Gene list
Applied filters:
COG category: Transcription
Genomic element: chromosome 1
Number of genes found: 91
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| Thermus thermophilus HB8, HB8 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| TTHA0008 | phage shock protein A | SubName: Full=Phage shock protein A; | chromosome 1 | CDS | 8037 | 663 | - | 0.666667 | |
| TTHA0020 | response regulator | SubName: Full=Response regulator; | chromosome 1 | CDS | 20401 | 672 | - | 0.703869 | |
| TTHA0032 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 34463 | 243 | + | 0.683128 | |
| TTHA0051 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 50129 | 855 | + | 0.719298 | |
| TTHA0055 | ATP-dependent DNA helicase RecG-related protein | SubName: Full=ATP-dependent DNA helicase RecG-related protein; | chromosome 1 | CDS | 52922 | 1536 | - | 0.713542 | |
| TTHA0058 | transcriptional repressor of class I heat-shock genes | RecName: Full=Heat-inducible transcription repressor hrcA; | chromosome 1 | CDS | 56365 | 903 | + | 0.72536 | |
| TTHA0073 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 68490 | 264 | - | 0.738636 | |
| TTHA0101 | transcriptional repressor, TetR family | SubName: Full=Transcriptional repressor, TetR family; | chromosome 1 | CDS | 101955 | 618 | - | 0.695793 | |
| TTHA0109 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome 1 | CDS | 108345 | 1554 | - | 0.723295 | |
| TTHA0123 | transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome 1 | CDS | 123473 | 954 | + | 0.691824 | |
| TTHA0134 | ATP-cone domain protein | RecName: Full=Transcriptional repressor NrdR; | chromosome 1 | CDS | 130735 | 462 | + | 0.662338 | |
| TTHA0145 | phosphate regulon transcriptional regulatory protein PhoB | SubName: Full=Phosphate regulon transcriptional regulatory protein PhoB; | chromosome 1 | CDS | 141373 | 672 | - | 0.74256 | |
| TTHA0156 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 149814 | 297 | + | 0.693603 | |
| TTHA0167 | transcriptional regulator (TetR/AcrR family) | SubName: Full=Transcriptional regulator (TetR/AcrR family); | chromosome 1 | CDS | 162660 | 570 | + | 0.694737 | |
| TTHA0168 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 163226 | 495 | + | 0.69697 | |
| TTHA0169 | 'hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 163895 | 567 | - | 0.675485 | |
| TTHA0175 | cold shock protein | SubName: Full=Cold shock protein; | chromosome 1 | CDS | 169065 | 222 | + | 0.644144 | |
| TTHA0176 | probable acetyltransferase | SubName: Full=Probable acetyltransferase; | chromosome 1 | CDS | 169360 | 474 | + | 0.700422 | |
| TTHA0186 | probable transcriptional regulator | SubName: Full=Probable transcriptional regulator; | chromosome 1 | CDS | 183132 | 858 | + | 0.734266 | |
| TTHA0248 | transcription antitermination protein NusG | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome 1 | CDS | 238005 | 555 | - | 0.659459 | |
| TTHA0299 | glucokinase | SubName: Full=Glucokinase; | chromosome 1 | CDS | 288535 | 909 | + | 0.746975 | |
| TTHA0359 | cold shock protein | SubName: Full=Cold shock protein; | chromosome 1 | CDS | 339710 | 207 | + | 0.618357 | |
| TTHA0411 | alpha-aminoadipate aminotransferase | SubName: Full=Alpha-aminoadipate aminotransferase; | chromosome 1 | CDS | 389901 | 1194 | - | 0.69263 | |
| TTHA0455 | rrf2 family protein, transcriptional regulator | SubName: Full=Rrf2 family protein, transcriptional regulator; | chromosome 1 | CDS | 426818 | 450 | + | 0.713333 | |
| TTHA0507 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome 1 | CDS | 472179 | 825 | + | 0.711515 | |
| TTHA0508 | transcriptional regulator, MerR family | SubName: Full=Transcriptional regulator, MerR family; | chromosome 1 | CDS | 473046 | 702 | + | 0.665242 | |
| TTHA0532 | RNA polymerase pricipal sigma factor (RpoD) | RecName: Full=RNA polymerase sigma factor SigA; | chromosome 1 | CDS | 494266 | 1272 | - | 0.663522 | |
| TTHA0544 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 509022 | 237 | + | 0.624473 | |
| TTHA0608 | probable RNA-biniding protein | SubName: Full=Probable RNA-biniding protein; | chromosome 1 | CDS | 575671 | 1551 | - | 0.698904 | |
| TTHA0622 | transcription elongation factor GreA | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome 1 | CDS | 594406 | 468 | + | 0.655983 | |
| TTHA0655 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 622356 | 603 | + | 0.726368 | |
| TTHA0689 | putative xylose repressor [C-terminal] | SubName: Full=Putative xylose repressor [C-terminal]; | chromosome 1 | CDS | 651965 | 1074 | - | 0.741155 | |
| TTHA0700 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 664045 | 276 | - | 0.692029 | |
| TTHA0701 | N utilization substance protein A (NusA) | RecName: Full=Transcription termination/antitermination protein NusA; | chromosome 1 | CDS | 664317 | 1164 | - | 0.66323 | |
| TTHA0705 | transcriptional repressor SmtB | SubName: Full=Transcriptional repressor SmtB; | chromosome 1 | CDS | 668690 | 372 | + | 0.701613 | |
| TTHA0725 | membrane-bound protein LytR | SubName: Full=Membrane-bound protein LytR; | chromosome 1 | CDS | 687608 | 1146 | + | 0.732112 | |
| TTHA0733 | transcriptional regulator MarR family | SubName: Full=Transcriptional regulator MarR family; | chromosome 1 | CDS | 699691 | 435 | - | 0.708046 | |
| TTHA0754 | transcriptional repressor | SubName: Full=Transcriptional repressor; | chromosome 1 | CDS | 720304 | 660 | - | 0.719697 | |
| TTHA0790 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome 1 | CDS | 756557 | 627 | - | 0.730462 | |
| TTHA0792 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 758243 | 534 | - | 0.722846 | |
| TTHA0807 | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome 1 | CDS | 770589 | 1035 | - | 0.714976 | |
| TTHA0814 | putative response regulator | SubName: Full=Putative response regulator; | chromosome 1 | CDS | 777945 | 363 | - | 0.705234 | |
| TTHA0845 | probable transcriptional regulator, AsnC family | SubName: Full=Probable transcriptional regulator, AsnC family; | chromosome 1 | CDS | 810772 | 279 | - | 0.702509 | |
| TTHA0889 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome 1 | CDS | 845828 | 2937 | + | 0.695608 | |
| TTHA0910 | exoribonuclease | RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; | chromosome 1 | CDS | 869399 | 2235 | + | 0.687248 | |
| TTHA0953 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 899050 | 435 | + | 0.733333 | |
| TTHA0973 | transcriptional regulator, TetR family | SubName: Full=Transcriptional regulator, TetR family; | chromosome 1 | CDS | 916774 | 612 | - | 0.686275 | |
| TTHA0981 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 925048 | 324 | + | 0.716049 | |
| TTHA0995 | response regulator | SubName: Full=Response regulator; | chromosome 1 | CDS | 939555 | 969 | + | 0.718266 | |
| TTHA1002 | response regulator | SubName: Full=Response regulator; | chromosome 1 | CDS | 948268 | 723 | + | 0.719225 | |
| TTHA1009 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 955973 | 315 | + | 0.679365 | |
| TTHA1017 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 964695 | 1356 | - | 0.620206 | |
| TTHA1019 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 967287 | 366 | - | 0.568306 | |
| TTHA1020 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 967685 | 3333 | - | 0.668167 | |
| TTHA1030 | response regulator | SubName: Full=Response regulator; | chromosome 1 | CDS | 980110 | 579 | + | 0.723661 | |
| TTHA1042 | anti-cleavage anti-GreA transcription factor Gfh1 | RecName: Full=Transcription inhibitor protein Gfh1; AltName: Full=Anti-cleavage anti-GreA transcription factor; AltName: Full=Gre factor homolog 1; | chromosome 1 | CDS | 989398 | 471 | - | 0.681529 | |
| TTHA1065 | transcription termination factor Rho | RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; | chromosome 1 | CDS | 1011662 | 1281 | - | 0.672131 | |
| TTHA1121 | N-utilization substance protein B | RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; | chromosome 1 | CDS | 1066744 | 456 | - | 0.699561 | |
| TTHA1142 | response regulator receiver domain protein | SubName: Full=Response regulator receiver domain protein; | chromosome 1 | CDS | 1086288 | 357 | - | 0.714286 | |
| TTHA1155 | mercuric resistance operon regulatory protein (MerR) | SubName: Full=Mercuric resistance operon regulatory protein (MerR); | chromosome 1 | CDS | 1100198 | 429 | - | 0.703963 | |
| TTHA1209 | probable acetyltransferase | SubName: Full=Probable acetyltransferase; | chromosome 1 | CDS | 1150803 | 528 | - | 0.679924 | |
| TTHA1244 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1179135 | 306 | - | 0.686275 | |
| TTHA1266 | DNA helicase RecG | SubName: Full=DNA helicase RecG; | chromosome 1 | CDS | 1207342 | 2313 | + | 0.69693 | |
| TTHA1284 | serine/threonine protein kinase, putative | SubName: Full=Serine/threonine protein kinase, putative; | chromosome 1 | CDS | 1223654 | 615 | + | 0.710569 | |
| TTHA1350 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1290216 | 843 | - | 0.740214 | |
| TTHA1352 | response regulator | SubName: Full=Response regulator; | chromosome 1 | CDS | 1292060 | 648 | - | 0.66358 | |
| TTHA1362 | response regulator | SubName: Full=Response regulator; | chromosome 1 | CDS | 1299630 | 684 | + | 0.701754 | |
| TTHA1370 | serine/threonine-protein kinase-related protein | SubName: Full=Serine/threonine-protein kinase-related protein; | chromosome 1 | CDS | 1306976 | 762 | + | 0.723097 | |
| TTHA1374 | conserved hypothetical protein | RecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; | chromosome 1 | CDS | 1310324 | 759 | + | 0.699605 | |
| TTHA1376 | HD domain protein | SubName: Full=HD domain protein; | chromosome 1 | CDS | 1312180 | 1407 | + | 0.642502 | |
| TTHA1392 | Sir2 family protein | RecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; | chromosome 1 | CDS | 1327678 | 765 | - | 0.709804 | |
| TTHA1488 | DafA protein (DnaK-DnaJ assembly factor A) | RecName: Full=Protein DafA; AltName: Full=DnaK-DnaJ assembly factor A; | chromosome 1 | CDS | 1415492 | 237 | - | 0.675106 | |
| TTHA1502 | response regulator | SubName: Full=Response regulator; | chromosome 1 | CDS | 1430910 | 684 | + | 0.650585 | |
| TTHA1534 | ribonuclease II family protein | SubName: Full=Ribonuclease II family protein; | chromosome 1 | CDS | 1459112 | 1797 | + | 0.721758 | |
| TTHA1559 | arginine repressor/activator | RecName: Full=Arginine repressor; | chromosome 1 | CDS | 1483515 | 495 | - | 0.707071 | |
| TTHA1561 | probable DNA-directed RNA polymerase omega chain (RpoZ) | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome 1 | CDS | 1485216 | 300 | - | 0.64 | |
| TTHA1580 | transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome 1 | CDS | 1503315 | 663 | - | 0.723982 | |
| TTHA1581 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1504025 | 891 | - | 0.684624 | |
| TTHA1593 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1515295 | 651 | - | 0.694316 | |
| TTHA1594 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; | chromosome 1 | CDS | 1515942 | 1959 | - | 0.718224 | |
| TTHA1664 | DNA-directed RNA polymerase alpha chain | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome 1 | CDS | 1576710 | 948 | - | 0.670886 | |
| TTHA1717 | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (ppGpp synthase) | SubName: Full=Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase (PpGpp synthase); | chromosome 1 | CDS | 1611926 | 2184 | + | 0.692766 | |
| TTHA1722 | putative response regulator | SubName: Full=Putative response regulator; | chromosome 1 | CDS | 1617531 | 678 | + | 0.669617 | |
| TTHA1776 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1663939 | 309 | - | 0.682848 | |
| TTHA1778 | LytR/CspA/Psr family protein | SubName: Full=LytR/CspA/Psr family protein; | chromosome 1 | CDS | 1664596 | 1098 | - | 0.736794 | |
| TTHA1812 | DNA-directed RNA polymerase beta' chain (RpoC) | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome 1 | CDS | 1689655 | 4575 | - | 0.680656 | |
| TTHA1813 | DNA-directed RNA polymerase beta chain (RpoB) | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome 1 | CDS | 1694259 | 3360 | - | 0.686905 | |
| TTHA1876 | probable repressor, phenylacetic acid catabolic pathway | SubName: Full=Probable repressor, phenylacetic acid catabolic pathway; | chromosome 1 | CDS | 1762088 | 783 | + | 0.707535 | |
| TTHA1908 | conserved hypothetical protein | RecName: Full=Alpha-aminoadipate carrier protein LysW; AltName: Full=AAA carrier protein LysW; | chromosome 1 | CDS | 1792681 | 165 | - | 0.678788 | |
| TTHA1964 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 1840001 | 495 | - | 0.737374 | |
| TTHA1969 | chromosome partitioning protein, ParB family | SubName: Full=Chromosome partitioning protein, ParB family; | chromosome 1 | CDS | 1844044 | 810 | - | 0.725926 | |
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