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2024-06-17 10:14:07

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome 1

Number of genes found: 40

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA0323 putative ribosomal protein L2RecName: Full=50S ribosomal protein L2; chromosome 1 CDS334566 828 + 0.472222
NA PBPRA0319 putative ribosomal protein S10RecName: Full=30S ribosomal protein S10; chromosome 1 CDS332677 312 + 0.467949
NA PBPRA0286 putative tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; chromosome 1 CDS300504 1020 + 0.441176
NA PBPRA0344 putative ribosomal protein S4RecName: Full=30S ribosomal protein S4; chromosome 1 CDS344255 609 + 0.458128
NA PBPRA0320 putative ribosomal protein L3RecName: Full=50S ribosomal protein L3; chromosome 1 CDS333001 630 + 0.461905
BPP0053 PBPRA0341 putative ribosomal protein L36RecName: Full=50S ribosomal protein L36; chromosome 1 CDS343192 114 + 0.421053
GLYQ PBPRA0056 Putative glycyl-tRNA synthetase, alpha chainSubName: Full=Putative glycyl-tRNA synthetase, alpha chain; chromosome 1 CDS56087 966 - 0.445135
GLYS PBPRA0055 Putative glycyl-tRNA synthetase, beta chainRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; chromosome 1 CDS54008 2070 - 0.443961
HD1953 PBPRA0343 putative ribosomal protein S11RecName: Full=30S ribosomal protein S11; chromosome 1 CDS343826 390 + 0.484615
HD1961 PBPRA0337 putative ribosomal subunit protein S5RecName: Full=30S ribosomal protein S5; chromosome 1 CDS340694 498 + 0.453815
PLU0431 PBPRA0315 putative elongation factor GRecName: Full=Elongation factor G 1; Short=EF-G 1; chromosome 1 CDS327935 2097 + 0.440153
PLU4710 PBPRA0336 putative ribosomal protein L18RecName: Full=50S ribosomal protein L18; chromosome 1 CDS340327 354 + 0.502825
PLU4712 PBPRA0334 putative ribosomal protein S8RecName: Full=30S ribosomal protein S8; chromosome 1 CDS339379 393 + 0.452926
PLU4713 PBPRA0333 putative ribosomal protein S14RecName: Full=30S ribosomal protein S14; chromosome 1 CDS339039 306 + 0.473856
PLU4714 PBPRA0332 putative ribosomal protein L5RecName: Full=50S ribosomal protein L5; chromosome 1 CDS338484 540 + 0.42963
PLU4720 PBPRA0326 putative ribosomal protein S3RecName: Full=30S ribosomal protein S3; chromosome 1 CDS336048 690 + 0.45942
PLU4864 PBPRA0203 putative ribosomal protein L28RecName: Full=50S ribosomal protein L28; chromosome 1 CDS212070 252 + 0.472222
PM1397 PBPRA0338 putative ribosomal protein L30/L7ERecName: Full=50S ribosomal protein L30; chromosome 1 CDS341188 189 + 0.428571
PM1400 PBPRA0335 putative ribosomal protein L6RecName: Full=50S ribosomal protein L6; chromosome 1 CDS339784 534 + 0.44382
PM1406 PBPRA0329 putative ribosomal protein S17RecName: Full=30S ribosomal protein S17; chromosome 1 CDS337350 255 + 0.427451
RNPA PBPRA0004 Putative RNase P protein componentRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome 1 CDS4097 357 - 0.434174
RPLO PBPRA0339 putative ribosomal protein L15RecName: Full=50S ribosomal protein L15; chromosome 1 CDS341382 435 + 0.482759
S3733 PBPRA0258 putative ribosomal protein L31RecName: Full=50S ribosomal protein L31; chromosome 1 CDS266433 213 + 0.422535
S4086 PBPRA0198 putative ribonuclease PHRecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; chromosome 1 CDS206991 717 + 0.474198
S4411 PBPRA0321 putative ribosomal protein L4RecName: Full=50S ribosomal protein L4; chromosome 1 CDS333646 603 + 0.45937
SF3645 PBPRA0229 putative rRNA methylase, SpoU familyRecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; chromosome 1 CDS236446 480 - 0.460417
SO0227 PBPRA0314 putative ribosomal protein S7RecName: Full=30S ribosomal protein S7; chromosome 1 CDS327386 471 + 0.458599
SO0233 PBPRA0322 putative ribosomal protein L23RecName: Full=50S ribosomal protein L23; chromosome 1 CDS334245 303 + 0.432343
SO0235 PBPRA0324 putative ribosomal protein S19RecName: Full=30S ribosomal protein S19; chromosome 1 CDS335411 279 + 0.480287
SO0236 PBPRA0325 putative ribosomal protein L22RecName: Full=50S ribosomal protein L22; chromosome 1 CDS335700 333 + 0.45045
SO4246 PBPRA0204 putative ribosomal protein L33RecName: Full=50S ribosomal protein L33; chromosome 1 CDS212336 168 + 0.410714
STY4365 PBPRA0327 putative ribosomal protein L16RecName: Full=50S ribosomal protein L16; chromosome 1 CDS336749 411 + 0.459854
STY4368 PBPRA0330 putative ribosomal protein L14RecName: Full=50S ribosomal protein L14; chromosome 1 CDS337769 372 + 0.473118
TUFB PBPRA0316 putative translation elongation factor TU (EF-Tu-B)RecName: Full=Elongation factor Tu 1; Short=EF-Tu 1; chromosome 1 CDS330133 1185 + 0.454008
VV0383 PBPRA0328 putative ribosomal protein L29RecName: Full=50S ribosomal protein L29; chromosome 1 CDS337156 195 + 0.466667
VV0396 PBPRA0342 putative ribosomal protein S13RecName: Full=30S ribosomal protein S13; chromosome 1 CDS343450 357 + 0.45098
VV3032 PBPRA0313 putative ribosomal protein S12RecName: Full=30S ribosomal protein S12; chromosome 1 CDS326919 375 + 0.464
Y0104 PBPRA0188 putative tRNA methyltransferaseSubName: Full=Putative tRNA methyltransferase; chromosome 1 CDS194046 804 - 0.456468
Y4000 PBPRA0331 putative ribosomal protein L24RecName: Full=50S ribosomal protein L24; chromosome 1 CDS338152 315 + 0.4
Y4016 PBPRA0346 putative ribosomal protein L17RecName: Full=50S ribosomal protein L17; chromosome 1 CDS345910 384 + 0.481771