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2024-06-02 02:43:35

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome 1

Number of genes found: 15

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA3580 Putative Methionyl-tRNA formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome 1 CDS211782 945 + 0.468783
NA PBPRA3542 putative ATP-dependent RNA helicase, DEAD boxfamilyRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome 1 CDS170838 1314 + 0.456621
NA PBPRA3409 putative ribosomal protein L11 methyltransferaseRecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; chromosome 1 CDS26512 954 + 0.442348
NA PBPRA3488 putative D-tyrosyl-tRNA(Tyr) deacylaseRecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; chromosome 1 CDS109138 438 - 0.442922
NA PBPRA3436 putative ribosomal protein L11RecName: Full=50S ribosomal protein L11; chromosome 1 CDS56732 429 - 0.473193
EBIG1350 PBPRA3579 Putative polypeptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome 1 CDS211256 510 + 0.431373
PLU4736 PBPRA3465 putative tRNA (uracil-5-)-methyltransferaseRecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; chromosome 1 CDS85523 1107 + 0.411924
RPLA PBPRA3435 putative ribosomal protein L1RecName: Full=50S ribosomal protein L1; chromosome 1 CDS56026 702 - 0.437322
RPLJ PBPRA3434 putative ribosomal protein L10RecName: Full=50S ribosomal protein L10; chromosome 1 CDS55275 558 - 0.464158
SF3418 PBPRA3483 putative heat shock protein 15RecName: Full=Heat shock protein 15; chromosome 1 CDS102655 411 + 0.435523
SO0217 PBPRA3439 putative GTPase-translation elongation factorRecName: Full=Elongation factor Tu 2; Short=EF-Tu 2; chromosome 1 CDS58437 1209 - 0.45244
SO0223 PBPRA3433 putative ribosomal protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome 1 CDS54849 390 - 0.438462
T4096 PBPRA3581 Putative Sun proteinSubName: Full=Putative Sun protein; chromosome 1 CDS212797 1296 + 0.473765
VV3138 PBPRA3410 putative Dihydrouridine synthaseRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome 1 CDS27638 966 + 0.47205
YRDC PBPRA3573 Putative Sua5/YciO/YrdC family proteinRecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; chromosome 1 CDS206458 579 - 0.426598