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2024-06-10 00:48:59

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome 1

Number of genes found: 21

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Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA2965 putative ribosome recycling factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome 1 CDS263014 558 - 0.410394
NA PBPRA3038 putative ribosomal protein L19RecName: Full=50S ribosomal protein L19; chromosome 1 CDS346495 360 - 0.461111
NA PBPRA2967 putative elongation factor TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome 1 CDS264536 921 - 0.442997
HEMK PBPRA2844 putative HemK protein, Methylase of polypeptide chain release factorsRecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome 1 CDS157562 849 - 0.466431
ISPLU9A PBPRA2979 hypothetical Tn5 transposaseSubName: Full=Hypothetical Tn5 transposase; chromosome 1 CDS277306 1386 + 0.409812
PLU0671 PBPRA2969 putative methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome 1 CDS266557 828 + 0.42029
PLU1257 PBPRA3041 putative ribosomal protein S16RecName: Full=30S ribosomal protein S16; chromosome 1 CDS348224 252 - 0.488095
PRFA PBPRA2845 putative peptide chain release factor ARecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome 1 CDS158410 1089 - 0.44169
PROS PBPRA2944 putative prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome 1 CDS238398 1716 + 0.461538
RIMM PBPRA3040 putative 16S rRNA processing protein RimMRecName: Full=Ribosome maturation factor RimM; chromosome 1 CDS347661 534 - 0.455056
RLUD PBPRA3021 putative ribosomal large subunit pseudouridine synthase DRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome 1 CDS327525 975 - 0.447179
S0162 PBPRA2968 putative 30S ribosomal protein S2RecName: Full=30S ribosomal protein S2; chromosome 1 CDS265502 729 - 0.434842
S0661 PBPRA2885 putative leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome 1 CDS179444 2577 + 0.43539
SF1207 PBPRA2850 putative peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome 1 CDS163988 591 + 0.431472
SMU.1308 PBPRA3031 putative translation initiation inhibitor, yjgF familySubName: Full=Putative translation initiation inhibitor, yjgF family; chromosome 1 CDS338271 381 + 0.388451
STY0716 PBPRA2878 putative 2-methylthioadenine synthetaseRecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome 1 CDS172035 1425 + 0.449825
STY2853 PBPRA3023 hypothetical sigma-54 modulation proteinSubName: Full=Hypothetical sigma-54 modulation protein; chromosome 1 CDS329811 351 + 0.407407
TRMD PBPRA3039 putative tRNA (guanine-N1)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome 1 CDS346885 750 - 0.457333
VP0750 PBPRA2720 putative 16S rRNA uridine-516 pseudouridylate synthaseRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome 1 CDS19420 1119 - 0.451296
VV2561 PBPRA2973 putative pseudouridine synthase Rlu family proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome 1 CDS271347 738 - 0.429539
YCHF PBPRA2851 putative GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome 1 CDS164682 1092 + 0.435897