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2024-06-02 10:11:26

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome 1

Number of genes found: 19

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA3067 putative alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome 1 CDS17873 2721 - 0.442117
NA PBPRA3138 putative glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; chromosome 1 CDS90198 948 + 0.432489
NA PBPRA3236 putative 30S ribosomal subunit protein S9RecName: Full=30S ribosomal protein S9; chromosome 1 CDS188373 408 - 0.448529
NA PBPRA3169 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS113977 630 + 0.452381
NA PBPRA3377 putative lysyl-tRNA synthetase-related proteinRecName: Full=Elongation factor P--(R)-beta-lysine ligase; Short=EF-P--(R)-beta-lysine ligase; EC=6.3.1.-; AltName: Full=EF-P post-translational modification enzyme A; AltName: Full=EF-P-lysine lysyltransferase; chromosome 1 CDS333877 972 - 0.449588
CBU1602 PBPRA3386 putative ribosomal protein S6 modification proteinRecName: Full=Probable alpha-L-glutamate ligase; EC=6.3.2.-; chromosome 1 CDS344244 906 + 0.443709
HD1407 PBPRA3382 putative elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome 1 CDS338956 585 - 0.425641
RPL13 PBPRA3237 putative 50S ribosomal protein L13RecName: Full=50S ribosomal protein L13; chromosome 1 CDS188781 429 - 0.44289
RPLI PBPRA3336 putative Ribosomal protein L9RecName: Full=50S ribosomal protein L9; chromosome 1 CDS301457 453 - 0.437086
RPSR PBPRA3337 putative ribosomal protein S18RecName: Full=30S ribosomal protein S18; chromosome 1 CDS301947 228 - 0.438596
S0138 PBPRA3173 putative polyA polymeraseRecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; chromosome 1 CDS117176 1350 + 0.442963
SO4094 PBPRA3266 putative ribonucleases G and ESubName: Full=Putative ribonucleases G and E; chromosome 1 CDS217358 1470 - 0.434014
STY0210 PBPRA3172 putative glutamyl-tRNA synthetase-relatedproteinRecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; chromosome 1 CDS116068 933 + 0.429796
T3238 PBPRA3256 putative sigma-54 modulation proteinSubName: Full=Putative sigma-54 modulation protein; chromosome 1 CDS205424 294 + 0.37415
VP2566 PBPRA3083 putative TrmA family RNA methyltransferaseRecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; chromosome 1 CDS38197 1416 - 0.41596
VV2972 PBPRA3325 putative NifR3/Smm1 family proteinRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome 1 CDS289271 1041 - 0.436119
VV2984 PBPRA3339 putative ribosomal protein S6RecName: Full=30S ribosomal protein S6; chromosome 1 CDS302501 444 - 0.475225
VV3072 PBPRA3351 putative tRNA delta(2)-isopentenylpyrophosphate transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome 1 CDS314877 936 - 0.452991
YJFH PBPRA3340 putative RNA methyltransferase, TrmH familyRecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; chromosome 1 CDS303174 738 - 0.451219