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2024-06-10 00:25:20

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome 1

Number of genes found: 15

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA1183 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS287804 585 + 0.418803
NA PBPRA1064 putative arginyl-tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome 1 CDS138200 1731 - 0.44714
NA PBPRA1153 putative initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome 1 CDS251158 219 - 0.43379
PA1766 PBPRA1106 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome 1 CDS183697 987 - 0.441743
RLUC PBPRA1187 putative 23S rRNA ribosomal pseudouridinesynthaseRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome 1 CDS294764 924 + 0.422078
RND PBPRA1076 hypothetical ribonuclease DRecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; chromosome 1 CDS152330 1125 + 0.394667
S0465 PBPRA1098 putative cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase 1; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase 1; Short=CysRS 1; chromosome 1 CDS173705 1395 + 0.422939
S0624 PBPRA1034 putative glutaminyl-tRNA synthetaseRecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; chromosome 1 CDS107291 1668 + 0.404676
SERS PBPRA1165 Putative seryl-tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome 1 CDS266616 1293 + 0.45321
SF1876 PBPRA1112 Putative aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome 1 CDS190202 1794 + 0.444816
SO2780 PBPRA1191 putative ribosomal protein L32 (rpL32)RecName: Full=50S ribosomal protein L32; chromosome 1 CDS298041 171 + 0.491228
T1734 PBPRA1186 Putative ribonuclease ERecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; chromosome 1 CDS291002 3303 - 0.447775
VV2326 PBPRA1148 putative pseudouridine synthase family 1proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome 1 CDS245105 651 - 0.453149
YCFB PBPRA1147 putative(5-methylaminomethyl-2-thiouridylate)-me thyltransferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome 1 CDS243646 1134 - 0.421517
YFCB PBPRA0967 putative adenine-specific methylaseRecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; chromosome 1 CDS26821 933 + 0.434084