothetical proteinRecName: Full=Transcriptional repressor NrdR; chromosome CDS932030 507 + 0.540434
NA syc1631_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1760393 1389 - 0.586753
NA syc2358_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2512831 645 + 0.584496
NA syc2172_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2317881 501 + 0.580838
NA syc0924_d transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS1032473 603 + 0.573798
NA syc0757_d serine/threonine kinaseSubName: Full=Serine/threonine kinase; chromosome CDS846910 1374 + 0.558952
NA syc0772_d transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS863481 399 + 0.493734
NA syc0878_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS976212 486 + 0.557613
NA syc0629_d putative acetyltransferaseSubName: Full=Putative acetyltransferase; chromosome CDS699027 495 + 0.59798
NA syc2291_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2443906 1623 + 0.566851
NA syc1834_d transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS1984099 276 + 0.583333
NA syc0799_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS893180 210 - 0.57619
NA syc0259_c serine/threonine kinaseSubName: Full=Serine/threonine kinase; chromosome CDS300498 1686 - 0.568209
NA syc0743_d similar to chloroplast membrane-associated 30 kD proteinSubName: Full=Similar to chloroplast membrane-associated 30 kD protein; chromosome CDS830637 774 + 0.565891
NA syc1120_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1231262 1125 - 0.564444
NA syc2285_d hypothetical proteinRecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; chromosome CDS2440092 744 + 0.55914
NA syc0869_d carboxyl-terminal proteaseSubName: Full=Carboxyl-terminal protease; chromosome CDS965512 1506 + 0.602258
NA syc0428_d serine/threonine kinaseSubName: Full=Serine/threonine kinase; chromosome CDS480181 2160 + 0.593056
NA syc2338_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2494696 465 + 0.617204
NA syc0160_c unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS175074 420 - 0.540476
NA syc2137_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2286904 372 + 0.580645
NA syc1091_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1204794 552 + 0.565217
NA syc0602_d unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS675167 351 + 0.549858
NA syc1058_d putative acetyltransferaseSubName: Full=Putative acetyltransferase; chromosome CDS1172102 474 + 0.548523
NA syc1414_c transcription factorSubName: Full=Transcription factor; chromosome CDS1531164 984 - 0.563008
NA syc0841_c transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS936811 339 - 0.589971
NA syc1638_c two-component system response regulatorSubName: Full=Two-component system response regulator; chromosome CDS1769228 621 - 0.58132
NA syc0179_c GTP pyrophosphokinaseSubName: Full=GTP pyrophosphokinase; chromosome CDS200921 2295 - 0.534641
NA syc0744_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS831609 669 + 0.499253
NA syc2452_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2616218 456 + 0.486842
NA syc2096_d penicillin-binding proteinSubName: Full=Penicillin-binding protein; chromosome CDS2246850 2223 + 0.595592
NA syc2056_d transcription regulatorSubName: Full=Transcription regulator; chromosome CDS2208970 693 + 0.463203
NA syc0923_d similar to serine/threonine kinaseSubName: Full=Similar to serine/threonine kinase; chromosome CDS1030817 1533 + 0.567515
NA syc1282_d putative acetyltransferaseSubName: Full=Putative acetyltransferase; chromosome CDS1392954 525 + 0.565714
NA syc0703_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS788038 651 + 0.569892
NA syc2513_d nitrogen assimilation regulatory proteinSubName: Full=Nitrogen assimilation regulatory protein; chromosome CDS2683467 2517 + 0.572507
NA syc0104_c two-component response regulator for energy transfer from phycobilisomes to photosystemsSubName: Full=Two-component response regulator for energy transfer from phycobilisomes to photosystems; chromosome CDS113664 657 - 0.579909
NA syc0438_d serine/threonine kinaseSubName: Full=Serine/threonine kinase; chromosome CDS491357 1584 + 0.584596
NA syc0775_c unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS866917 531 - 0.33145
NA syc0005_d putative ribonuclease IISubName: Full=Putative ribonuclease II; chromosome CDS2459 1398 + 0.567239
NA syc0604_c transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS676266 327 - 0.574924
NA syc2221_c two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS2370973 681 - 0.453745
NA syc0151_d two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS164716 690 + 0.588406
NA syc2392_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2551622 342 - 0.55848
NA syc2380_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2536203 573 - 0.612565
NA syc0581_c Cell envelope-related transcriptional attenuatorSubName: Full=Cell envelope-related transcriptional attenuator; chromosome CDS650856 1014 - 0.579882
NA syc1728_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1871860 855 - 0.596491
NA syc0391_d transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS427513 501 + 0.566866
NA syc1550_c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1677750 561 - 0.56328
NA syc0666_d putative SNF2 helicaseSubName: Full=Putative SNF2 helicase; chromosome CDS743416 3060 + 0.569935
NA syc0227_c transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS260107 3462 - 0.585789
NA syc0243_c ndhF3 operon transcriptional regulatorRecName: Full=HTH-type transcriptional activator CmpR; chromosome CDS282753 972 - 0.539095
NA syc2175_d unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS2321711 762 + 0.566929
NA syc0520_d similar to fibronectin binding proteinSubName: Full=Similar to fibronectin binding protein; chromosome CDS579079 1755 + 0.578917
NA syc0194_c probable transcription regulatorSubName: Full=Probable transcription regulator; chromosome CDS219748 1311 - 0.568268
NA syc0771_d unknown proteinSubName: Full=Uncharacterized protein; chromosome CDS863273 240 + 0.5
NA syc2074_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2226649 294 + 0.608844
NA syc0709_d hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS794863 657 + 0.550989
NA syc0806_c putative helicaseSubName: Full=Putative helicase; chromosome CDS900796 1410 - 0.605674
hrcA syc0908_c heat-inducible transcriptional repressorRecName: Full=Heat-inducible transcription repressor HrcA; chromosome CDS1013573 1062 - 0.588512
hypB syc1558_d hydrogenase isoenzymes formation protein HypBSubName: Full=Hydrogenase isoenzymes formation protein HypB; chromosome CDS1683924 729 + 0.580247
lrrA syc1688_d transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS1825510 885 + 0.59209
nblR syc1796_c two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1943027 687 - 0.500728
ntcB syc0308_c nitrate assimilation transcriptional activatorSubName: Full=Nitrate assimilation transcriptional activator; chromosome CDS353747 930 - 0.563441
nusA syc2073_d N utilization substance protein ASubName: Full=N utilization substance protein A; chromosome CDS2225327 1326 + 0.566365
nusB syc1633_c N utilization substance protein BRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS1763532 642 - 0.58567
nusG syc0890_d transcription antitermination protein NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS993944 630 + 0.544444
pex syc0852_d circadian period extender geneSubName: Full=Circadian period extender protein; chromosome CDS948343 447 + 0.550336
rbcR syc2116_c LysR family transcriptional regulatorSubName: Full=LysR family transcriptional regulator; chromosome CDS2265136 990 - 0.572727
recG syc0470_c ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; chromosome CDS529653 2454 - 0.568052
rnb syc0425_c ribonuclease IISubName: Full=Ribonuclease II; chromosome CDS477504 2013 - 0.582216
rnc syc2441_c ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; chromosome CDS2602974 744 - 0.579301
rpaA syc1409_d two-component response regulator for energy transfer from phycobilisomes to photosystemsSubName: Full=Two-component response regulator for energy transfer from phycobilisomes to photosystems; chromosome CDS1527543 750 + 0.574667
rpoA syc1888_d RNA polymerase alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS2029294 930 + 0.576344
rpoB syc2507_d RNA polymerase beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS2670954 3303 + 0.574932
rpoC1 syc2508_d RNA polymerase gamma-subunitRecName: Full=DNA-directed RNA polymerase subunit gamma; Short=RNAP subunit gamma; EC=2.7.7.6; AltName: Full=RNA polymerase subunit gamma; AltName: Full=Transcriptase subunit gamma; chromosome CDS2674375 1875 + 0.553067
rpoC2 syc2509_d RNA polymerase beta prime subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS2676319 3957 + 0.57392
rpoD1 syc0879_d principal RNA polymerase sigma factor RpoD1RecName: Full=RNA polymerase sigma factor SigA; chromosome CDS976905 1200 + 0.559167
rpoD2 syc2345_d group2 RNA polymerase sigma factor RpoD2SubName: Full=Group2 RNA polymerase sigma factor RpoD2; chromosome CDS2499488 963 + 0.542056
rpoD3 syc0857_c group2 RNA polymerase sigma factor RpoD3SubName: Full=Group2 RNA polymerase sigma factor RpoD3; chromosome CDS953022 981 - 0.550459
rpoD4 syc0953_d group2 RNA polymerase sigma factor RpoD4RecName: Full=RNA polymerase sigma factor; chromosome CDS1069226 936 + 0.527778
rpoD5 syc2245_c group2 RNA polymerase sigma factor RpoD5RecName: Full=RNA polymerase sigma factor; chromosome CDS2399234 1197 - 0.52548
rpoD6 syc0015_c group2 RNA polymerase sigma factor RpoD6RecName: Full=RNA polymerase sigma factor; chromosome CDS14434 951 - 0.559411
rpoZ syc2381_c RNA polymerase subunit omega (rpoZ)RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS2536772 231 - 0.519481
sigF1 syc2495_c group3 RNA polymerase sigma factor SigF1SubName: Full=Group3 RNA polymerase sigma factor SigF1; chromosome CDS2657624 780 - 0.560256
sigF2 syc2309_c group3 RNA polymerase sigma factor SigF2SubName: Full=Group3 RNA polymerase sigma factor SigF2; chromosome CDS2463740 828 - 0.543478
sigG syc2171_d group3 RNA polymerase ECF-type sigma factor SigGSubName: Full=Group3 RNA polymerase ECF-type sigma factor SigG; chromosome CDS2317141 657 + 0.578387
sigI syc2091_c group3 RNA polymerase ECF-type sigma factor SigISubName: Full=Group3 RNA polymerase ECF-type sigma factor SigI; chromosome CDS2243412 591 - 0.549915
sphR syc0533_d phosphate sensor two-component response regulatorSubName: Full=Phosphate sensor two-component response regulator; chromosome CDS596063 774 + 0.564599
srrA syc1690_d two-component response regulator for energy transfer from phycobilisomes to photosystemsSubName: Full=Two-component response regulator for energy transfer from phycobilisomes to photosystems; chromosome CDS1827820 768 + 0.579427
srrB syc0965_d two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1081660 714 + 0.542017
tenA syc0455_d transcriptional activator TenASubName: Full=Transcriptional activator TenA; chromosome CDS508268 618 + 0.563107
umuD syc0007_d DNA polymerase VSubName: Full=DNA polymerase V; chromosome CDS7099 561 + 0.554367
xylR syc1981_c xylose repressorSubName: Full=Xylose repressor; chromosome CDS2124098 909 - 0.614962
ycf29 syc2234_d two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS2385868 708 + 0.543785
ycf52 syc1858_c hypothetical protein YCF52SubName: Full=Uncharacterized protein; chromosome CDS2010538 531 - 0.570621
ycf52 syc0763_d hypothetical protein YCF52SubName: Full=Uncharacterized protein; chromosome CDS854644 633 + 0.551343
zam syc2184_d protein conferring resistance to acetazolamide ZamSubName: Full=Protein conferring resistance to acetazolamide Zam; chromosome CDS2328427 2247 + 0.574099
ziaR syc0262_c zinc-responsive repressor ZiaRSubName: Full=Zinc-responsive repressor ZiaR; chromosome CDS306874 369 - 0.552846