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2024-06-07 08:13:04

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome

Number of genes found: 116

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Mycoplasma capricolum subsp. capricolum ATCC 27343, ATCC 27343
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA MCAP_0462 RNA methyltransferase, TrmH familySubName: Full=RNA methyltransferase, TrmH family; EC=2.1.1.-; chromosome CDS552903 768 - 0.252604
NA MCAP_0145 modification methylase, HemK familySubName: Full=Modification methylase, HemK family; chromosome CDS174332 813 + 0.188192
NA MCAP_0111 RNA methyltransferase, TrmH family, group 3SubName: Full=RNA methyltransferase, TrmH family, group 3; EC=2.1.1.-; chromosome CDS130252 735 + 0.216327
NA MCAP_0714 ribosomal large subunit pseudouridine synthase, RluA familyRecName: Full=Uncharacterized RNA pseudouridine synthase MCAP_0714; EC=5.4.99.-; AltName: Full=ORF2; AltName: Full=RNA pseudouridylate synthase; AltName: Full=RNA-uridine isomerase; chromosome CDS829755 909 - 0.187019
NA MCAP_0688 ribosomal protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS809033 417 - 0.297362
NA MCAP_0165 oligopeptide ABC transporter, oligopeptide-binding protein, putativeSubName: Full=Oligopeptide ABC transporter, oligopeptide-binding protein, putative; chromosome CDS201742 3108 + 0.26834
NA MCAP_0334 ribosomal protein L7A familySubName: Full=Ribosomal protein L7A family; chromosome CDS398931 300 - 0.233333
NA MCAP_0395 ribosomal large subunit pseudouridine synthase, RluA familyRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS487883 969 + 0.240454
NA MCAP_0734 endoribonuclease L-PSP, putativeSubName: Full=Endoribonuclease L-PSP, putative; chromosome CDS855520 402 + 0.248756
NA MCAP_0055 hemolysin ASubName: Full=Hemolysin A; chromosome CDS68672 810 - 0.217284
NA MCAP_0147 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS176671 501 + 0.193613
NA MCAP_0007 cytidine/deoxycytidylate deaminase zinc-binding domain proteinSubName: Full=Cytidine/deoxycytidylate deaminase zinc-binding domain protein; chromosome CDS5328 444 + 0.186937
NA MCAP_0211 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS255250 810 + 0.276543
NA MCAP_0209 rRNA methyltransferase RsmB (sun protein), putativeSubName: Full=rRNA methyltransferase RsmB (Sun protein), putative; EC=2.1.1.-; chromosome CDS251853 1287 + 0.200466
NA MCAP_0364 RNA methyltransferase, TrmH familyRecName: Full=Putative tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase; chromosome CDS450199 546 + 0.254579
NA MCAP_0665 tRNA pseudouridine synthase A, putativeRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS795151 750 - 0.2
NA MCAP_0600 ribosomal large subunit pseudouridine synthase BSubName: Full=Ribosomal large subunit pseudouridine synthase B; chromosome CDS713913 759 - 0.225296
NA MCAP_0413 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS500454 315 + 0.222222
NA MCAP_0322 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS385973 804 + 0.225124
NA MCAP_0500 ATP-dependent RNA helicase, DEAD-DEAH box familySubName: Full=ATP-dependent RNA helicase, DEAD-DEAH box family; chromosome CDS597343 1362 - 0.212922
NA MCAP_0613 glucose-inhibited division protein, putativeRecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO 2; EC=2.1.1.74; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase 2; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase 2; chromosome CDS727710 1272 - 0.198113
NA MCAP_0326 tRNA pseudouridine synthase B, putativeRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS390352 879 + 0.205916
NA MCAP_0546 16S rRNA processing protein RimM, putativeRecName: Full=Ribosome maturation factor RimM; chromosome CDS654547 495 - 0.187879
alaS MCAP_0159 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS192390 2691 - 0.240803
argS MCAP_0376 arginyl-tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS462557 1665 + 0.233634
asnS MCAP_0824 asparaginyl-tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome CDS951095 1365 + 0.286447
aspS MCAP_0323 aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome CDS386797 1728 - 0.246528
cysS MCAP_0110 cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS128925 1326 + 0.202866
def MCAP_0206 polypeptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS249761 603 - 0.242123
dus MCAP_0837 tRNA-dihydrouridine synthaseRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS968067 927 - 0.292341
efp MCAP_0519 translation elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS627543 555 - 0.300901
engD MCAP_0805 GTP-dependent nucleic acid-binding protein engDRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS929506 1095 - 0.274886
fmt MCAP_0520 methionyl-tRNA formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS628187 954 - 0.233753
frr MCAP_0375 ribosome recycling factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS462007 549 + 0.251366
fusA MCAP_0153 translation elongation factor GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS181679 2070 + 0.319807
gatA MCAP_0710 glutamyl-tRNA(Gln) amidotransferase, A subunitSubName: Full=Glutamyl-tRNA(Gln) amidotransferase, A subunit; EC=6.3.5.-; chromosome CDS823987 1458 - 0.260631
gatB MCAP_0709 glutamyl-tRNA(Gln) amidotransferase, B subunitRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; chromosome CDS822546 1440 - 0.230556
gatC MCAP_0711 glutamyl-tRNA(Gln) amidotransferase, C subunit,SubName: Full=Glutamyl-tRNA(Gln) amidotransferase, C subunit; EC=6.3.5.-; chromosome CDS825444 297 - 0.249158
gid MCAP_0476 glucose inhibited division proteinRecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO 1; EC=2.1.1.74; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase 1; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase 1; chromosome CDS568919 1317 - 0.252847
gltX MCAP_0130 glutamyl-tRNA synthetaseRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS156937 1452 + 0.235537
glyS MCAP_0505 glycyl-tRNA synthetaseRecName: Full=Glycine--tRNA ligase; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase; Short=GlyRS; chromosome CDS603527 1371 - 0.243618
hisS MCAP_0324 His-tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS388533 1245 - 0.225703
ileS MCAP_0393 isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; chromosome CDS484559 2727 + 0.249725
infA MCAP_0674 translation initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS801495 225 - 0.346667
infB MCAP_0333 translation initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS397049 1863 - 0.277509
infC MCAP_0205 translation initiation factor IF-3RecName: Full=Translation initiation factor IF-3; chromosome CDS249027 546 - 0.269231
ksgA MCAP_0004 dimethyladenosine transferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS3214 801 + 0.193508
leuS MCAP_0659 leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS784221 2415 - 0.26501
lysS MCAP_0836 lysyl-tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS966562 1503 - 0.280106
map MCAP_0675 methionine aminopeptidase, type IRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS801731 756 - 0.292328
metG MCAP_0035 methionyl-tRNA synthetaseRecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; chromosome CDS40240 1530 + 0.233987
pheS MCAP_0383 phenylalanyl-tRNA synthetase, alpha subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS474483 1053 + 0.223172
prfA MCAP_0144 peptide chain release factor 1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS173248 1092 + 0.285714
proS MCAP_0318 prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS381276 1314 + 0.243531
pth MCAP_0105 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS124048 561 + 0.199643
rbfA MCAP_0325 ribosome-binding factor ASubName: Full=Ribosome-binding factor A; chromosome CDS389949 354 + 0.223164
rnpA MCAP_0869 ribonuclease P protein componentRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS1009258 330 - 0.193939
rplA MCAP_0066 ribosomal protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS77860 681 + 0.293686
rplB MCAP_0693 50S ribosomal protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS811231 846 - 0.330969
rplC MCAP_0696 50 ribosomal protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS813052 672 - 0.315476
rplD MCAP_0695 50S ribosomal protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS812413 627 - 0.296651
rplE MCAP_0684 ribosomal protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS807491 543 - 0.268877
rplF MCAP_0681 50S ribosomal protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS806320 543 - 0.289134
rplI MCAP_0106 50S ribosomal protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS124739 444 + 0.231982
rplJ MCAP_0067 50S ribosomal protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS78769 498 + 0.313253
rplK MCAP_0065 50S ribosomal protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS77432 429 + 0.319347
rplL MCAP_0068 50S ribosomal protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome CDS79342 369 + 0.336043
rplM MCAP_0663 50S ribosomal protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS790306 456 - 0.291667
rplN MCAP_0686 ribosomal protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS808392 369 - 0.325203
rplO MCAP_0678 50S ribosomal protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS804704 438 - 0.30137
rplP MCAP_0689 ribosomal protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS809449 414 - 0.333333
rplQ MCAP_0669 50S ribosomal protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS799158 360 - 0.283333
rplR MCAP_0680 50S ribosomal protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS805944 351 - 0.270655
rplS MCAP_0544 50S ribosomal protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS653429 393 - 0.26972
rplT MCAP_0203 50S ribosomal protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS248432 360 - 0.275
rplU MCAP_0412 50 ribosomal protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS500149 303 + 0.283828
rplV MCAP_0691 ribosomal protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS810584 336 - 0.291667
rplW MCAP_0694 50S ribosomal protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS812129 285 - 0.245614
rplX MCAP_0685 ribosomal protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS808052 327 - 0.302752
rpmA MCAP_0414 50S ribosomal protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS500770 282 + 0.312057
rpmB MCAP_0488 50S ribosomal protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS580246 198 - 0.30303
rpmE MCAP_0140 ribosomal protein L31RecName: Full=50S ribosomal protein L31; chromosome CDS169372 279 + 0.326165
rpmF MCAP_0386 50S ribosomal protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS478458 180 + 0.311111
rpmG MCAP_0112 50S ribosomal protein L33RecName: Full=50S ribosomal protein L33 2; chromosome CDS131047 162 + 0.283951
rpmH MCAP_0870 50S ribosomal protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS1009594 135 - 0.325926
rpmI MCAP_0204 50S ribosomal protein L35RecName: Full=50S ribosomal protein L35; chromosome CDS248810 192 - 0.291667
rpmJ MCAP_0673 50S ribosomal protein L36RecName: Full=50S ribosomal protein L36; chromosome CDS801312 114 - 0.350877
rpsB MCAP_0371 30S ribosomal protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS458769 876 + 0.283105
rpsC MCAP_0690 ribosomal protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS809865 702 - 0.287749
rpsD MCAP_0237 30S ribosomal protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS285801 627 - 0.264753
rpsE MCAP_0679 30S ribosomal protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS805161 765 - 0.301961
rpsF MCAP_0024 30S ribosomal protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS28783 414 + 0.246377
rpsG MCAP_0152 30S ribosomal protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS181185 468 + 0.273504
rpsH MCAP_0682 ribosomal protein S8RecName: Full=30S ribosomal protein S8; chromosome CDS806876 390 - 0.3
rpsI MCAP_0662 30S ribosomal protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS789908 399 - 0.333333
rpsJ MCAP_0697 30S ribosomal protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS813798 309 - 0.31068
rpsK MCAP_0671 30S ribosomal protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS800494 390 - 0.364103
rpsL MCAP_0151 30S ribosomal protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS180658 438 + 0.344749
rpsM MCAP_0672 30S ribosomal protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS800909 366 - 0.297814
rpsN MCAP_0683 ribosomal protein S14p/S29eRecName: Full=30S ribosomal protein S14 type Z; chromosome CDS807287 186 - 0.295699
rpsO MCAP_0330 30S ribosomal protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS395895 267 + 0.247191
rpsP MCAP_0547 30S ribosomal protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS655059 327 - 0.256881
rpsQ MCAP_0687 ribosomal protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS808776 258 - 0.25969
rpsR MCAP_0026 30S ribosomal protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS29671 228 + 0.241228
rpsS MCAP_0692 30S ribosomal protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS810943 267 - 0.303371
rpsT MCAP_0818 30S ribosomal protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS945932 246 + 0.260163
rpsU MCAP_0430 30S Ribosomal protein S21SubName: Full=30S Ribosomal protein S21; chromosome CDS516022 183 - 0.289617
serS MCAP_0839 seryl-tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS969451 1269 - 0.260835
thrS MCAP_0222 threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; chromosome CDS266899 1920 + 0.235417
trmD MCAP_0545 tRNA (guanine-N1)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS653823 723 - 0.236515
trmU MCAP_0523 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS632010 1128 - 0.234043
trpS MCAP_0342 tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; chromosome CDS409342 1011 + 0.248269
tsf MCAP_0372 translation elongation factor TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS459656 888 + 0.275901
tuf MCAP_0154 translation elongation factor TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS183880 1188 + 0.357744
tyrS MCAP_0639 tyrosyl-tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS768010 1245 - 0.245783
valS MCAP_0258 valyl-tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; chromosome CDS313797 2619 - 0.228713