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2024-06-01 22:28:51

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome II

Number of genes found: 9

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Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PSHAb0230 putative secreted protein similar to a protein present in D. psychrophilaSubName: Full=Putative secreted protein similar to a protein present in D. psychrophila; chromosome II CDS269557 819 - 0.400488
NA PSHAb0351 putative acetyltransferaseSubName: Full=Putative acetyltransferase; chromosome II CDS409879 507 + 0.351085
NA PSHAb0038 putative protein with Class I peptide chain release factor domain and peptidyl-tRNA hydrolase domainSubName: Full=Putative uncharacterized protein; chromosome II CDS43165 414 - 0.413043
NA PSHAb0516 putative cold-shock RNA methyltransferaseSubName: Full=Putative cold-shock RNA methyltransferase; chromosome II CDS583326 513 + 0.432749
hisS PSHAb0137 histidine tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome II CDS170009 1281 - 0.434817
rhlE PSHAb0411 putative ATP-dependent RNA helicase with P-loop hydrolase domain; DEAD-box protein familySubName: Full=Putative ATP-dependent RNA helicase with P-loop hydrolase domain DEAD-box protein family; chromosome II CDS467541 1302 + 0.417051
rluC PSHAb0436 putative ribosomal RNA pseudouridine synthaseRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome II CDS494462 984 + 0.372967
rnd PSHAb0503 putative RNase D, processing tRNA precursorsRecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; chromosome II CDS568869 1131 + 0.365164
rpmJ PSHAb0382 50S ribosomal protein L36 (Ribosomal protein B)RecName: Full=50S ribosomal protein L36; chromosome II CDS447113 135 - 0.407407